MD15G1289500.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000413
Physical Location & Seq
Reverse (-)
26761363 .. 26763909
2547 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1289500.v1.1.491

Sequence Viewer

Length: 2547 bp
ATGGTCACTCAGACAGAACTCCATAGCCTAAACACTTGCAGAATTCAGCAACTCCATCAAATTTTCATGGAAAATCTTCGTATCCGCAAAACCCCTCTCCCTCTATTTTCTGTGCTTGTTTTTCTCCTCCATTTCTCATCCCTTCACTTTCCTTCGTTGGCTTATGAGCCCCCTGATGACTACTTCATCAACTGCGGGTCAAATGCTAATGCCACCCTCAATAACCATGTCTTCACTGCAGATCGTTTCTTCCACTCGAAGGCGAGCAGCCCTATCAATGGCGGCGACCAGTCCAATCTTTACCTTACAGCAAGAATTTTCAGGCAAGAATCCTACTATAAGTTCGACATCACTGAAAACGGTACTTATTTTGTACGTCTGCATTTCTTGGCTTTCGGCTCTTCCTCAAGTAATCTCTCCGCTGCTCTTTTTGATGTTTCGGCTTTTCCTAATATTTTGAATTCTGGATTCATGCTGTTGAAGAATTTCACTGCTAAGAATAGTAGTGGCAATTCTACGATAAAGGAGTTCTTTCTTGGCATTGATCCTGGCTCATTTAGGATATACTTTACGCCTCGTGGATCGTCTTTTGCATTTGTAAATGCCATTGAAGTCTTCCTTGCCCCTGCAAATTTCAGCCCTAAGAATTACACAAGTAGTTCCCCTTTAGTTCTACATACAATTTACAGGGTGAATGTTGGAGGTCAAGAAGTCCGACCAGATAAGGACAAACTATGGCGAAACTGGGATCCTGATGATCTTTATCTGAAGAATTCAAACTCTGCACAGGAAGCCGTATCCTCACAGATGCCTGACTACAAGGAGTATGAACTTGATGGTTTTGTTGCTGCTGCTAATGATTCTATTGCCCCAGTTTCAGTTTACGACACTGCCAAAGTAATGGACAATAGTAGTAGCAGCCCGTCCACTTTGTTCAACATAACCTGGTCGTTTAATGTGCGCAGGAACGCTAAACATCTCGTCCGGGCACATTTTTGCGACCTTGTTGGCCAAACTGCCGACATTGTTTTTAACTTGTATTCAAATGGAAACTTCACTAAGAGGGTGGGTGGACCCGAATCCATGTTTGGCAACCTGTTGCCTTACTACTACGATTTTGTGGTGGAGTCTAAGGAGTCTGAACTCATTAACATCAGCATAGGTCCTAACACAGAAGAAACTACCACTAAAAATTCCTTTCTAAATGGACTGGAAATGTTGGAAATAATGGAGGAATCAGCACCAATTCCAAATATGAAAGAGCCCAAGAGCATAAACGTCATTGTTGTGGTTGGTTCGGTTCTTGGAGGTCTGTGTCTTATCTGCATTTTGGTTGTCGGGTTCTTGTTCGGTTTGAAATACAGAAAGGCAAAGCATGTTGAAACTTCGGAATGGTCACCAATGCCTGCATTTGGAGGAGGGAGTACCCACAGCAGGTTCACTGAGGGAACGATTACTGGCTCCCCTATGACTTATCTAAATCTTGGGTTGAAGATATCTTTTGCTCAACTTCAGCAAGCAACGAACAACTTTGACACAAAATTTCTGATAGGCGAGGGTGGCTTTGGGAACGTCTATAGAGGAACTCTATCAGATGGCAGAATTGTAGCTGTCAAGCGAGGTAAACGACATGAACATAGTTCAGGTCAAGGGCTTCCAGAGTTTGAAACAGAGATTATGGTTTTGTCCAGGATTCGTCATCGCCATCTTGTCGCCTTAATTGGGTACTGTGATGAAAGGTCTGAGATGATATTGGTCTACGAGTTCATGGAGAAAGGGACCTTGAGAGAACATTTATATGAATCAAATTTGCCTCGCTTGACATGGAAGCAAAGACTTGAAATATGCATTGGTGCAGCAAGGGGTCTTCATTACCTCCACAAAGGTGCAGCCGGAGGCATCATTCACCGCGATGTTAAGTCCACCAACATCTTGTTGGATGCAAAATGTGTCGCCAAAGTTGCTGATTTTGGCCTTTCAAGATCTGGTCCGCTTGATGAAACCCATGTCAGTACAAATGTCAAAGGCACCTTTGGTTACCTAGATCCTGAGTACATAATGACTCAACAGTTGACAGAAAAATCGGATGTTTACTCCTTCGGCGTTGTTCTCCTTGAGGTGTTATGTGCAAGACCTGCTCTGGATAGGAATCTACCAAGAGAACAAATAAATTTAGCGGAATGGGGAATGAATTGCAAGAAGAACGGATTGCTTGAACAGATTGTTGATTCTTCACTCAAGGGTCAGATTGATCCTAGCTCGCTAAGAAAATTTAGCGAGACAACAGAGAAATGCTTGCAAGAAGATGCTTATGATAGGCCTACAATGGGTGATGTACTGTGGGACTTGGAGTACGCGTTACAGCTCCAGCAAACAGCAAAGCATAGAGAACCCCACGAGGACAGCACGATCAATGCTTCATCAGAATTCATATTGCCTAATGTTCAGCATTTTCCTTCCCATAGCTCTACGGTTAACCCAGATGATATGACCTTTTCCGGGGTGGATGAATCGGACAAGGCAGCAATGAAGTATTCTCACAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

849

Amino Acids

94.95

Weight (kDa)

6.02

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 61 - 134 3.3e-07 Malectin domain
Malectin_like PF12819 63 - 407 3.5e-26 Malectin-like domain
Pkinase PF00069 514 - 780 1.8e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 516 - 780 4.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 962
Acc36I ACCTGC 2 cut(s) 1425, 2143
AccB1I GGYRCC 1 cut(s) 2027
AccI GTMKAC 1 cut(s) 1758
AccII CGCG 2 cut(s) 1911, 2357
AciI CCGC 7 cut(s) 85, 195, 282, 420, 1909, 1991, 2177
AclWI GGATC 6 cut(s) 539, 589, 743, 756, 2039, 2246
AcoI YGGCCR 1 cut(s) 1009
AcuI CTGAAG 2 cut(s) 788, 1496
AfaI GTAC 8 cut(s) 364, 375, 1426, 1727, 2014, 2054, 2337, 2354
AfiI CCNNNNNNNGG 7 cut(s) 259, 278, 1412, 1434, 1722, 2327, 2499
AflIII ACRYGT 1 cut(s) 2355
AjnI CCWGG 3 cut(s) 547, 944, 1688
AjuI GAANNNNNNNTTGG 4 cut(s) 1071, 1103, 1833, 1865
AleI CACNNNNGTG 1 cut(s) 1884
AluBI AGCT 4 cut(s) 1610, 2259, 2365, 2466
AluI AGCT 4 cut(s) 1610, 2259, 2365, 2466
Alw26I GTCTC 1 cut(s) 2273
AlwI GGATC 6 cut(s) 539, 589, 743, 756, 2039, 2246
AoxI GGCC 3 cut(s) 1009, 1972, 2318
ApeKI GCWGC 8 cut(s) 267, 422, 848, 851, 918, 1856, 1889, 2522
Asp700I GAANNNNTTC 2 cut(s) 75, 485
AspLEI GCGC 1 cut(s) 963
AspS9I GGNCC 4 cut(s) 1073, 1163, 1779, 1988
AsuC2I CCSGG 2 cut(s) 986, 2500
AsuHPI GGTGA 4 cut(s) 703, 1389, 1898, 2342
AvaII GGWCC 4 cut(s) 1073, 1163, 1779, 1988
BaeGI GKGCMC 1 cut(s) 991
BalI TGGCCA 1 cut(s) 1011
BamHI GGATCC 1 cut(s) 748
BanI GGYRCC 1 cut(s) 2027
BanII GRGCYC 2 cut(s) 171, 1266
BauI CACGAG 2 cut(s) 576, 2396
BbsI GAAGAC 3 cut(s) 223, 607, 1859
BbvI GCAGC 8 cut(s) 279, 409, 835, 838, 930, 1868, 1901, 2534
BccI CCATC 4 cut(s) 63, 830, 1589, 1713
BceAI ACGGC 1 cut(s) 779
BciT130I CCWGG 3 cut(s) 549, 946, 1690
BciVI GTATCC 2 cut(s) 92, 808
BcnI CCSGG 2 cut(s) 986, 2500
BcoDI GTCTC 1 cut(s) 2273
BfaI CTAG 2 cut(s) 2042, 2256
BfmI CTRYAG 2 cut(s) 237, 1576
BfuAI ACCTGC 2 cut(s) 1425, 2143
BfuI GTATCC 2 cut(s) 92, 808
BglII AGATCT 1 cut(s) 1982
BisI GCNGC 9 cut(s) 268, 283, 423, 849, 852, 919, 1857, 1890, 2523
BlsI GCNGC 9 cut(s) 269, 284, 424, 850, 853, 920, 1858, 1891, 2524
Bme1390I CCNGG 5 cut(s) 549, 946, 986, 1690, 2500
Bme18I GGWCC 4 cut(s) 1073, 1163, 1779, 1988
BmgT120I GGNCC 4 cut(s) 1073, 1163, 1779, 1988
BmiI GGNNCC 5 cut(s) 750, 1075, 1462, 1780, 2029
BmrFI CCNGG 5 cut(s) 549, 946, 986, 1690, 2500
BmrI ACTGGG 2 cut(s) 754, 866
BmsI GCATC 4 cut(s) 798, 1908, 1930, 2296
BmuI ACTGGG 2 cut(s) 754, 866
BpiI GAAGAC 3 cut(s) 223, 607, 1859
BpmI CTGGAG 1 cut(s) 2351
BpuEI CTTGAG 4 cut(s) 391, 1804, 2135, 2222
BpuMI CCSGG 2 cut(s) 986, 2500
BsaBI GATNNNNATC 2 cut(s) 762, 2148
BsaJI CCNNGG 1 cut(s) 2499
BsaXI ACNNNNNCTCC 2 cut(s) 2342, 2372
Bsc4I CCNNNNNNNGG 7 cut(s) 259, 278, 1412, 1434, 1722, 2327, 2499
Bse1I ACTGG 5 cut(s) 289, 749, 872, 1215, 1462
Bse3DI GCAATG 1 cut(s) 2532
Bse8I GATNNNNATC 2 cut(s) 762, 2148
BseBI CCWGG 3 cut(s) 549, 946, 1690
BseDI CCNNGG 1 cut(s) 2499
BseGI GGATG 4 cut(s) 137, 1945, 2092, 2512
BseJI GATNNNNATC 2 cut(s) 762, 2148
BseLI CCNNNNNNNGG 7 cut(s) 259, 278, 1412, 1434, 1722, 2327, 2499
BseMI GCAATG 1 cut(s) 2532
BseMII CTCAG 4 cut(s) 23, 1434, 1734, 2040
BseNI ACTGG 5 cut(s) 289, 749, 872, 1215, 1462
BseRI GAGGAG 2 cut(s) 116, 1431
BseSI GKGCMC 1 cut(s) 991
BseXI GCAGC 8 cut(s) 279, 409, 835, 838, 930, 1868, 1901, 2534
BsgI GTGCAG 3 cut(s) 768, 1875, 1908
Bsh1236I CGCG 2 cut(s) 1911, 2357
BshFI GGCC 3 cut(s) 1011, 1974, 2320
BshNI GGYRCC 1 cut(s) 2027
BsiSI CCGG 3 cut(s) 985, 1893, 2499
BslFI GGGAC 2 cut(s) 1792, 2357
BslI CCNNNNNNNGG 7 cut(s) 259, 278, 1412, 1434, 1722, 2327, 2499
BsmAI GTCTC 1 cut(s) 2273
BsmFI GGGAC 2 cut(s) 1792, 2357
BsnI GGCC 3 cut(s) 1011, 1974, 2320
Bsp1286I GDGCHC 3 cut(s) 171, 991, 1266
Bsp143I GATC 9 cut(s) 241, 544, 581, 748, 757, 1982, 2044, 2251, 2409
BspACI CCGC 7 cut(s) 85, 195, 282, 420, 1909, 1991, 2177
BspANI GGCC 3 cut(s) 1011, 1974, 2320
BspCNI CTCAG 4 cut(s) 22, 1435, 1735, 2041
BspFNI CGCG 2 cut(s) 1911, 2357
BspLI GGNNCC 5 cut(s) 750, 1075, 1462, 1780, 2029
BspMAI CTGCAG 1 cut(s) 241
BspMI ACCTGC 2 cut(s) 1425, 2143
BspPI GGATC 6 cut(s) 539, 589, 743, 756, 2039, 2246
BspQI GCTCTTC 1 cut(s) 406
BspT107I GGYRCC 1 cut(s) 2027
BsrDI GCAATG 1 cut(s) 2532
BsrI ACTGG 5 cut(s) 289, 749, 872, 1215, 1462
BssECI CCNNGG 1 cut(s) 2499
BssMI GATC 9 cut(s) 241, 544, 581, 748, 757, 1982, 2044, 2251, 2409
BssSI CACGAG 2 cut(s) 576, 2396
Bst2BI CACGAG 2 cut(s) 576, 2396
Bst2UI CCWGG 3 cut(s) 549, 946, 1690
Bst4CI ACNGT 5 cut(s) 362, 1730, 2070, 2340, 2473
Bst6I CTCTTC 1 cut(s) 406
BstAPI GCANNNNNTGC 1 cut(s) 2135
BstC8I GCNNGC 5 cut(s) 265, 1407, 1518, 2261, 2297
BstDEI CTNAG 9 cut(s) 9, 495, 642, 1059, 1131, 1443, 1743, 2049, 2264
BstEII GGTNACC 2 cut(s) 1395, 2036
BstF5I GGATG 4 cut(s) 137, 1945, 2092, 2512
BstFNI CGCG 2 cut(s) 1911, 2357
BstHHI GCGC 1 cut(s) 963
BstKTI GATC 9 cut(s) 244, 547, 584, 751, 760, 1985, 2047, 2254, 2412
BstMAI GTCTC 1 cut(s) 2273
BstMBI GATC 9 cut(s) 241, 544, 581, 748, 757, 1982, 2044, 2251, 2409
BstMWI GCNNNNNNNGC 4 cut(s) 791, 1560, 1961, 2135
BstNI CCWGG 3 cut(s) 549, 946, 1690
BstNSI RCATGY 1 cut(s) 1379
BstPI GGTNACC 2 cut(s) 1395, 2036
BstSCI CCNGG 5 cut(s) 547, 944, 984, 1688, 2498
BstSFI CTRYAG 2 cut(s) 237, 1576
BstSLI GKGCMC 1 cut(s) 991
BstUI CGCG 2 cut(s) 1911, 2357
BstV1I GCAGC 8 cut(s) 279, 409, 835, 838, 930, 1868, 1901, 2534
BstV2I GAAGAC 3 cut(s) 223, 607, 1859
BstX2I RGATCY 3 cut(s) 748, 1982, 2044
BstXI CCANNNNNNTGG 1 cut(s) 901
BstYI RGATCY 3 cut(s) 748, 1982, 2044
BsuI GTATCC 2 cut(s) 92, 808
BsuRI GGCC 3 cut(s) 1011, 1974, 2320
BtgZI GCGATG 2 cut(s) 1685, 1926
BtsCI GGATG 4 cut(s) 137, 1945, 2092, 2512
BtsI GCAGTG 3 cut(s) 234, 489, 888
BtsIMutI CAGTG 5 cut(s) 234, 351, 489, 888, 1440
BveI ACCTGC 2 cut(s) 1425, 2143
Cac8I GCNNGC 5 cut(s) 265, 1407, 1518, 2261, 2297
CfoI GCGC 1 cut(s) 963
Cfr13I GGNCC 4 cut(s) 1073, 1163, 1779, 1988
CsiI ACCWGGT 1 cut(s) 944
Csp6I GTAC 8 cut(s) 363, 374, 1425, 1726, 2013, 2053, 2336, 2353
CviAII CATG 9 cut(s) 67, 227, 472, 1084, 1376, 1631, 1768, 1824, 2006
CviQI GTAC 8 cut(s) 363, 374, 1425, 1726, 2013, 2053, 2336, 2353
DdeI CTNAG 9 cut(s) 9, 495, 642, 1059, 1131, 1443, 1743, 2049, 2264
DpnI GATC 9 cut(s) 243, 546, 583, 750, 759, 1984, 2046, 2253, 2411
DpnII GATC 9 cut(s) 241, 544, 581, 748, 757, 1982, 2044, 2251, 2409
EaeI YGGCCR 1 cut(s) 1009
Eam1104I CTCTTC 1 cut(s) 406
EarI CTCTTC 1 cut(s) 406
Eco147I AGGCCT 1 cut(s) 2320
Eco24I GRGCYC 2 cut(s) 171, 1266
Eco32I GATATC 1 cut(s) 1497
Eco47I GGWCC 4 cut(s) 1073, 1163, 1779, 1988
Eco57I CTGAAG 2 cut(s) 788, 1496
Eco91I GGTNACC 2 cut(s) 1395, 2036
EcoO109I RGGNCCY 2 cut(s) 1163, 1779
EcoO65I GGTNACC 2 cut(s) 1395, 2036
EcoRI GAATTC 4 cut(s) 42, 460, 772, 2426
EcoRII CCWGG 3 cut(s) 547, 944, 1688
EcoRV GATATC 1 cut(s) 1497
EcoT22I ATGCAT 1 cut(s) 1850
EcoT38I GRGCYC 2 cut(s) 171, 1266
FaeI CATG 9 cut(s) 70, 230, 475, 1087, 1379, 1634, 1771, 1827, 2009
FalI AAGNNNNNCTT 4 cut(s) 515, 547, 603, 635
FaqI GGGAC 2 cut(s) 1792, 2357
FatI CATG 9 cut(s) 66, 226, 471, 1083, 1375, 1630, 1767, 1823, 2005
FauI CCCGC 1 cut(s) 188
FblI GTMKAC 1 cut(s) 1758
Fnu4HI GCNGC 9 cut(s) 268, 283, 423, 849, 852, 919, 1857, 1890, 2523
FokI GGATG 4 cut(s) 124, 1952, 2099, 2519
FriOI GRGCYC 2 cut(s) 171, 1266
Fsp4HI GCNGC 9 cut(s) 268, 283, 423, 849, 852, 919, 1857, 1890, 2523
FspBI CTAG 2 cut(s) 2042, 2256
FspI TGCGCA 1 cut(s) 962
GlaI GCGC 1 cut(s) 962
GluI GCNGC 9 cut(s) 268, 283, 423, 849, 852, 919, 1857, 1890, 2523
GsuI CTGGAG 1 cut(s) 2351
HaeIII GGCC 3 cut(s) 1011, 1974, 2320
HapII CCGG 3 cut(s) 985, 1893, 2499
HhaI GCGC 1 cut(s) 963
Hin1II CATG 9 cut(s) 70, 230, 475, 1087, 1379, 1634, 1771, 1827, 2009
Hin6I GCGC 1 cut(s) 961
HinP1I GCGC 1 cut(s) 961
HincII GTYRAC 2 cut(s) 2073, 2476
HindII GTYRAC 2 cut(s) 2073, 2476
HpaI GTTAAC 1 cut(s) 2476
HpaII CCGG 3 cut(s) 985, 1893, 2499
HphI GGTGA 4 cut(s) 703, 1389, 1898, 2342
Hpy188III TCNNGA 7 cut(s) 465, 707, 752, 1658, 1980, 2048, 2141
HpyAV CCTTC 5 cut(s) 152, 162, 253, 2107, 2466
HpyCH4III ACNGT 5 cut(s) 362, 1730, 2070, 2340, 2473
HpyCH4IV ACGT 3 cut(s) 376, 1278, 1572
HpyF10VI GCNNNNNNNGC 4 cut(s) 791, 1560, 1961, 2135
HpyF3I CTNAG 9 cut(s) 9, 495, 642, 1059, 1131, 1443, 1743, 2049, 2264
HpySE526I ACGT 3 cut(s) 376, 1278, 1572
Hsp92II CATG 9 cut(s) 70, 230, 475, 1087, 1379, 1634, 1771, 1827, 2009
HspAI GCGC 1 cut(s) 961
KspAI GTTAAC 1 cut(s) 2476
Kzo9I GATC 9 cut(s) 241, 544, 581, 748, 757, 1982, 2044, 2251, 2409
LguI GCTCTTC 1 cut(s) 406
LmnI GCTCC 2 cut(s) 1466, 2370
Lsp1109I GCAGC 8 cut(s) 279, 409, 835, 838, 930, 1868, 1901, 2534
LweI GCATC 4 cut(s) 798, 1908, 1930, 2296
MabI ACCWGGT 1 cut(s) 944
MaeI CTAG 2 cut(s) 2042, 2256
MaeII ACGT 3 cut(s) 376, 1278, 1572
MaeIII GTNAC 4 cut(s) 4, 1395, 2036, 2358
MalI GATC 9 cut(s) 243, 546, 583, 750, 759, 1984, 2046, 2253, 2411
MboI GATC 9 cut(s) 241, 544, 581, 748, 757, 1982, 2044, 2251, 2409
MflI RGATCY 3 cut(s) 748, 1982, 2044
MhlI GDGCHC 3 cut(s) 171, 991, 1266
MlsI TGGCCA 1 cut(s) 1011
MluI ACGCGT 1 cut(s) 2355
MluNI TGGCCA 1 cut(s) 1011
MlyI GAGTC 3 cut(s) 1136, 1145, 2056
MmeI TCCRAC 4 cut(s) 679, 739, 1200, 1917
Mox20I TGGCCA 1 cut(s) 1011
Mph1103I ATGCAT 1 cut(s) 1850
MroXI GAANNNNTTC 2 cut(s) 75, 485
MscI TGGCCA 1 cut(s) 1011
MseI TTAA 6 cut(s) 954, 1032, 1149, 1718, 1917, 2475
MslI CAYNNNNRTG 4 cut(s) 1286, 1797, 1884, 1911
Msp20I TGGCCA 1 cut(s) 1011
MspA1I CMGCKG 1 cut(s) 422
MspI CCGG 3 cut(s) 985, 1893, 2499
MspR9I CCNGG 5 cut(s) 549, 946, 986, 1690, 2500
MvaI CCWGG 3 cut(s) 549, 946, 1690
MvnI CGCG 2 cut(s) 1911, 2357
MwoI GCNNNNNNNGC 4 cut(s) 791, 1560, 1961, 2135
NciI CCSGG 2 cut(s) 986, 2500
NdeII GATC 9 cut(s) 241, 544, 581, 748, 757, 1982, 2044, 2251, 2409
NlaIII CATG 9 cut(s) 70, 230, 475, 1087, 1379, 1634, 1771, 1827, 2009
NlaIV GGNNCC 5 cut(s) 750, 1075, 1462, 1780, 2029
NmuCI GTSAC 2 cut(s) 4, 1395
NsbI TGCGCA 1 cut(s) 962
NsiI ATGCAT 1 cut(s) 1850
NspI RCATGY 1 cut(s) 1379
OliI CACNNNNGTG 1 cut(s) 1884
PceI AGGCCT 1 cut(s) 2320
PciSI GCTCTTC 1 cut(s) 406
PdmI GAANNNNTTC 2 cut(s) 75, 485
PfoI TCCNGGA 1 cut(s) 1688
PkrI GCNGC 9 cut(s) 269, 284, 424, 850, 853, 920, 1858, 1891, 2524
PleI GAGTC 3 cut(s) 1135, 1144, 2056
PpsI GAGTC 3 cut(s) 1135, 1144, 2056
PpuMI RGGWCCY 2 cut(s) 1163, 1779
Psp5II RGGWCCY 2 cut(s) 1163, 1779
Psp6I CCWGG 3 cut(s) 547, 944, 1688
PspEI GGTNACC 2 cut(s) 1395, 2036
PspGI CCWGG 3 cut(s) 547, 944, 1688
PspN4I GGNNCC 5 cut(s) 750, 1075, 1462, 1780, 2029
PspPI GGNCC 4 cut(s) 1073, 1163, 1779, 1988
PspPPI RGGWCCY 2 cut(s) 1163, 1779
PstI CTGCAG 1 cut(s) 241
PsuI RGATCY 3 cut(s) 748, 1982, 2044
RsaI GTAC 8 cut(s) 364, 375, 1426, 1727, 2014, 2054, 2337, 2354
RsaNI GTAC 8 cut(s) 363, 374, 1425, 1726, 2013, 2053, 2336, 2353
RseI CAYNNNNRTG 4 cut(s) 1286, 1797, 1884, 1911
SapI GCTCTTC 1 cut(s) 406
SaqAI TTAA 6 cut(s) 954, 1032, 1149, 1718, 1917, 2475
SatI GCNGC 9 cut(s) 268, 283, 423, 849, 852, 919, 1857, 1890, 2523
Sau3AI GATC 9 cut(s) 241, 544, 581, 748, 757, 1982, 2044, 2251, 2409
Sau96I GGNCC 4 cut(s) 1073, 1163, 1779, 1988
SchI GAGTC 3 cut(s) 1136, 1145, 2056
ScrFI CCNGG 5 cut(s) 549, 946, 986, 1690, 2500
SduI GDGCHC 3 cut(s) 171, 991, 1266
SexAI ACCWGGT 1 cut(s) 944
SfaNI GCATC 4 cut(s) 798, 1908, 1930, 2296
SfcI CTRYAG 2 cut(s) 237, 1576
SinI GGWCC 4 cut(s) 1073, 1163, 1779, 1988
SmiMI CAYNNNNRTG 4 cut(s) 1286, 1797, 1884, 1911
SmlI CTYRAG 4 cut(s) 406, 1783, 2114, 2237
SmoI CTYRAG 4 cut(s) 406, 1783, 2114, 2237
SseBI AGGCCT 1 cut(s) 2320
SsiI CCGC 7 cut(s) 85, 195, 282, 420, 1909, 1991, 2177
SspI AATATT 1 cut(s) 454
SspMI CTAG 2 cut(s) 2042, 2256
StuI AGGCCT 1 cut(s) 2320
StyD4I CCNGG 5 cut(s) 547, 944, 984, 1688, 2498
TaaI ACNGT 5 cut(s) 362, 1730, 2070, 2340, 2473
TaiI ACGT 3 cut(s) 379, 1281, 1575
TaqI TCGA 2 cut(s) 257, 345
TatI WGTACW 3 cut(s) 2012, 2052, 2335
TauI GCSGC 1 cut(s) 285
Tru1I TTAA 6 cut(s) 954, 1032, 1149, 1718, 1917, 2475
Tru9I TTAA 6 cut(s) 954, 1032, 1149, 1718, 1917, 2475
TscAI CASTG 5 cut(s) 241, 358, 496, 895, 1447
TseFI GTSAC 2 cut(s) 4, 1395
TseI GCWGC 8 cut(s) 267, 422, 848, 851, 918, 1856, 1889, 2522
Tsp45I GTSAC 2 cut(s) 4, 1395
TspGWI ACGGA 1 cut(s) 2220
TspRI CASTG 5 cut(s) 241, 358, 496, 895, 1447
VpaK11BI GGWCC 4 cut(s) 1073, 1163, 1779, 1988
XceI RCATGY 1 cut(s) 1379
XcmI CCANNNNNNNNNTGG 1 cut(s) 1933
XmiI GTMKAC 1 cut(s) 1758
XmnI GAANNNNTTC 2 cut(s) 75, 485
XspI CTAG 2 cut(s) 2042, 2256
Zsp2I ATGCAT 1 cut(s) 1850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.