Rmu_sc0000751.1_g000019

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000751.1
OG0000413
Physical Location & Seq
Reverse (-)
42392 .. 42958
567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000751.1_g000019.1.cds

Sequence Viewer

Length: 567 bp
atgttcagtgaaccattctactaccaattcaacatcgatcaaaatggtacttatctgctacgcctacatttcttggccttttcttccacctcaagtgatctctccatagctgtttttgatgttttggattctacgaatttcacactattgagcaatttcactgccaagaatagtactagttctccttttataaaggagttctttatcagaaatgatagtactggctcatttaggctgtattttagaccccggacatcatctttggcatttataaatgccattgaattcttcgccatcccttcaaatttcaccaacttcatccctgaggattacactggtaatttccctttacagacaatttacagggtgaatgttgggggcccttcacaaaatgatacattgtggagaagctgggaaacagatgacacttacctgcctgacccaaactctgctaaggatagcaacaaaggtacccttggtagtagaatttacaatggaaaaattgatggtttggttatatctaatgagtctgttacccggattgggtttaccagactgctaaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

188

Amino Acids

21.39

Weight (kDa)

5.37

Isoelectric Point (pI)

32.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 191, 272
Acc36I ACCTGC 1 cut(s) 441
Acc65I GGTACC 1 cut(s) 470
AccB1I GGYRCC 1 cut(s) 470
AcsI RAATTY 4 cut(s) 136, 284, 304, 486
AfaI GTAC 4 cut(s) 49, 175, 220, 472
AfiI CCNNNNNNNGG 1 cut(s) 543
AgsI TTSAA 3 cut(s) 31, 284, 303
AhlI ACTAGT 1 cut(s) 176
AluBI AGCT 2 cut(s) 110, 411
AluI AGCT 2 cut(s) 110, 411
AoxI GGCC 2 cut(s) 75, 379
ApaI GGGCCC 1 cut(s) 383
ApoI RAATTY 4 cut(s) 136, 284, 304, 486
ArsI GACNNNNNNTTYG 2 cut(s) 244, 276
Asp718I GGTACC 1 cut(s) 470
AspS9I GGNCC 2 cut(s) 379, 380
AsuC2I CCSGG 2 cut(s) 250, 538
AsuHPI GGTGA 2 cut(s) 301, 379
AxyI CCTNAGG 1 cut(s) 324
BaeGI GKGCMC 1 cut(s) 383
BaeI ACNNNNGTAYC 2 cut(s) 454, 487
BanI GGYRCC 1 cut(s) 470
BanII GRGCYC 1 cut(s) 383
BccI CCATC 2 cut(s) 302, 500
BcnI CCSGG 2 cut(s) 250, 538
BcuI ACTAGT 1 cut(s) 176
BfaI CTAG 1 cut(s) 177
BfuAI ACCTGC 1 cut(s) 441
BmcAI AGTACT 2 cut(s) 175, 220
Bme1390I CCNGG 2 cut(s) 250, 538
BmgT120I GGNCC 2 cut(s) 379, 380
BmiI GGNNCC 3 cut(s) 380, 381, 472
BmrFI CCNGG 2 cut(s) 250, 538
Bpu10I CCTNAGC 1 cut(s) 453
BpuEI CTTGAG 1 cut(s) 76
BpuMI CCSGG 2 cut(s) 250, 538
Bsa29I ATCGAT 1 cut(s) 36
BsaJI CCNNGG 2 cut(s) 248, 475
BsaXI ACNNNNNCTCC 2 cut(s) 166, 196
Bsc4I CCNNNNNNNGG 1 cut(s) 543
Bse1I ACTGG 2 cut(s) 226, 340
Bse21I CCTNAGG 1 cut(s) 324
BseCI ATCGAT 1 cut(s) 36
BseDI CCNNGG 2 cut(s) 248, 475
BseGI GGATG 2 cut(s) 294, 318
BseLI CCNNNNNNNGG 1 cut(s) 543
BseMII CTCAG 1 cut(s) 315
BseNI ACTGG 2 cut(s) 226, 340
BseSI GKGCMC 1 cut(s) 383
BseYI CCCAGC 1 cut(s) 411
BshFI GGCC 2 cut(s) 77, 381
BshNI GGYRCC 1 cut(s) 470
BshVI ATCGAT 1 cut(s) 36
BsiSI CCGG 2 cut(s) 250, 538
BslI CCNNNNNNNGG 1 cut(s) 543
BsnI GGCC 2 cut(s) 77, 381
Bsp120I GGGCCC 1 cut(s) 379
Bsp1286I GDGCHC 1 cut(s) 383
Bsp143I GATC 2 cut(s) 37, 97
BspANI GGCC 2 cut(s) 77, 381
BspCNI CTCAG 1 cut(s) 316
BspDI ATCGAT 1 cut(s) 36
BspLI GGNNCC 3 cut(s) 380, 381, 472
BspMI ACCTGC 1 cut(s) 441
BspT107I GGYRCC 1 cut(s) 470
BsrI ACTGG 2 cut(s) 226, 340
BssECI CCNNGG 2 cut(s) 248, 475
BssMI GATC 2 cut(s) 37, 97
BssT1I CCWWGG 1 cut(s) 475
BstDEI CTNAG 2 cut(s) 324, 453
BstF5I GGATG 2 cut(s) 294, 318
BstKTI GATC 2 cut(s) 40, 100
BstMBI GATC 2 cut(s) 37, 97
BstSCI CCNGG 2 cut(s) 248, 536
BstSLI GKGCMC 1 cut(s) 383
Bsu15I ATCGAT 1 cut(s) 36
Bsu36I CCTNAGG 1 cut(s) 324
BsuRI GGCC 2 cut(s) 77, 381
BsuTUI ATCGAT 1 cut(s) 36
BtsCI GGATG 2 cut(s) 294, 318
BtsI GCAGTG 1 cut(s) 159
BtsIMutI CAGTG 3 cut(s) 13, 159, 333
BveI ACCTGC 1 cut(s) 441
Cfr13I GGNCC 2 cut(s) 379, 380
ClaI ATCGAT 1 cut(s) 36
Csp6I GTAC 4 cut(s) 48, 174, 219, 471
CviJI RGCY 6 cut(s) 77, 110, 225, 235, 381, 411
CviKI_1 RGCY 6 cut(s) 77, 110, 225, 235, 381, 411
CviQI GTAC 4 cut(s) 48, 174, 219, 471
DdeI CTNAG 2 cut(s) 324, 453
DpnI GATC 2 cut(s) 39, 99
DpnII GATC 2 cut(s) 37, 97
Eco130I CCWWGG 1 cut(s) 475
Eco24I GRGCYC 1 cut(s) 383
Eco81I CCTNAGG 1 cut(s) 324
EcoO109I RGGNCCY 2 cut(s) 379, 380
EcoRI GAATTC 1 cut(s) 284
EcoT14I CCWWGG 1 cut(s) 475
EcoT38I GRGCYC 1 cut(s) 383
ErhI CCWWGG 1 cut(s) 475
FaiI YATR 4 cut(s) 107, 191, 272, 518
FalI AAGNNNNNCTT 4 cut(s) 185, 217, 459, 491
FokI GGATG 2 cut(s) 281, 305
FriOI GRGCYC 1 cut(s) 383
FspBI CTAG 1 cut(s) 177
GsaI CCCAGC 1 cut(s) 415
HaeIII GGCC 2 cut(s) 77, 381
HapII CCGG 2 cut(s) 250, 538
HinfI GANTC 2 cut(s) 128, 527
HpaII CCGG 2 cut(s) 250, 538
HphI GGTGA 2 cut(s) 301, 379
Hpy166II GTNNAC 2 cut(s) 11, 549
Hpy188I TCNGA 1 cut(s) 209
Hpy8I GTNNAC 2 cut(s) 11, 549
HpyAV CCTTC 2 cut(s) 309, 393
HpyF3I CTNAG 2 cut(s) 324, 453
KpnI GGTACC 1 cut(s) 474
Kzo9I GATC 2 cut(s) 37, 97
LpnPI CCDG 9 cut(s) 207, 263, 321, 336, 349, 397, 446, 450, 551
MaeI CTAG 1 cut(s) 177
MaeIII GTNAC 1 cut(s) 532
MalI GATC 2 cut(s) 39, 99
MboI GATC 2 cut(s) 37, 97
MboII GAAGA 2 cut(s) 75, 280
MhlI GDGCHC 1 cut(s) 383
MluCI AATT 9 cut(s) 26, 136, 154, 284, 304, 340, 357, 486, 501
MlyI GAGTC 1 cut(s) 536
MnlI CCTC 2 cut(s) 100, 319
MspI CCGG 2 cut(s) 250, 538
MspR9I CCNGG 2 cut(s) 250, 538
NciI CCSGG 2 cut(s) 250, 538
NdeII GATC 2 cut(s) 37, 97
NlaIV GGNNCC 3 cut(s) 380, 381, 472
PfeI GAWTC 1 cut(s) 128
PleI GAGTC 1 cut(s) 535
PpsI GAGTC 1 cut(s) 535
PsiI TTATAA 2 cut(s) 191, 272
PspFI CCCAGC 1 cut(s) 411
PspN4I GGNNCC 3 cut(s) 380, 381, 472
PspOMI GGGCCC 1 cut(s) 379
PspPI GGNCC 2 cut(s) 379, 380
RsaI GTAC 4 cut(s) 49, 175, 220, 472
RsaNI GTAC 4 cut(s) 48, 174, 219, 471
Sau3AI GATC 2 cut(s) 37, 97
Sau96I GGNCC 2 cut(s) 379, 380
ScaI AGTACT 2 cut(s) 175, 220
SchI GAGTC 1 cut(s) 536
ScrFI CCNGG 2 cut(s) 250, 538
SduI GDGCHC 1 cut(s) 383
SetI ASST 5 cut(s) 92, 112, 413, 435, 472
SmlI CTYRAG 1 cut(s) 91
SmoI CTYRAG 1 cut(s) 91
SpeI ACTAGT 1 cut(s) 176
Sse9I AATT 9 cut(s) 26, 136, 154, 284, 304, 340, 357, 486, 501
SspMI CTAG 1 cut(s) 177
StyD4I CCNGG 2 cut(s) 248, 536
StyI CCWWGG 1 cut(s) 475
TaqI TCGA 1 cut(s) 36
TasI AATT 9 cut(s) 26, 136, 154, 284, 304, 340, 357, 486, 501
TatI WGTACW 2 cut(s) 173, 218
TfiI GAWTC 1 cut(s) 128
TscAI CASTG 3 cut(s) 13, 166, 340
TspDTI ATGAA 1 cut(s) 307
TspRI CASTG 3 cut(s) 13, 166, 340
XapI RAATTY 4 cut(s) 136, 284, 304, 486
XspI CTAG 1 cut(s) 177
ZrmI AGTACT 2 cut(s) 175, 220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.