Rroxscaffold_159G00432840

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000159
OG0000413
Physical Location & Seq
Forward (+)
483930 .. 486029
2100 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_159G00432840.1

Sequence Viewer

Length: 2100 bp
ATGGAACATCTTCGTATCCCATTACTCTCTCTGCTTGTTTTTCTCCTCAACCTCTCATCCCTTCACTTTCTCTCTTTAGCTGATGATTATTTCATCAACTGTGGTTCACATGATAATGTGAGCCTCATTCCTGGCCAGAATTTCTCTGGGGAATCAAAGCCTGCAGGTTACACTTTCTCCAAAAGCAAGGCTGTCAAAGACATCAACCAGTTACCAGATATATCACCTCTATATAAGACAGCAAGAAGGTTCAATGAACCATTCTACTACCAGTTCAGCATCACTGAAGATGGTACTTATCTGGTACGCTTACATTTCTCAGCTTTCTCCTCCTCCTCCTCAAATAATCTCTCCACGGCTGTTTTTGGTGTTTTGGATTCTAAGAATTTCACACTGTTGAACAACTTCACTGCCAAGAACACTACCAAGTCCCCTGTGATAAAGGAATTCTTTCTCCAAATTGATATTACTGACTCATTTAGACTATATTTTACTCCTCAACCATCATCTTTTGCGTTTGTAAATGCCATAGAATTATTCCTTGCCCCTGCAGTAGATTTCATCGCTGAGAACTATACCAGTAATCTCCCTTTACACACAGTTTACAGACTCAACGTTGGAGGCTCAACAGTAAATGACACAATAGAGAGAAACTGGGAAACAGATGATAGTCATATTTCTGATGAAAACTCTGCAAAGAAAGCCCCTCCTCAAACACCCAATTTAAATTACCGCGGAAAAAGTTCTGGTTTGGTTGTATCTAATGAGTCTGTAGCCCCACTTTCGGTTTACCAGACTGCTAGAGAGATGATGAATGGCAGTAGTAACATAACATGGTTTTTTAGTGTGAGTAGTAAAGCTAGACACATTGTCCGGGCTCACTTCTGTGACATTGTTGGTCAGCCTGGTAACATTATATTTAACTTGTATGCAAATGGCAACTTCCGCAAGGAGATCGGCAACATTTCTCAATCTTCAATTTTTCAATATTCGGCTGTTCCCTTTTACTATGACTTTGTGGTGAATTATAGTGAGTCTGAACTCTCTAATATCAGCATAAGACCAAAGGATGGTGCTTTTGAACAAAATGCATTTCTCAATGGTCTGGAAATATTGGAGATAGTGGAGGGATTAGCTCCAACTCCCAATGTGAAAGAGTCCAAGAAGAAAGTTGTGGCTCCTGTGGTTGGTTCAGTTCTTGGAGGCCTGGCACTCATCTGCATTTTAATAGTTGGATTTGTGTTTGGTTTCATACACAGAAAGGCAGAAAAGCATGTGGAGACTTCAGTTTGGTCACCAATGCCTACAAATGGAGGAGGGAGTTCTCACAGCTCCGCTCTCAATCTAGATTATCTTGGGTTGAAGATATCTTTCAATGAAATTCAGTCTGCAACGAACAACTTTGACACAAAGTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGCACTCTTTTAAATGGCACAAAAGTGGCTGTGAAGCGAGCTTATAAGCGAGATGAGCATGGGTCAGGATCAGGCCAAGGCCTCCTAGAATTCGAAACAGAAATCATAGTGTTATCGAAAATCCGCCACCGCCATCTTATCTCCTTAATTGGTTACTGTAATGAAAGGTCTGAAATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGATCATTTGTATGATTCAGACGTGCCTCGCTTGTTGTGGAATCAAAGACTTGAAATTTGTACTGGCGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTAGGAGAATCATTCACCTAGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAGATCTGGAGCTCTCGATGAAACGCATGTCAGCACTAATGTTAAAGGCACTTTTGGTTACCTTGATCCTGAGTACATGATGTTTGAACAATTGACAGAAAAATCTGATGTTTACTCATTTGGTGTAGTTCTTCTTGAGGTGTTATGTGGAAGACTTGCTATTGATCTAACACTTCCAAGAGAGCAAATGAACTTGGCTGAATGGGGAATGTTTTGCAAGAAAAAAGGGTTGCTTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

699

Amino Acids

77.87

Weight (kDa)

6.39

Isoelectric Point (pI)

35.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 30 - 113 6.8e-07 Malectin domain
Malectin_like PF12819 33 - 373 2.1e-22 Malectin-like domain
Pkinase PF00069 471 - 674 3.7e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 472 - 669 2.9e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1497
Acc36I ACCTGC 1 cut(s) 155
AccB7I CCANNNNNTGG 1 cut(s) 1070
AccBSI CCGCTC 1 cut(s) 1337
AccII CGCG 1 cut(s) 735
AciI CCGC 6 cut(s) 733, 735, 946, 1335, 1576, 1582
AclI AACGTT 1 cut(s) 615
AclWI GGATC 2 cut(s) 1528, 1919
AcoI YGGCCR 1 cut(s) 133
AcsI RAATTY 6 cut(s) 139, 385, 446, 1380, 1541, 1722
AcuI CTGAAG 2 cut(s) 306, 1269
AfaI GTAC 4 cut(s) 295, 306, 1729, 1934
AfiI CCNNNNNNNGG 4 cut(s) 784, 1070, 1187, 1310
AhdI GACNNNNNGTC 1 cut(s) 869
AhlI ACTAGT 1 cut(s) 1633
AjiI CACGTC 1 cut(s) 1690
AjnI CCWGG 3 cut(s) 130, 904, 1206
AleI CACNNNNGTG 3 cut(s) 885, 1475, 1764
AluBI AGCT 8 cut(s) 80, 323, 860, 1136, 1332, 1493, 1772, 1871
AluI AGCT 8 cut(s) 80, 323, 860, 1136, 1332, 1493, 1772, 1871
Alw21I GWGCWC 1 cut(s) 1873
Alw26I GTCTC 1 cut(s) 1274
AlwI GGATC 2 cut(s) 1528, 1919
AoxI GGCC 5 cut(s) 133, 1204, 1525, 1531, 1852
ApeKI GCWGC 2 cut(s) 1736, 1769
ApoI RAATTY 6 cut(s) 139, 385, 446, 1380, 1541, 1722
ArsI GACNNNNNNTTYG 2 cut(s) 1707, 1739
Asp700I GAANNNNTTC 4 cut(s) 9, 404, 450, 742
AspLEI GCGC 1 cut(s) 1736
AsuC2I CCSGG 1 cut(s) 875
AsuHPI GGTGA 5 cut(s) 216, 1033, 1287, 1429, 1778
AsuII TTCGAA 1 cut(s) 1545
BaeI ACNNNNGTAYC 2 cut(s) 1622, 1655
BalI TGGCCA 1 cut(s) 135
BanII GRGCYC 2 cut(s) 880, 1873
BbsI GAAGAC 2 cut(s) 1739, 2017
Bbv12I GWGCWC 1 cut(s) 1873
BbvI GCAGC 2 cut(s) 1748, 1781
BccI CCATC 4 cut(s) 284, 511, 1064, 1593
BceAI ACGGC 1 cut(s) 372
BcgI CGANNNNNNTGC 2 cut(s) 937, 971
BciT130I CCWGG 3 cut(s) 132, 906, 1208
BciVI GTATCC 1 cut(s) 26
BcnI CCSGG 1 cut(s) 875
BcoDI GTCTC 1 cut(s) 1274
BcuI ACTAGT 1 cut(s) 1633
BfaI CTAG 7 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790
BfmI CTRYAG 3 cut(s) 162, 549, 771
BfuAI ACCTGC 1 cut(s) 155
BfuI GTATCC 1 cut(s) 26
BglII AGATCT 1 cut(s) 1862
BisI GCNGC 2 cut(s) 1737, 1770
BlsI GCNGC 2 cut(s) 1738, 1771
Bme1390I CCNGG 4 cut(s) 132, 875, 906, 1208
BmeRI GACNNNNNGTC 1 cut(s) 869
BmgBI CACGTC 1 cut(s) 1690
BmiI GGNNCC 1 cut(s) 1179
BmrFI CCNGG 4 cut(s) 132, 875, 906, 1208
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 1 cut(s) 288
BmuI ACTGGG 1 cut(s) 664
BpiI GAAGAC 2 cut(s) 1739, 2017
BpmI CTGGAG 1 cut(s) 1887
Bpu14I TTCGAA 1 cut(s) 1545
BpuEI CTTGAG 1 cut(s) 2015
BpuMI CCSGG 1 cut(s) 875
BsaJI CCNNGG 3 cut(s) 354, 733, 1528
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 4 cut(s) 784, 1070, 1187, 1310
Bse1I ACTGG 5 cut(s) 208, 271, 579, 659, 1735
BseBI CCWGG 3 cut(s) 132, 906, 1208
BseDI CCNNGG 3 cut(s) 354, 733, 1528
BseGI GGATG 2 cut(s) 56, 1075
BseLI CCNNNNNNNGG 4 cut(s) 784, 1070, 1187, 1310
BseMII CTCAG 3 cut(s) 333, 558, 1920
BseNI ACTGG 5 cut(s) 208, 271, 579, 659, 1735
BseRI GAGGAG 8 cut(s) 35, 319, 322, 325, 328, 486, 699, 1329
BseXI GCAGC 2 cut(s) 1748, 1781
BsgI GTGCAG 1 cut(s) 1788
Bsh1236I CGCG 1 cut(s) 735
BshFI GGCC 5 cut(s) 135, 1206, 1527, 1533, 1854
BsiHKAI GWGCWC 1 cut(s) 1873
BsiSI CCGG 1 cut(s) 874
BslFI GGGAC 2 cut(s) 415, 1672
BslI CCNNNNNNNGG 4 cut(s) 784, 1070, 1187, 1310
BsmAI GTCTC 1 cut(s) 1274
BsmFI GGGAC 2 cut(s) 415, 1672
BsnI GGCC 5 cut(s) 135, 1206, 1527, 1533, 1854
Bsp119I TTCGAA 1 cut(s) 1545
Bsp1286I GDGCHC 2 cut(s) 880, 1873
Bsp143I GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 2023
BspACI CCGC 6 cut(s) 733, 735, 946, 1335, 1576, 1582
BspANI GGCC 5 cut(s) 135, 1206, 1527, 1533, 1854
BspCNI CTCAG 3 cut(s) 332, 559, 1921
BspFNI CGCG 1 cut(s) 735
BspLI GGNNCC 1 cut(s) 1179
BspMAI CTGCAG 2 cut(s) 166, 553
BspMI ACCTGC 1 cut(s) 155
BspPI GGATC 2 cut(s) 1528, 1919
BspT104I TTCGAA 1 cut(s) 1545
BsrBI CCGCTC 1 cut(s) 1337
BsrI ACTGG 5 cut(s) 208, 271, 579, 659, 1735
BssECI CCNNGG 3 cut(s) 354, 733, 1528
BssMI GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 2023
BssT1I CCWWGG 1 cut(s) 1528
Bst2UI CCWGG 3 cut(s) 132, 906, 1208
Bst4CI ACNGT 5 cut(s) 101, 396, 601, 631, 1610
BstBI TTCGAA 1 cut(s) 1545
BstC8I GCNNGC 2 cut(s) 162, 1491
BstDEI CTNAG 4 cut(s) 319, 381, 567, 1929
BstDSI CCRYGG 2 cut(s) 354, 733
BstEII GGTNACC 2 cut(s) 1293, 1916
BstF5I GGATG 2 cut(s) 56, 1075
BstFNI CGCG 1 cut(s) 735
BstHHI GCGC 1 cut(s) 1736
BstKTI GATC 6 cut(s) 957, 1523, 1672, 1865, 1927, 2026
BstMAI GTCTC 1 cut(s) 1274
BstMBI GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 2023
BstMWI GCNNNNNNNGC 4 cut(s) 701, 945, 1507, 1841
BstNI CCWGG 3 cut(s) 132, 906, 1208
BstNSI RCATGY 2 cut(s) 1277, 1889
BstPI GGTNACC 2 cut(s) 1293, 1916
BstSCI CCNGG 4 cut(s) 130, 873, 904, 1206
BstSFI CTRYAG 3 cut(s) 162, 549, 771
BstUI CGCG 1 cut(s) 735
BstV1I GCAGC 2 cut(s) 1748, 1781
BstV2I GAAGAC 2 cut(s) 1739, 2017
BstX2I RGATCY 1 cut(s) 1862
BstYI RGATCY 1 cut(s) 1862
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 5 cut(s) 135, 1206, 1527, 1533, 1854
BtgI CCRYGG 2 cut(s) 354, 733
BtgZI GCGATG 1 cut(s) 547
BtrI CACGTC 1 cut(s) 1690
BtsCI GGATG 2 cut(s) 56, 1075
BtsI GCAGTG 1 cut(s) 408
BtsIMutI CAGTG 3 cut(s) 282, 392, 408
BveI ACCTGC 1 cut(s) 155
Cac8I GCNNGC 2 cut(s) 162, 1491
CfoI GCGC 1 cut(s) 1736
Cfr42I CCGCGG 1 cut(s) 736
Csp6I GTAC 4 cut(s) 294, 305, 1728, 1933
CviAII CATG 8 cut(s) 110, 834, 1274, 1511, 1648, 1829, 1886, 1936
CviQI GTAC 4 cut(s) 294, 305, 1728, 1933
DdeI CTNAG 4 cut(s) 319, 381, 567, 1929
DpnI GATC 6 cut(s) 956, 1522, 1671, 1864, 1926, 2025
DpnII GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 2023
DraI TTTAAA 2 cut(s) 726, 1464
DriI GACNNNNNGTC 1 cut(s) 869
EaeI YGGCCR 1 cut(s) 133
Eam1105I GACNNNNNGTC 1 cut(s) 869
EciI GGCGGA 1 cut(s) 1565
Ecl136II GAGCTC 1 cut(s) 1871
Eco130I CCWWGG 1 cut(s) 1528
Eco147I AGGCCT 2 cut(s) 1206, 1533
Eco24I GRGCYC 2 cut(s) 880, 1873
Eco32I GATATC 1 cut(s) 1368
Eco53kI GAGCTC 1 cut(s) 1871
Eco57I CTGAAG 2 cut(s) 306, 1269
Eco91I GGTNACC 2 cut(s) 1293, 1916
EcoICRI GAGCTC 1 cut(s) 1871
EcoO65I GGTNACC 2 cut(s) 1293, 1916
EcoRI GAATTC 2 cut(s) 446, 1541
EcoRII CCWGG 3 cut(s) 130, 904, 1206
EcoRV GATATC 1 cut(s) 1368
EcoT14I CCWWGG 1 cut(s) 1528
EcoT22I ATGCAT 1 cut(s) 1093
EcoT38I GRGCYC 2 cut(s) 880, 1873
ErhI CCWWGG 1 cut(s) 1528
FaeI CATG 8 cut(s) 113, 837, 1277, 1514, 1651, 1832, 1889, 1939
FalI AAGNNNNNCTT 5 cut(s) 434, 466, 1418, 1450, 2076
FaqI GGGAC 2 cut(s) 415, 1672
FatI CATG 8 cut(s) 109, 833, 1273, 1510, 1647, 1828, 1885, 1935
Fnu4HI GCNGC 2 cut(s) 1737, 1770
FokI GGATG 2 cut(s) 43, 1082
FriOI GRGCYC 2 cut(s) 880, 1873
Fsp4HI GCNGC 2 cut(s) 1737, 1770
FspBI CTAG 7 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790
GlaI GCGC 1 cut(s) 1735
GluI GCNGC 2 cut(s) 1737, 1770
GsuI CTGGAG 1 cut(s) 1887
HaeIII GGCC 5 cut(s) 135, 1206, 1527, 1533, 1854
HapII CCGG 1 cut(s) 874
HhaI GCGC 1 cut(s) 1736
Hin1II CATG 8 cut(s) 113, 837, 1277, 1514, 1651, 1832, 1889, 1939
Hin6I GCGC 1 cut(s) 1734
HinP1I GCGC 1 cut(s) 1734
HpaII CCGG 1 cut(s) 874
HphI GGTGA 5 cut(s) 216, 1033, 1287, 1429, 1778
Hpy166II GTNNAC 5 cut(s) 107, 604, 790, 1803, 1972
Hpy188I TCNGA 5 cut(s) 682, 1039, 1624, 1687, 1966
Hpy188III TCNNGA 8 cut(s) 1106, 1346, 1518, 1860, 1866, 1874, 1928, 1994
Hpy8I GTNNAC 5 cut(s) 107, 604, 790, 1803, 1972
HpyAV CCTTC 2 cut(s) 71, 240
HpyCH4III ACNGT 5 cut(s) 101, 396, 601, 631, 1610
HpyCH4IV ACGT 3 cut(s) 615, 1661, 1689
HpyCH4V TGCA 9 cut(s) 164, 551, 695, 932, 1091, 1221, 1391, 1769, 2076
HpyF10VI GCNNNNNNNGC 4 cut(s) 701, 945, 1507, 1841
HpyF3I CTNAG 4 cut(s) 319, 381, 567, 1929
HpySE526I ACGT 3 cut(s) 615, 1661, 1689
Hsp92II CATG 8 cut(s) 113, 837, 1277, 1514, 1651, 1832, 1889, 1939
HspAI GCGC 1 cut(s) 1734
KspI CCGCGG 1 cut(s) 736
Kzo9I GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 2023
LmnI GCTCC 4 cut(s) 1141, 1183, 1337, 1868
Lsp1109I GCAGC 2 cut(s) 1748, 1781
LweI GCATC 1 cut(s) 288
MaeI CTAG 7 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790
MaeII ACGT 3 cut(s) 615, 1661, 1689
MaeIII GTNAC 8 cut(s) 167, 210, 824, 887, 908, 1293, 1604, 1916
MalI GATC 6 cut(s) 956, 1522, 1671, 1864, 1926, 2025
MbiI CCGCTC 1 cut(s) 1337
MboI GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 2023
MboII GAAGA 7 cut(s) 299, 966, 1177, 1375, 1739, 1982, 2022
MfeI CAATTG 1 cut(s) 1949
MflI RGATCY 1 cut(s) 1862
MhlI GDGCHC 2 cut(s) 880, 1873
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 5 cut(s) 467, 603, 776, 1043, 1166
MmeI TCCRAC 3 cut(s) 598, 1163, 1213
Mox20I TGGCCA 1 cut(s) 135
Mph1103I ATGCAT 1 cut(s) 1093
MroXI GAANNNNTTC 4 cut(s) 9, 404, 450, 742
MscI TGGCCA 1 cut(s) 135
MseI TTAA 6 cut(s) 725, 921, 1226, 1463, 1598, 1902
MslI CAYNNNNRTG 6 cut(s) 114, 885, 1475, 1677, 1764, 1791
Msp20I TGGCCA 1 cut(s) 135
MspA1I CMGCKG 1 cut(s) 735
MspI CCGG 1 cut(s) 874
MspR9I CCNGG 4 cut(s) 132, 875, 906, 1208
MunI CAATTG 1 cut(s) 1949
MvaI CCWGG 3 cut(s) 132, 906, 1208
MvnI CGCG 1 cut(s) 735
MwoI GCNNNNNNNGC 4 cut(s) 701, 945, 1507, 1841
NciI CCSGG 1 cut(s) 875
NdeII GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 2023
NlaIII CATG 8 cut(s) 113, 837, 1277, 1514, 1651, 1832, 1889, 1939
NlaIV GGNNCC 1 cut(s) 1179
NmuCI GTSAC 2 cut(s) 887, 1293
NsiI ATGCAT 1 cut(s) 1093
NspI RCATGY 2 cut(s) 1277, 1889
NspV TTCGAA 1 cut(s) 1545
OliI CACNNNNGTG 3 cut(s) 885, 1475, 1764
PceI AGGCCT 2 cut(s) 1206, 1533
PdmI GAANNNNTTC 4 cut(s) 9, 404, 450, 742
PfeI GAWTC 5 cut(s) 152, 377, 1682, 1708, 1779
PflMI CCANNNNNTGG 1 cut(s) 1070
PkrI GCNGC 2 cut(s) 1738, 1771
PleI GAGTC 5 cut(s) 467, 603, 775, 1042, 1165
PpsI GAGTC 5 cut(s) 467, 603, 775, 1042, 1165
PsiI TTATAA 1 cut(s) 1497
Psp124BI GAGCTC 1 cut(s) 1873
Psp1406I AACGTT 1 cut(s) 615
Psp6I CCWGG 3 cut(s) 130, 904, 1206
PspEI GGTNACC 2 cut(s) 1293, 1916
PspGI CCWGG 3 cut(s) 130, 904, 1206
PspN4I GGNNCC 1 cut(s) 1179
PstI CTGCAG 2 cut(s) 166, 553
PsuI RGATCY 1 cut(s) 1862
RsaI GTAC 4 cut(s) 295, 306, 1729, 1934
RsaNI GTAC 4 cut(s) 294, 305, 1728, 1933
RseI CAYNNNNRTG 6 cut(s) 114, 885, 1475, 1677, 1764, 1791
SacI GAGCTC 1 cut(s) 1873
SacII CCGCGG 1 cut(s) 736
SaqAI TTAA 6 cut(s) 725, 921, 1226, 1463, 1598, 1902
SatI GCNGC 2 cut(s) 1737, 1770
Sau3AI GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 2023
SbfI CCTGCAGG 1 cut(s) 166
SchI GAGTC 5 cut(s) 467, 603, 776, 1043, 1166
ScrFI CCNGG 4 cut(s) 132, 875, 906, 1208
SdaI CCTGCAGG 1 cut(s) 166
SduI GDGCHC 2 cut(s) 880, 1873
SfaNI GCATC 1 cut(s) 288
SfcI CTRYAG 3 cut(s) 162, 549, 771
Sfr303I CCGCGG 1 cut(s) 736
SfuI TTCGAA 1 cut(s) 1545
SgrBI CCGCGG 1 cut(s) 736
SmiI ATTTAAAT 1 cut(s) 726
SmiMI CAYNNNNRTG 6 cut(s) 114, 885, 1475, 1677, 1764, 1791
SmlI CTYRAG 1 cut(s) 1994
SmoI CTYRAG 1 cut(s) 1994
SpeI ACTAGT 1 cut(s) 1633
Sse8387I CCTGCAGG 1 cut(s) 166
SseBI AGGCCT 2 cut(s) 1206, 1533
SsiI CCGC 6 cut(s) 733, 735, 946, 1335, 1576, 1582
SspI AATATT 2 cut(s) 989, 1113
SspMI CTAG 7 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790
SstI GAGCTC 1 cut(s) 1873
StuI AGGCCT 2 cut(s) 1206, 1533
StyD4I CCNGG 4 cut(s) 130, 873, 904, 1206
StyI CCWWGG 1 cut(s) 1528
SwaI ATTTAAAT 1 cut(s) 726
TaaI ACNGT 5 cut(s) 101, 396, 601, 631, 1610
TaiI ACGT 3 cut(s) 618, 1664, 1692
TaqI TCGA 4 cut(s) 1545, 1568, 1859, 1875
TatI WGTACW 2 cut(s) 1727, 1932
TfiI GAWTC 5 cut(s) 152, 377, 1682, 1708, 1779
Tru1I TTAA 6 cut(s) 725, 921, 1226, 1463, 1598, 1902
Tru9I TTAA 6 cut(s) 725, 921, 1226, 1463, 1598, 1902
TscAI CASTG 3 cut(s) 289, 399, 415
TseFI GTSAC 2 cut(s) 887, 1293
TseI GCWGC 2 cut(s) 1736, 1769
Tsp45I GTSAC 2 cut(s) 887, 1293
TspRI CASTG 3 cut(s) 289, 399, 415
Van91I CCANNNNNTGG 1 cut(s) 1070
XapI RAATTY 6 cut(s) 139, 385, 446, 1380, 1541, 1722
XbaI TCTAGA 1 cut(s) 1345
XceI RCATGY 2 cut(s) 1277, 1889
XcmI CCANNNNNNNNNTGG 1 cut(s) 143
XmnI GAANNNNTTC 4 cut(s) 9, 404, 450, 742
XspI CTAG 7 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790
Zsp2I ATGCAT 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.