Rw2G014950

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000413
Physical Location & Seq
Reverse (-)
17152340 .. 17154793
2454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G014950.1

Sequence Viewer

Length: 2454 bp
ATGGAACATGCTCATATCCCATTGCTCTCTCTGCTTGTTTTTCTCCTCAACCTCTCATCCCTTCACTTTCTCTCTTTAGCCGATGATTATTACATCAACTGTGGCTCACATGATAATGCGAGCCTCAGTACTACTGGCCAGAATTTCTCCGGGGAATCCAAGTCTGGTTACTCTTTCTCCAAAAGCAAGGCTGTCAAAGACATCAACCAGTCGCTAGATATAGCACCTCTATATAAGACAGCAAGAGGTTTCAGTAAAGCATTCTACTACCAGTTCAACATCACTCAAAATGGTGCTTATCTGGTACGCCTACATTTCTTAGCTTTCTCCTCCTCCTCCTCCTCAAATAATCTCTCCACAGCTGTTTTCGGTGTCTTGGATTCTAAGAATTTCACACTGTTGAACAATTTCACTGCCAAGAACAGTACCAACTACCCTGTGATAAAGGAATTCTTCGTCCGAATTGATATTACCGACTCATTTAGACTATATTTTATTCCTCAACCATCATCTTTTGCATTTGTAAATGCCATTGAATTATTCCTCGCCCCTTCAGATTTCATTCCTGAGAACTATATCAGTAATCTCCCTTTACACACAATTTACCGACTGAACGTTGGAGGCTTACCATGGAATGACCCACAAGGGAGAAACTGGGAAACAGATGATAGTCATCTTTCTGATCCAAACTCTGCAAAGAATGCCAATCCTAAAAGTGAACTTAATCTAAATTACGTGCCAGAATCAGTTGATGGTCTATTCCTATCCAACTATACTTTTGCCCCAATTCAGGTTTACCAGACTGCTAAACATATGAGTAACAGTAGTAGCAGGCCAGCCATATCCTCCAACGTAACATGGTTTTTTAGTGTGAGTAGGAAAGCTAGACACATTGTCCGGGCTCACTTCTGTGACATTATTGGTCAGGCTGGTGAGATTATATTTAACTTGTATTCAAATGGCAACTTCCGCAAGGAGATCAGCAACATTTCTCAATATCCGGCTGTTCCTTTCTACTATGACTTTCTGGTGAATTCTAGTGAGTCTGAACTCATTAACATCACCATAAAACCTAAGAGTGAATCTGCCATACCAGATGCTTTTCTAAATGGTTTGGAAATATTGGAGATAGTGGAGGGATTAGCTCCAATTCCTACTGTGAGGGACTCCAAGAAGAATATTGTGGCTCCTGTGGTTGGTTCAGTTCTTGGAGGCCTGTCACTCATCTGCGTTTTAATAGTTGGATTTCTGTTCTGTTCCAGACACAGAAAGGCGAAAAAACGTGTGGAAACATCAGTTTGGTCACCAATGCCTGCAAATGGAGGAGGGAGTTCTCACGGCTCCGCTCTCAATCTTAATTACCTTGGGTTGAAGATAACTTTTAATGAAATTCAGTCTGCAACAAACAAGTTTGACACAAAGTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGGACTCTCTTGAACGGTACAAAAGTGGCTGTGAAGCGAGCTTATAAGCGAGATGAGCGTGGATCAGGTTCAGGCCAAGGTCTCCCAGAATTCGAAACAGAAATCATAGTGTTGTCGAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTACTGTAATGAAAGGTCTGAGATGATACTAGTGTATGAGTTCATGGAGAAAGGGACGTTGAGAGATCATTTGTATGATTCGGATGTGCCTCGCTTGTCATGGAAGCAAAGACTTGAAATTTGTACTGGTGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGGGAATCATTCACCGTGATGTCAAGTCCACCAACATATTGCTTAATGAAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAGATCTGGAGCTCTTGATGAAACGCATGTCAGCACTAATGTTAAAGGCACTCTTGGTTATCTTGATCCTGAGTACATGATGTCTGAACAGTTGACAGAAAAATCTGATGTTTACTCATTTGGTGTAGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCTATTGATCCAACACTTCCAAGAGAGCAAATGAACTTAGCTGAATGGGGAATGCTTTGCCAGAAAAGAGGGGTGCTTGAAGAGATTGTTGATTCTCCACTAAAGGGTCAGATTGATCCTAACTCACTGCGTAAGTTTGGTGAGACGGTTGAGAAGTGTTTGCAAGACGATGCTTGTGATAGGCCAACAATGGCGGATGTTCTGTGGGATTTGGAGTATGCATTACAGCTTCAGCAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACAAACATTGATGCTTCATCAGCAGCATTCTCTTTGCCAAATGTTCAGCGTTTTCCTTCACTTGGTTCGACGAGGAATGGAGATGATATCAGGGAAGCCGACTTGGACGCAACAGAAAGTGAAATTTTCTCTCAATTGAAAATTGGTGATGCCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

817

Amino Acids

90.7

Weight (kDa)

6.19

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 31 - 109 2.9e-06 Malectin domain
Malectin_like PF12819 32 - 376 5.4e-23 Malectin-like domain
Pkinase PF00069 474 - 743 2.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 475 - 744 5.5e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1506
AccBSI CCGCTC 1 cut(s) 1346
AciI CCGC 5 cut(s) 970, 1344, 1585, 1591, 2219
AclI AACGTT 1 cut(s) 615
AclWI GGATC 5 cut(s) 677, 1531, 1928, 2027, 2135
AcoI YGGCCR 1 cut(s) 136
AcsI RAATTY 8 cut(s) 142, 388, 449, 1033, 1389, 1550, 1731, 2418
AcuI CTGAAG 2 cut(s) 537, 2240
AfaI GTAC 6 cut(s) 130, 306, 427, 1480, 1738, 1943
AfiI CCNNNNNNNGG 5 cut(s) 790, 1196, 1319, 2129, 2357
AflIII ACRYGT 1 cut(s) 1282
AhdI GACNNNNNGTC 1 cut(s) 893
AhlI ACTAGT 1 cut(s) 1642
AleI CACNNNNGTG 2 cut(s) 909, 1773
Alw21I GWGCWC 1 cut(s) 1882
Alw26I GTCTC 3 cut(s) 1547, 1606, 2162
AlwI GGATC 5 cut(s) 677, 1531, 1928, 2027, 2135
AoxI GGCC 6 cut(s) 136, 833, 1213, 1534, 1861, 2207
ApeKI GCWGC 3 cut(s) 1745, 1778, 2318
ApoI RAATTY 8 cut(s) 142, 388, 449, 1033, 1389, 1550, 1731, 2418
ArsI GACNNNNNNTTYG 2 cut(s) 1716, 1748
Asp700I GAANNNNTTC 1 cut(s) 407
AsuC2I CCSGG 2 cut(s) 151, 899
AsuHPI GGTGA 8 cut(s) 944, 1042, 1054, 1296, 1438, 1787, 2177, 2453
AsuII TTCGAA 1 cut(s) 1554
BaeI ACNNNNGTAYC 4 cut(s) 1470, 1503, 1631, 1664
BalI TGGCCA 1 cut(s) 138
BanII GRGCYC 2 cut(s) 904, 1882
BbsI GAAGAC 1 cut(s) 1748
Bbv12I GWGCWC 1 cut(s) 1882
BbvI GCAGC 3 cut(s) 1757, 1790, 2330
BccI CCATC 3 cut(s) 514, 746, 1602
BceAI ACGGC 1 cut(s) 1354
BcnI CCSGG 2 cut(s) 151, 899
BcoDI GTCTC 3 cut(s) 1547, 1606, 2162
BcuI ACTAGT 1 cut(s) 1642
BfaI CTAG 4 cut(s) 215, 885, 1038, 1643
BglII AGATCT 1 cut(s) 1871
BisI GCNGC 3 cut(s) 1746, 1779, 2319
BlsI GCNGC 3 cut(s) 1747, 1780, 2320
BmcAI AGTACT 1 cut(s) 130
Bme1390I CCNGG 2 cut(s) 151, 899
BmeRI GACNNNNNGTC 1 cut(s) 893
BmiI GGNNCC 2 cut(s) 1188, 1342
BmrFI CCNGG 2 cut(s) 151, 899
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 4 cut(s) 1087, 2185, 2296, 2434
BmuI ACTGGG 1 cut(s) 664
BpiI GAAGAC 1 cut(s) 1748
BplI GAGNNNNNCTC 2 cut(s) 1452, 1484
BpmI CTGGAG 1 cut(s) 1896
Bpu14I TTCGAA 1 cut(s) 1554
BpuMI CCSGG 2 cut(s) 151, 899
BsaAI YACGTR 1 cut(s) 736
BsaBI GATNNNNATC 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 1547
BsaJI CCNNGG 4 cut(s) 150, 629, 1363, 1537
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 5 cut(s) 790, 1196, 1319, 2129, 2357
Bse1I ACTGG 5 cut(s) 139, 208, 271, 659, 1744
Bse3DI GCAATG 1 cut(s) 20
Bse8I GATNNNNATC 1 cut(s) 672
BseDI CCNNGG 4 cut(s) 150, 629, 1363, 1537
BseGI GGATG 3 cut(s) 56, 1702, 2227
BseJI GATNNNNATC 1 cut(s) 672
BseLI CCNNNNNNNGG 5 cut(s) 790, 1196, 1319, 2129, 2357
BseMI GCAATG 1 cut(s) 20
BseMII CTCAG 4 cut(s) 139, 558, 1623, 1929
BseNI ACTGG 5 cut(s) 139, 208, 271, 659, 1744
BseRI GAGGAG 7 cut(s) 35, 319, 322, 325, 328, 331, 1338
BseXI GCAGC 3 cut(s) 1757, 1790, 2330
BseYI CCCAGC 1 cut(s) 1781
BsgI GTGCAG 2 cut(s) 1764, 1797
BshFI GGCC 6 cut(s) 138, 835, 1215, 1536, 1863, 2209
BsiHKAI GWGCWC 1 cut(s) 1882
BsiSI CCGG 3 cut(s) 150, 898, 1001
BslFI GGGAC 3 cut(s) 1178, 1477, 1681
BslI CCNNNNNNNGG 5 cut(s) 790, 1196, 1319, 2129, 2357
BsmAI GTCTC 3 cut(s) 1547, 1606, 2162
BsmBI CGTCTC 1 cut(s) 2162
BsmFI GGGAC 3 cut(s) 1178, 1477, 1681
BsmI GAATGC 4 cut(s) 260, 706, 2082, 2321
BsnI GGCC 6 cut(s) 138, 835, 1215, 1536, 1863, 2209
Bso31I GGTCTC 1 cut(s) 1547
Bsp119I TTCGAA 1 cut(s) 1554
Bsp1286I GDGCHC 2 cut(s) 904, 1882
Bsp143I GATC 8 cut(s) 682, 978, 1523, 1678, 1871, 1933, 2032, 2140
Bsp19I CCATGG 1 cut(s) 629
BspACI CCGC 5 cut(s) 970, 1344, 1585, 1591, 2219
BspANI GGCC 6 cut(s) 138, 835, 1215, 1536, 1863, 2209
BspCNI CTCAG 4 cut(s) 138, 559, 1624, 1930
BspHI TCATGA 1 cut(s) 2284
BspLI GGNNCC 2 cut(s) 1188, 1342
BspPI GGATC 5 cut(s) 677, 1531, 1928, 2027, 2135
BspT104I TTCGAA 1 cut(s) 1554
BspTNI GGTCTC 1 cut(s) 1547
BsrBI CCGCTC 1 cut(s) 1346
BsrDI GCAATG 1 cut(s) 20
BsrI ACTGG 5 cut(s) 139, 208, 271, 659, 1744
BssECI CCNNGG 4 cut(s) 150, 629, 1363, 1537
BssMI GATC 8 cut(s) 682, 978, 1523, 1678, 1871, 1933, 2032, 2140
BssT1I CCWWGG 3 cut(s) 629, 1363, 1537
Bst6I CTCTTC 1 cut(s) 2100
BstAPI GCANNNNNTGC 1 cut(s) 701
BstBAI YACGTR 1 cut(s) 736
BstBI TTCGAA 1 cut(s) 1554
BstC8I GCNNGC 5 cut(s) 121, 833, 837, 1314, 1500
BstDEI CTNAG 8 cut(s) 125, 319, 384, 567, 1074, 1632, 1938, 2062
BstDSI CCRYGG 1 cut(s) 629
BstEII GGTNACC 1 cut(s) 1302
BstF5I GGATG 3 cut(s) 56, 1702, 2227
BstKTI GATC 8 cut(s) 685, 981, 1526, 1681, 1874, 1936, 2035, 2143
BstMAI GTCTC 3 cut(s) 1547, 1606, 2162
BstMBI GATC 8 cut(s) 682, 978, 1523, 1678, 1871, 1933, 2032, 2140
BstMWI GCNNNNNNNGC 7 cut(s) 31, 701, 969, 1516, 1850, 2024, 2315
BstNSI RCATGY 2 cut(s) 11, 1898
BstPI GGTNACC 1 cut(s) 1302
BstSCI CCNGG 2 cut(s) 149, 897
BstV1I GCAGC 3 cut(s) 1757, 1790, 2330
BstV2I GAAGAC 1 cut(s) 1748
BstX2I RGATCY 1 cut(s) 1871
BstYI RGATCY 1 cut(s) 1871
BsuRI GGCC 6 cut(s) 138, 835, 1215, 1536, 1863, 2209
BtgI CCRYGG 1 cut(s) 629
BtsCI GGATG 3 cut(s) 56, 1702, 2227
BtsI GCAGTG 2 cut(s) 411, 2150
BtsIMutI CAGTG 3 cut(s) 395, 411, 2150
Cac8I GCNNGC 5 cut(s) 121, 833, 837, 1314, 1500
CciI TCATGA 1 cut(s) 2284
CseI GACGC 1 cut(s) 2411
Csp6I GTAC 6 cut(s) 129, 305, 426, 1479, 1737, 1942
CviQI GTAC 6 cut(s) 129, 305, 426, 1479, 1737, 1942
DdeI CTNAG 8 cut(s) 125, 319, 384, 567, 1074, 1632, 1938, 2062
DpnI GATC 8 cut(s) 684, 980, 1525, 1680, 1873, 1935, 2034, 2142
DpnII GATC 8 cut(s) 682, 978, 1523, 1678, 1871, 1933, 2032, 2140
DriI GACNNNNNGTC 1 cut(s) 893
EaeI YGGCCR 1 cut(s) 136
Eam1104I CTCTTC 1 cut(s) 2100
Eam1105I GACNNNNNGTC 1 cut(s) 893
EarI CTCTTC 1 cut(s) 2100
EciI GGCGGA 2 cut(s) 1574, 2234
Ecl136II GAGCTC 1 cut(s) 1880
Eco130I CCWWGG 3 cut(s) 629, 1363, 1537
Eco147I AGGCCT 1 cut(s) 1215
Eco24I GRGCYC 2 cut(s) 904, 1882
Eco31I GGTCTC 1 cut(s) 1547
Eco32I GATATC 1 cut(s) 2383
Eco53kI GAGCTC 1 cut(s) 1880
Eco57I CTGAAG 2 cut(s) 537, 2240
Eco91I GGTNACC 1 cut(s) 1302
EcoICRI GAGCTC 1 cut(s) 1880
EcoO65I GGTNACC 1 cut(s) 1302
EcoRI GAATTC 3 cut(s) 449, 1033, 1550
EcoRV GATATC 1 cut(s) 2383
EcoT14I CCWWGG 3 cut(s) 629, 1363, 1537
EcoT22I ATGCAT 1 cut(s) 2248
EcoT38I GRGCYC 2 cut(s) 904, 1882
ErhI CCWWGG 3 cut(s) 629, 1363, 1537
Esp3I CGTCTC 1 cut(s) 2162
FalI AAGNNNNNCTT 6 cut(s) 437, 469, 1427, 1459, 1905, 1937
FaqI GGGAC 3 cut(s) 1178, 1477, 1681
FauNDI CATATG 1 cut(s) 813
Fnu4HI GCNGC 3 cut(s) 1746, 1779, 2319
FokI GGATG 3 cut(s) 43, 1709, 2234
FriOI GRGCYC 2 cut(s) 904, 1882
Fsp4HI GCNGC 3 cut(s) 1746, 1779, 2319
FspBI CTAG 4 cut(s) 215, 885, 1038, 1643
GluI GCNGC 3 cut(s) 1746, 1779, 2319
GsaI CCCAGC 1 cut(s) 1785
GsuI CTGGAG 1 cut(s) 1896
HaeIII GGCC 6 cut(s) 138, 835, 1215, 1536, 1863, 2209
HapII CCGG 3 cut(s) 150, 898, 1001
HgaI GACGC 1 cut(s) 2411
HincII GTYRAC 1 cut(s) 1962
HindII GTYRAC 1 cut(s) 1962
HindIII AAGCTT 1 cut(s) 2270
HpaII CCGG 3 cut(s) 150, 898, 1001
HphI GGTGA 8 cut(s) 944, 1042, 1054, 1296, 1438, 1787, 2177, 2453
Hpy166II GTNNAC 5 cut(s) 719, 796, 1812, 1962, 1981
Hpy188I TCNGA 9 cut(s) 461, 556, 682, 1048, 1633, 1696, 1954, 1975, 2136
Hpy188III TCNNGA 9 cut(s) 566, 1260, 1471, 1869, 1875, 1883, 1931, 1937, 2285
Hpy8I GTNNAC 5 cut(s) 719, 796, 1812, 1962, 1981
Hpy99I CGWCG 1 cut(s) 2368
HpyAV CCTTC 3 cut(s) 71, 561, 2361
HpyCH4IV ACGT 5 cut(s) 615, 735, 852, 1282, 1670
HpyCH4V TGCA 9 cut(s) 518, 695, 1316, 1400, 1745, 1778, 2018, 2188, 2246
HpyF10VI GCNNNNNNNGC 7 cut(s) 31, 701, 969, 1516, 1850, 2024, 2315
HpyF3I CTNAG 8 cut(s) 125, 319, 384, 567, 1074, 1632, 1938, 2062
HpySE526I ACGT 5 cut(s) 615, 735, 852, 1282, 1670
Kzo9I GATC 8 cut(s) 682, 978, 1523, 1678, 1871, 1933, 2032, 2140
LmnI GCTCC 4 cut(s) 1150, 1192, 1346, 1877
Lsp1109I GCAGC 3 cut(s) 1757, 1790, 2330
LweI GCATC 4 cut(s) 1087, 2185, 2296, 2434
MaeI CTAG 4 cut(s) 215, 885, 1038, 1643
MaeII ACGT 5 cut(s) 615, 735, 852, 1282, 1670
MaeIII GTNAC 7 cut(s) 167, 818, 853, 911, 1218, 1302, 1613
MalI GATC 8 cut(s) 684, 980, 1525, 1680, 1873, 1935, 2034, 2142
MbiI CCGCTC 1 cut(s) 1346
MboI GATC 8 cut(s) 682, 978, 1523, 1678, 1871, 1933, 2032, 2140
MboII GAAGA 5 cut(s) 445, 1186, 1384, 1748, 2117
MfeI CAATTG 1 cut(s) 2429
MflI RGATCY 1 cut(s) 1871
MhlI GDGCHC 2 cut(s) 904, 1882
MlsI TGGCCA 1 cut(s) 138
MluNI TGGCCA 1 cut(s) 138
MlyI GAGTC 4 cut(s) 470, 1052, 1160, 1459
MmeI TCCRAC 5 cut(s) 598, 792, 873, 1222, 2060
Mox20I TGGCCA 1 cut(s) 138
Mph1103I ATGCAT 1 cut(s) 2248
MroXI GAANNNNTTC 1 cut(s) 407
MscI TGGCCA 1 cut(s) 138
MslI CAYNNNNRTG 5 cut(s) 114, 909, 1686, 1773, 1800
Msp20I TGGCCA 1 cut(s) 138
MspA1I CMGCKG 2 cut(s) 362, 1781
MspI CCGG 3 cut(s) 150, 898, 1001
MspR9I CCNGG 2 cut(s) 151, 899
MunI CAATTG 1 cut(s) 2429
Mva1269I GAATGC 4 cut(s) 260, 706, 2082, 2321
MwoI GCNNNNNNNGC 7 cut(s) 31, 701, 969, 1516, 1850, 2024, 2315
NciI CCSGG 2 cut(s) 151, 899
NcoI CCATGG 1 cut(s) 629
NdeI CATATG 1 cut(s) 813
NdeII GATC 8 cut(s) 682, 978, 1523, 1678, 1871, 1933, 2032, 2140
NlaIV GGNNCC 2 cut(s) 1188, 1342
NmuCI GTSAC 3 cut(s) 911, 1218, 1302
NsiI ATGCAT 1 cut(s) 2248
NspI RCATGY 2 cut(s) 11, 1898
NspV TTCGAA 1 cut(s) 1554
OliI CACNNNNGTG 2 cut(s) 909, 1773
PagI TCATGA 1 cut(s) 2284
PceI AGGCCT 1 cut(s) 1215
PctI GAATGC 4 cut(s) 260, 706, 2082, 2321
PdmI GAANNNNTTC 1 cut(s) 407
PfeI GAWTC 7 cut(s) 155, 380, 743, 1082, 1691, 1788, 2117
PkrI GCNGC 3 cut(s) 1747, 1780, 2320
PleI GAGTC 4 cut(s) 470, 1051, 1160, 1459
PpsI GAGTC 4 cut(s) 470, 1051, 1160, 1459
Ppu21I YACGTR 1 cut(s) 736
PsiI TTATAA 1 cut(s) 1506
Psp124BI GAGCTC 1 cut(s) 1882
Psp1406I AACGTT 1 cut(s) 615
PspEI GGTNACC 1 cut(s) 1302
PspFI CCCAGC 1 cut(s) 1781
PspN4I GGNNCC 2 cut(s) 1188, 1342
PsuI RGATCY 1 cut(s) 1871
PvuII CAGCTG 2 cut(s) 362, 1781
RsaI GTAC 6 cut(s) 130, 306, 427, 1480, 1738, 1943
RsaNI GTAC 6 cut(s) 129, 305, 426, 1479, 1737, 1942
RseI CAYNNNNRTG 5 cut(s) 114, 909, 1686, 1773, 1800
SacI GAGCTC 1 cut(s) 1882
SatI GCNGC 3 cut(s) 1746, 1779, 2319
Sau3AI GATC 8 cut(s) 682, 978, 1523, 1678, 1871, 1933, 2032, 2140
ScaI AGTACT 1 cut(s) 130
SchI GAGTC 4 cut(s) 470, 1052, 1160, 1459
ScrFI CCNGG 2 cut(s) 151, 899
SduI GDGCHC 2 cut(s) 904, 1882
SfaNI GCATC 4 cut(s) 1087, 2185, 2296, 2434
SfuI TTCGAA 1 cut(s) 1554
SmiMI CAYNNNNRTG 5 cut(s) 114, 909, 1686, 1773, 1800
SpeI ACTAGT 1 cut(s) 1642
SseBI AGGCCT 1 cut(s) 1215
SsiI CCGC 5 cut(s) 970, 1344, 1585, 1591, 2219
SspI AATATT 2 cut(s) 1122, 1180
SspMI CTAG 4 cut(s) 215, 885, 1038, 1643
SstI GAGCTC 1 cut(s) 1882
StuI AGGCCT 1 cut(s) 1215
StyD4I CCNGG 2 cut(s) 149, 897
StyI CCWWGG 3 cut(s) 629, 1363, 1537
TaiI ACGT 5 cut(s) 618, 738, 855, 1285, 1673
TaqI TCGA 4 cut(s) 1554, 1577, 1868, 2363
TatI WGTACW 3 cut(s) 128, 1736, 1941
TfiI GAWTC 7 cut(s) 155, 380, 743, 1082, 1691, 1788, 2117
TscAI CASTG 3 cut(s) 402, 418, 2157
TseFI GTSAC 3 cut(s) 911, 1218, 1302
TseI GCWGC 3 cut(s) 1745, 1778, 2318
Tsp45I GTSAC 3 cut(s) 911, 1218, 1302
TspDTI ATGAA 9 cut(s) 550, 1401, 1638, 1645, 1748, 1845, 1902, 2072, 2301
TspRI CASTG 3 cut(s) 402, 418, 2157
XapI RAATTY 8 cut(s) 142, 388, 449, 1033, 1389, 1550, 1731, 2418
XceI RCATGY 2 cut(s) 11, 1898
XmnI GAANNNNTTC 1 cut(s) 407
XspI CTAG 4 cut(s) 215, 885, 1038, 1643
ZrmI AGTACT 1 cut(s) 130
Zsp2I ATGCAT 1 cut(s) 2248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.