RchiOBHm_Chr2g0106821

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000413
Physical Location & Seq
Reverse (-)
18215045 .. 18218063
3019 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48089

Sequence Viewer

Length: 2505 bp
ATGGAAATTCTTCAACAAAAGGGCAGAGTCCATGTCCCCATATGTTGTCTGCTTGTTTTTCTCATCCAATTCTCAAACCTTTACTTTCTCTCTTTCGCTGATGATTACTACATCAATTGTGGCTCGGATGCTAATGTGAACCTCACTACTGGCCAGAATTTCGTTGGAGACTCGAATTCTGGTTCCTCTTTTTCCAAAAGCGACGCCATCACATACATGAACCAGTTGCCAGCTTCAGTATCGCCTCTCTACCAGACAGCTAGAGCTTCCAGTGATCCTTTCTACTATCAGTTCAAGATCACTATTGGTACTTATCTGGTACGCCTACATTTCTTGGCTTTTTCTTCCACCTCAAGTAATCTGTCCTCAGCTGTTTTTGATGTTTTGGATTCTACAAAGTTCAAACTGTTGAACAATTTCACTGCCAAGAATAGTACTAGTTCTCCTTTGATAAAGGAGTTCTTTATCAGAATTGATAGTACTGGCTCATTTAGGCTGTATTTTACACCCCGGACATCATCTTTGGCATTTGTAAATGCCATTGAATTCTTCGCCATCCCTTCAGATTTCACCAACTTCATCCCTGAGGATTACACTGGTAATTTCCCTTTACAGACAATTTACAGAGTGAATGTTGGGGGCCCTTCACAAAATGATACATTGTGGAGAAGCTGGGAAACAGATGACACTTACCTGCCTGATCCAAACTCTGCTAAGGATAGCAACAAAGGTACCCTCAATAGGAATTACGTCGGAGAAATTGATGGTTTGGTTGCATCTAATGCGTCTGTTGCCCCAGATTGGGTTTACCAGACTGCTAAAGTGATGAATATCACTGCTAGCAGGCCAGCCAATTCCTCCAGCATAACTTGGTCTTTTAGAGTGAGTGGGAATGCTAGACATATTGTCCGGGCTCACTTCTGTGACATTGTTGGTCAGCCCTATAATGTTGTATTTAACTTGTATTCCAATGGCAACTTGCGCAAGGAGATTGGTAGCAGCAATAACACGATTTCTGGACTTTCAGCCCTTCCTTTCTACTATGATTTTATGGTGAGTCCTAGTGAGTCTGAACTCATTAACATCAGCATAAGACCTAACTTGGAAGATGCTACAGATCTGAATGCATTTCTAAATGGGCTAGAAATATTGGAGATAATGGAGGGTGTAGCTTCAATTCCTAATGTGAAAGAGTCCAAGAAGAATATGGTGGCTCTTGTTGTTGGTTCAGTTCTTGGAGGCTTGTCACTTATCTGCATTTTAGTAGCTGGATTTGTGTTCTGTTCGAGACACAGAAAGGTAGAAAAGCAAGTTGAAATTGCAGATTGGTCACCAATGCTTGAAAATGGAGGGAGCTCCTACAGCAGAGGGACCGAAAGAACCATCACTGTATCGCCTATGAATCTAATGAATCTTGGGTTGAAGATACCTTTTGCTGAAATTCAGTCTGCAACAAACAAGTTTGACACCAAATTGATGATAGGTAAGGGTGGCTTCGGGAACGTTTATAGAGGGACTCTATTGAATGGCACAAAAGTGGCTGTAAAGCGAGCTTATAAGCGAGATGAGCATGGGTCAGGATCAGGCCAAGGCCGTCCAGAATTTCAAACAGAGATTATGGTGTTGTCCAAGATTCGCCACCGCCATCTTGTGTCCTTAATTGGTTACTGTGATGAAAGGTCTGAGATGATACTAGTCTATGAGTTCATGGAAAAGGGGACCTTGAGAGACCATTTGTATGATTCGAACTTGCCTCGCTTGACATGGAAGCAAAGACTTGAAATTTGTACTGGAGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGGGAATCATTCACCGAGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTCGCCAAAGTTGCTGACTTTGGGCTTTCAAGATCTGGACCTCTCGATGAAACCCATGTCAGCACAAATGTCAAAGGCACTTTTGGTTACCTTGATCCTGAGTACATGATGTCTGAACAGCTGACAGAAAAATCTGATGTTTACTCATTTGGTGTTGTTCTTCTTGAGGTGTTATGTGGAAGACCTGCTATTGATCCAACACTTCCAAGAGAGCAAATGAATTTAGCTGAATGGGGAATGCTGTGCAAGAAAAAAGGGTTGCTTGAACAGATTGTTGATTCTCCATTGAAAAATCAGATTAATCCTAGCTCACTGAGAAAGTTCAGTGATACAGTTGAGAAGTGTTTGCAAGAAGATGCTTCTGATAGGCCAACAATGGCCGATGTGCTGTGGGATTTGGAGTATGCATTACAGCTTCAGCAAACAACAACGCTTAAAGAGGCTCATGAGGACAGCACAACAATTGATGCTTCATCAGCAGCATATCGTTTGCCAGTTGTTCAACGCTTTCCTTCACTTGGTTCGACCATAAATGGAGATGATATGAGAGACGACGAATTAGACACAACAGAAAATGAAATTTTCTCTGAATTGAAAATTGGTGATGCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

834

Amino Acids

92.73

Weight (kDa)

5.53

Isoelectric Point (pI)

37.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 36 - 129 6e-08 Malectin domain
Pkinase PF00069 491 - 760 4.2e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 492 - 761 4.4e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1557
Acc16I TGCGCA 1 cut(s) 983
Acc36I ACCTGC 2 cut(s) 702, 2083
Acc65I GGTACC 1 cut(s) 731
AccB1I GGYRCC 1 cut(s) 731
AciI CCGC 1 cut(s) 1642
AclI AACGTT 1 cut(s) 1503
AclWI GGATC 5 cut(s) 269, 695, 1588, 1979, 2078
AcoI YGGCCR 2 cut(s) 151, 2268
AcsI RAATTY 9 cut(s) 6, 157, 175, 545, 1440, 1601, 1782, 2110, 2469
AcuI CTGAAG 3 cut(s) 219, 546, 2291
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 7 cut(s) 310, 321, 436, 481, 733, 1789, 1994
AfiI CCNNNNNNNGG 4 cut(s) 741, 801, 802, 2408
AhdI GACNNNNNGTC 1 cut(s) 905
AhlI ACTAGT 2 cut(s) 437, 1693
AjuI GAANNNNNNNTTGG 2 cut(s) 2472, 2504
AleI CACNNNNGTG 3 cut(s) 921, 1535, 1824
Alw21I GWGCWC 1 cut(s) 1358
Alw26I GTCTC 4 cut(s) 162, 1282, 1722, 2433
AlwI GGATC 5 cut(s) 269, 695, 1588, 1979, 2078
AoxI GGCC 7 cut(s) 151, 640, 845, 1585, 1591, 2258, 2268
ApaI GGGCCC 1 cut(s) 644
ApeKI GCWGC 4 cut(s) 999, 1796, 1829, 2369
ApoI RAATTY 9 cut(s) 6, 157, 175, 545, 1440, 1601, 1782, 2110, 2469
ArsI GACNNNNNNTTYG 4 cut(s) 505, 537, 1767, 1799
AseI ATTAAT 1 cut(s) 2190
Asp700I GAANNNNTTC 2 cut(s) 9, 416
Asp718I GGTACC 1 cut(s) 731
AspLEI GCGC 1 cut(s) 984
AspS9I GGNCC 5 cut(s) 640, 641, 1371, 1719, 1928
AsuC2I CCSGG 2 cut(s) 511, 911
AsuHPI GGTGA 5 cut(s) 562, 1066, 1323, 1838, 2504
AsuII TTCGAA 1 cut(s) 1745
AsuNHI GCTAGC 1 cut(s) 839
AvaII GGWCC 3 cut(s) 1371, 1719, 1928
AxyI CCTNAGG 1 cut(s) 585
BaeGI GKGCMC 1 cut(s) 644
BaeI ACNNNNGTAYC 2 cut(s) 715, 748
BalI TGGCCA 1 cut(s) 153
BanI GGYRCC 1 cut(s) 731
BanII GRGCYC 3 cut(s) 644, 916, 1358
BbsI GAAGAC 2 cut(s) 1799, 2077
Bbv12I GWGCWC 1 cut(s) 1358
BbvCI CCTCAGC 1 cut(s) 367
BbvI GCAGC 4 cut(s) 1011, 1808, 1841, 2381
BccI CCATC 5 cut(s) 215, 563, 758, 1391, 1653
BceAI ACGGC 1 cut(s) 1578
BcnI CCSGG 2 cut(s) 511, 911
BcoDI GTCTC 4 cut(s) 162, 1282, 1722, 2433
BcuI ACTAGT 2 cut(s) 437, 1693
BfaI CTAG 8 cut(s) 261, 438, 840, 897, 1062, 1142, 1694, 2196
BfmI CTRYAG 2 cut(s) 1113, 1360
BfuAI ACCTGC 2 cut(s) 702, 2083
BglII AGATCT 2 cut(s) 1117, 1922
BisI GCNGC 4 cut(s) 1000, 1797, 1830, 2370
BlsI GCNGC 4 cut(s) 1001, 1798, 1831, 2371
BmcAI AGTACT 2 cut(s) 436, 481
Bme1390I CCNGG 2 cut(s) 511, 911
Bme18I GGWCC 3 cut(s) 1371, 1719, 1928
BmeRI GACNNNNNGTC 1 cut(s) 905
BmgT120I GGNCC 5 cut(s) 640, 641, 1371, 1719, 1928
BmiI GGNNCC 6 cut(s) 184, 641, 642, 733, 1372, 1720
BmrFI CCNGG 2 cut(s) 511, 911
BmsI GCATC 6 cut(s) 118, 785, 1099, 2236, 2347, 2485
BmtI GCTAGC 1 cut(s) 843
BpiI GAAGAC 2 cut(s) 1799, 2077
BpmI CTGGAG 2 cut(s) 844, 1812
Bpu10I CCTNAGC 2 cut(s) 367, 714
Bpu14I TTCGAA 1 cut(s) 1745
BpuEI CTTGAG 3 cut(s) 337, 1744, 2075
BpuMI CCSGG 2 cut(s) 511, 911
BsaBI GATNNNNATC 1 cut(s) 830
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 1 cut(s) 1722
BsaJI CCNNGG 2 cut(s) 509, 1588
BsaXI ACNNNNNCTCC 2 cut(s) 427, 457
Bsc4I CCNNNNNNNGG 4 cut(s) 741, 801, 802, 2408
Bse1I ACTGG 7 cut(s) 154, 223, 270, 487, 601, 1795, 2384
Bse21I CCTNAGG 1 cut(s) 585
Bse8I GATNNNNATC 1 cut(s) 830
BseDI CCNNGG 2 cut(s) 509, 1588
BseGI GGATG 4 cut(s) 63, 133, 555, 579
BseJI GATNNNNATC 1 cut(s) 830
BseLI CCNNNNNNNGG 4 cut(s) 741, 801, 802, 2408
BseMII CTCAG 5 cut(s) 381, 576, 1674, 1980, 2195
BseNI ACTGG 7 cut(s) 154, 223, 270, 487, 601, 1795, 2384
BseSI GKGCMC 1 cut(s) 644
BseXI GCAGC 4 cut(s) 1011, 1808, 1841, 2381
BseYI CCCAGC 2 cut(s) 672, 1832
BsgI GTGCAG 1 cut(s) 1848
BshFI GGCC 7 cut(s) 153, 642, 847, 1587, 1593, 2260, 2270
BshNI GGYRCC 1 cut(s) 731
BsiHKAI GWGCWC 1 cut(s) 1358
BsiSI CCGG 2 cut(s) 511, 910
BslFI GGGAC 4 cut(s) 20, 1384, 1528, 1732
BslI CCNNNNNNNGG 4 cut(s) 741, 801, 802, 2408
BsmAI GTCTC 4 cut(s) 162, 1282, 1722, 2433
BsmBI CGTCTC 1 cut(s) 2433
BsmFI GGGAC 4 cut(s) 20, 1384, 1528, 1732
BsmI GAATGC 3 cut(s) 898, 1129, 2133
BsnI GGCC 7 cut(s) 153, 642, 847, 1587, 1593, 2260, 2270
Bso31I GGTCTC 1 cut(s) 1722
Bsp119I TTCGAA 1 cut(s) 1745
Bsp120I GGGCCC 1 cut(s) 640
Bsp1286I GDGCHC 3 cut(s) 644, 916, 1358
Bsp143I GATC 8 cut(s) 274, 297, 700, 1117, 1580, 1922, 1984, 2083
BspACI CCGC 1 cut(s) 1642
BspANI GGCC 7 cut(s) 153, 642, 847, 1587, 1593, 2260, 2270
BspCNI CTCAG 5 cut(s) 380, 577, 1675, 1981, 2196
BspHI TCATGA 1 cut(s) 2335
BspLI GGNNCC 6 cut(s) 184, 641, 642, 733, 1372, 1720
BspMI ACCTGC 2 cut(s) 702, 2083
BspOI GCTAGC 1 cut(s) 843
BspPI GGATC 5 cut(s) 269, 695, 1588, 1979, 2078
BspT104I TTCGAA 1 cut(s) 1745
BspT107I GGYRCC 1 cut(s) 731
BspTNI GGTCTC 1 cut(s) 1722
BsrI ACTGG 7 cut(s) 154, 223, 270, 487, 601, 1795, 2384
BssECI CCNNGG 2 cut(s) 509, 1588
BssMI GATC 8 cut(s) 274, 297, 700, 1117, 1580, 1922, 1984, 2083
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 1 cut(s) 1588
Bst4CI ACNGT 4 cut(s) 408, 1390, 1670, 2224
BstACI GRCGYC 1 cut(s) 204
BstAPI GCANNNNNTGC 1 cut(s) 782
BstBI TTCGAA 1 cut(s) 1745
BstC8I GCNNGC 5 cut(s) 231, 841, 845, 849, 1551
BstDEI CTNAG 6 cut(s) 367, 585, 714, 1683, 1989, 2204
BstEII GGTNACC 2 cut(s) 1329, 1976
BstF5I GGATG 4 cut(s) 63, 133, 555, 579
BstHHI GCGC 1 cut(s) 984
BstKTI GATC 8 cut(s) 277, 300, 703, 1120, 1583, 1925, 1987, 2086
BstMAI GTCTC 4 cut(s) 162, 1282, 1722, 2433
BstMBI GATC 8 cut(s) 274, 297, 700, 1117, 1580, 1922, 1984, 2083
BstMWI GCNNNNNNNGC 7 cut(s) 782, 791, 981, 1362, 1567, 1901, 2366
BstPI GGTNACC 2 cut(s) 1329, 1976
BstSCI CCNGG 2 cut(s) 509, 909
BstSFI CTRYAG 2 cut(s) 1113, 1360
BstSLI GKGCMC 1 cut(s) 644
BstV1I GCAGC 4 cut(s) 1011, 1808, 1841, 2381
BstV2I GAAGAC 2 cut(s) 1799, 2077
BstX2I RGATCY 2 cut(s) 1117, 1922
BstYI RGATCY 2 cut(s) 1117, 1922
Bsu36I CCTNAGG 1 cut(s) 585
BsuRI GGCC 7 cut(s) 153, 642, 847, 1587, 1593, 2260, 2270
BtsCI GGATG 4 cut(s) 63, 133, 555, 579
BtsI GCAGTG 2 cut(s) 420, 834
BtsIMutI CAGTG 7 cut(s) 277, 420, 594, 834, 1386, 2201, 2221
BveI ACCTGC 2 cut(s) 702, 2083
Cac8I GCNNGC 5 cut(s) 231, 841, 845, 849, 1551
CciI TCATGA 1 cut(s) 2335
CfoI GCGC 1 cut(s) 984
Cfr13I GGNCC 5 cut(s) 640, 641, 1371, 1719, 1928
CseI GACGC 2 cut(s) 212, 774
Csp6I GTAC 7 cut(s) 309, 320, 435, 480, 732, 1788, 1993
CviAII CATG 9 cut(s) 32, 217, 1571, 1708, 1764, 1889, 1946, 1996, 2336
CviQI GTAC 7 cut(s) 309, 320, 435, 480, 732, 1788, 1993
DdeI CTNAG 6 cut(s) 367, 585, 714, 1683, 1989, 2204
DpnI GATC 8 cut(s) 276, 299, 702, 1119, 1582, 1924, 1986, 2085
DpnII GATC 8 cut(s) 274, 297, 700, 1117, 1580, 1922, 1984, 2083
DriI GACNNNNNGTC 1 cut(s) 905
EaeI YGGCCR 2 cut(s) 151, 2268
Eam1105I GACNNNNNGTC 1 cut(s) 905
Ecl136II GAGCTC 1 cut(s) 1356
Eco130I CCWWGG 1 cut(s) 1588
Eco24I GRGCYC 3 cut(s) 644, 916, 1358
Eco31I GGTCTC 1 cut(s) 1722
Eco47I GGWCC 3 cut(s) 1371, 1719, 1928
Eco53kI GAGCTC 1 cut(s) 1356
Eco57I CTGAAG 3 cut(s) 219, 546, 2291
Eco81I CCTNAGG 1 cut(s) 585
Eco91I GGTNACC 2 cut(s) 1329, 1976
EcoICRI GAGCTC 1 cut(s) 1356
EcoO109I RGGNCCY 3 cut(s) 640, 641, 1719
EcoO65I GGTNACC 2 cut(s) 1329, 1976
EcoRI GAATTC 2 cut(s) 175, 545
EcoT14I CCWWGG 1 cut(s) 1588
EcoT22I ATGCAT 2 cut(s) 1129, 2299
EcoT38I GRGCYC 3 cut(s) 644, 916, 1358
ErhI CCWWGG 1 cut(s) 1588
Esp3I CGTCTC 1 cut(s) 2433
FaeI CATG 9 cut(s) 35, 220, 1574, 1711, 1767, 1892, 1949, 1999, 2339
FalI AAGNNNNNCTT 8 cut(s) 446, 478, 1478, 1510, 1706, 1738, 2136, 2168
FaqI GGGAC 4 cut(s) 20, 1384, 1528, 1732
FatI CATG 9 cut(s) 31, 216, 1570, 1707, 1763, 1888, 1945, 1995, 2335
FauNDI CATATG 1 cut(s) 41
Fnu4HI GCNGC 4 cut(s) 1000, 1797, 1830, 2370
FokI GGATG 4 cut(s) 50, 140, 542, 566
FriOI GRGCYC 3 cut(s) 644, 916, 1358
Fsp4HI GCNGC 4 cut(s) 1000, 1797, 1830, 2370
FspBI CTAG 8 cut(s) 261, 438, 840, 897, 1062, 1142, 1694, 2196
FspI TGCGCA 1 cut(s) 983
GlaI GCGC 1 cut(s) 983
GluI GCNGC 4 cut(s) 1000, 1797, 1830, 2370
GsaI CCCAGC 2 cut(s) 676, 1836
GsuI CTGGAG 2 cut(s) 844, 1812
HaeIII GGCC 7 cut(s) 153, 642, 847, 1587, 1593, 2260, 2270
HapII CCGG 2 cut(s) 511, 910
HgaI GACGC 2 cut(s) 212, 774
HhaI GCGC 1 cut(s) 984
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 9 cut(s) 35, 220, 1574, 1711, 1767, 1892, 1949, 1999, 2339
Hin6I GCGC 1 cut(s) 982
HinP1I GCGC 1 cut(s) 982
HpaII CCGG 2 cut(s) 511, 910
HphI GGTGA 5 cut(s) 562, 1066, 1323, 1838, 2504
Hpy166II GTNNAC 4 cut(s) 139, 808, 1863, 2032
Hpy8I GTNNAC 4 cut(s) 139, 808, 1863, 2032
Hpy99I CGWCG 3 cut(s) 206, 755, 2447
HpyAV CCTTC 4 cut(s) 570, 654, 1040, 2412
HpyCH4III ACNGT 4 cut(s) 408, 1390, 1670, 2224
HpyCH4IV ACGT 2 cut(s) 750, 1503
HpyCH4V TGCA 9 cut(s) 776, 1127, 1257, 1322, 1451, 1829, 2136, 2239, 2297
HpyF10VI GCNNNNNNNGC 7 cut(s) 782, 791, 981, 1362, 1567, 1901, 2366
HpyF3I CTNAG 6 cut(s) 367, 585, 714, 1683, 1989, 2204
HpySE526I ACGT 2 cut(s) 750, 1503
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 9 cut(s) 35, 220, 1574, 1711, 1767, 1892, 1949, 1999, 2339
HspAI GCGC 1 cut(s) 982
KpnI GGTACC 1 cut(s) 735
Kzo9I GATC 8 cut(s) 274, 297, 700, 1117, 1580, 1922, 1984, 2083
LmnI GCTCC 3 cut(s) 1353, 1361, 1793
Lsp1109I GCAGC 4 cut(s) 1011, 1808, 1841, 2381
LweI GCATC 6 cut(s) 118, 785, 1099, 2236, 2347, 2485
MaeI CTAG 8 cut(s) 261, 438, 840, 897, 1062, 1142, 1694, 2196
MaeII ACGT 2 cut(s) 750, 1503
MaeIII GTNAC 5 cut(s) 923, 1245, 1329, 1664, 1976
MalI GATC 8 cut(s) 276, 299, 702, 1119, 1582, 1924, 1986, 2085
MboI GATC 8 cut(s) 274, 297, 700, 1117, 1580, 1922, 1984, 2083
MboII GAAGA 9 cut(s) 336, 541, 1118, 1213, 1435, 1799, 2042, 2082, 2255
MfeI CAATTG 2 cut(s) 115, 2352
MflI RGATCY 2 cut(s) 1117, 1922
MhlI GDGCHC 3 cut(s) 644, 916, 1358
MlsI TGGCCA 1 cut(s) 153
MluNI TGGCCA 1 cut(s) 153
MlyI GAGTC 6 cut(s) 36, 164, 1066, 1076, 1202, 1510
MmeI TCCRAC 3 cut(s) 145, 733, 2111
Mox20I TGGCCA 1 cut(s) 153
Mph1103I ATGCAT 2 cut(s) 1129, 2299
MroXI GAANNNNTTC 2 cut(s) 9, 416
MscI TGGCCA 1 cut(s) 153
MseI TTAA 5 cut(s) 957, 1080, 1658, 2190, 2325
MslI CAYNNNNRTG 6 cut(s) 215, 921, 1535, 1737, 1824, 1851
Msp20I TGGCCA 1 cut(s) 153
MspA1I CMGCKG 3 cut(s) 371, 1832, 2011
MspI CCGG 2 cut(s) 511, 910
MspR9I CCNGG 2 cut(s) 511, 911
MunI CAATTG 2 cut(s) 115, 2352
Mva1269I GAATGC 3 cut(s) 898, 1129, 2133
MwoI GCNNNNNNNGC 7 cut(s) 782, 791, 981, 1362, 1567, 1901, 2366
NciI CCSGG 2 cut(s) 511, 911
NdeI CATATG 1 cut(s) 41
NdeII GATC 8 cut(s) 274, 297, 700, 1117, 1580, 1922, 1984, 2083
NheI GCTAGC 1 cut(s) 839
NlaIII CATG 9 cut(s) 35, 220, 1574, 1711, 1767, 1892, 1949, 1999, 2339
NlaIV GGNNCC 6 cut(s) 184, 641, 642, 733, 1372, 1720
NmuCI GTSAC 3 cut(s) 923, 1245, 1329
NsbI TGCGCA 1 cut(s) 983
NsiI ATGCAT 2 cut(s) 1129, 2299
NspV TTCGAA 1 cut(s) 1745
OliI CACNNNNGTG 3 cut(s) 921, 1535, 1824
PagI TCATGA 1 cut(s) 2335
PctI GAATGC 3 cut(s) 898, 1129, 2133
PdmI GAANNNNTTC 2 cut(s) 9, 416
PfeI GAWTC 7 cut(s) 389, 1402, 1411, 1633, 1742, 1839, 2168
PkrI GCNGC 4 cut(s) 1001, 1798, 1831, 2371
PleI GAGTC 6 cut(s) 35, 164, 1065, 1075, 1201, 1510
PpsI GAGTC 6 cut(s) 35, 164, 1065, 1075, 1201, 1510
PpuMI RGGWCCY 1 cut(s) 1719
PshBI ATTAAT 1 cut(s) 2190
PsiI TTATAA 1 cut(s) 1557
Psp124BI GAGCTC 1 cut(s) 1358
Psp1406I AACGTT 1 cut(s) 1503
Psp5II RGGWCCY 1 cut(s) 1719
PspEI GGTNACC 2 cut(s) 1329, 1976
PspFI CCCAGC 2 cut(s) 672, 1832
PspN4I GGNNCC 6 cut(s) 184, 641, 642, 733, 1372, 1720
PspOMI GGGCCC 1 cut(s) 640
PspPI GGNCC 5 cut(s) 640, 641, 1371, 1719, 1928
PspPPI RGGWCCY 1 cut(s) 1719
PsuI RGATCY 2 cut(s) 1117, 1922
PvuII CAGCTG 3 cut(s) 371, 1832, 2011
RsaI GTAC 7 cut(s) 310, 321, 436, 481, 733, 1789, 1994
RsaNI GTAC 7 cut(s) 309, 320, 435, 480, 732, 1788, 1993
RseI CAYNNNNRTG 6 cut(s) 215, 921, 1535, 1737, 1824, 1851
SacI GAGCTC 1 cut(s) 1358
SaqAI TTAA 5 cut(s) 957, 1080, 1658, 2190, 2325
SatI GCNGC 4 cut(s) 1000, 1797, 1830, 2370
Sau3AI GATC 8 cut(s) 274, 297, 700, 1117, 1580, 1922, 1984, 2083
Sau96I GGNCC 5 cut(s) 640, 641, 1371, 1719, 1928
ScaI AGTACT 2 cut(s) 436, 481
SchI GAGTC 6 cut(s) 36, 164, 1066, 1076, 1202, 1510
ScrFI CCNGG 2 cut(s) 511, 911
SduI GDGCHC 3 cut(s) 644, 916, 1358
SfaNI GCATC 6 cut(s) 118, 785, 1099, 2236, 2347, 2485
SfcI CTRYAG 2 cut(s) 1113, 1360
SfuI TTCGAA 1 cut(s) 1745
SinI GGWCC 3 cut(s) 1371, 1719, 1928
SmiMI CAYNNNNRTG 6 cut(s) 215, 921, 1535, 1737, 1824, 1851
SmlI CTYRAG 3 cut(s) 352, 1723, 2054
SmoI CTYRAG 3 cut(s) 352, 1723, 2054
SpeI ACTAGT 2 cut(s) 437, 1693
SsiI CCGC 1 cut(s) 1642
SspI AATATT 1 cut(s) 1149
SspMI CTAG 8 cut(s) 261, 438, 840, 897, 1062, 1142, 1694, 2196
SstI GAGCTC 1 cut(s) 1358
StyD4I CCNGG 2 cut(s) 509, 909
StyI CCWWGG 1 cut(s) 1588
TaaI ACNGT 4 cut(s) 408, 1390, 1670, 2224
TaiI ACGT 2 cut(s) 753, 1506
TaqI TCGA 5 cut(s) 173, 1286, 1745, 1935, 2414
TaqII GACCGA 1 cut(s) 1388
TatI WGTACW 4 cut(s) 434, 479, 1787, 1992
TfiI GAWTC 7 cut(s) 389, 1402, 1411, 1633, 1742, 1839, 2168
Tru1I TTAA 5 cut(s) 957, 1080, 1658, 2190, 2325
Tru9I TTAA 5 cut(s) 957, 1080, 1658, 2190, 2325
TscAI CASTG 7 cut(s) 277, 427, 601, 841, 1393, 2208, 2221
TseFI GTSAC 3 cut(s) 923, 1245, 1329
TseI GCWGC 4 cut(s) 999, 1796, 1829, 2369
Tsp45I GTSAC 3 cut(s) 923, 1245, 1329
TspRI CASTG 7 cut(s) 277, 427, 601, 841, 1393, 2208, 2221
VpaK11BI GGWCC 3 cut(s) 1371, 1719, 1928
VspI ATTAAT 1 cut(s) 2190
XapI RAATTY 9 cut(s) 6, 157, 175, 545, 1440, 1601, 1782, 2110, 2469
XcmI CCANNNNNNNNNTGG 2 cut(s) 161, 1204
XmnI GAANNNNTTC 2 cut(s) 9, 416
XspI CTAG 8 cut(s) 261, 438, 840, 897, 1062, 1142, 1694, 2196
ZrmI AGTACT 2 cut(s) 436, 481
Zsp2I ATGCAT 2 cut(s) 1129, 2299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.