ubiquitin-protein transferase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GUB_WAK_bind | PF13947 | 22 - 91 | 1.4e-15 | Wall-associated receptor kinase galacturonan-binding |
| zf-rbx1 | PF12678 | 323 - 369 | 9.3e-11 | RING-H2 zinc finger domain |
| zf-RING_2 | PF13639 | 326 - 369 | 2.8e-14 | Ring finger domain |
| zf-RING_11 | PF17123 | 327 - 355 | 1.8e-08 | RING-like zinc finger |
| zf-C3HC4_2 | PF13923 | 327 - 368 | 2.9e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4 | PF00097 | 327 - 368 | 9.6e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_5 | PF14634 | 327 - 369 | 6.6e-06 | zinc-RING finger domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 800 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 227, 449 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 158 |
| AccI | GTMKAC | 1 cut(s) | 209 |
| AccII | CGCG | 1 cut(s) | 281 |
| AciI | CCGC | 7 cut(s) | 57, 66, 127, 279, 301, 336, 845 |
| AclWI | GGATC | 1 cut(s) | 824 |
| AcoI | YGGCCR | 1 cut(s) | 993 |
| AcsI | RAATTY | 1 cut(s) | 104 |
| AfaI | GTAC | 3 cut(s) | 365, 402, 1001 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 90, 91, 144, 158, 841, 1009 |
| AflIII | ACRYGT | 2 cut(s) | 1058, 1091 |
| AgsI | TTSAA | 2 cut(s) | 376, 474 |
| AjnI | CCWGG | 5 cut(s) | 151, 312, 753, 763, 1002 |
| AluBI | AGCT | 3 cut(s) | 407, 536, 662 |
| AluI | AGCT | 3 cut(s) | 407, 536, 662 |
| Alw26I | GTCTC | 2 cut(s) | 167, 722 |
| AlwI | GGATC | 1 cut(s) | 824 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 629 |
| AoxI | GGCC | 5 cut(s) | 549, 739, 751, 895, 993 |
| ApeKI | GCWGC | 2 cut(s) | 288, 728 |
| ApoI | RAATTY | 1 cut(s) | 104 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 651 |
| AspLEI | GCGC | 2 cut(s) | 496, 787 |
| AspS9I | GGNCC | 2 cut(s) | 250, 310 |
| AsuHPI | GGTGA | 2 cut(s) | 823, 953 |
| AvaII | GGWCC | 2 cut(s) | 250, 310 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 356, 388 |
| BbvCI | CCTCAGC | 1 cut(s) | 431 |
| BbvI | GCAGC | 2 cut(s) | 275, 715 |
| BccI | CCATC | 3 cut(s) | 472, 514, 920 |
| BceAI | ACGGC | 3 cut(s) | 420, 469, 858 |
| BciT130I | CCWGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| BciVI | GTATCC | 2 cut(s) | 159, 933 |
| BcoDI | GTCTC | 2 cut(s) | 167, 722 |
| BfaI | CTAG | 1 cut(s) | 404 |
| BfuI | GTATCC | 2 cut(s) | 159, 933 |
| BisI | GCNGC | 3 cut(s) | 67, 289, 729 |
| BlsI | GCNGC | 3 cut(s) | 68, 290, 730 |
| BmcAI | AGTACT | 1 cut(s) | 402 |
| Bme1390I | CCNGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| Bme18I | GGWCC | 2 cut(s) | 250, 310 |
| BmgT120I | GGNCC | 2 cut(s) | 250, 310 |
| BmrFI | CCNGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| BmsI | GCATC | 4 cut(s) | 62, 246, 587, 892 |
| BpmI | CTGGAG | 1 cut(s) | 861 |
| Bpu10I | CCTNAGC | 1 cut(s) | 431 |
| BpuEI | CTTGAG | 1 cut(s) | 706 |
| Bsa29I | ATCGAT | 1 cut(s) | 263 |
| BsaI | GGTCTC | 2 cut(s) | 167, 722 |
| BsaJI | CCNNGG | 6 cut(s) | 88, 152, 754, 763, 764, 855 |
| BsaWI | WCCGGW | 1 cut(s) | 544 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 90, 91, 144, 158, 841, 1009 |
| Bse1I | ACTGG | 3 cut(s) | 468, 742, 878 |
| BseBI | CCWGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| BseCI | ATCGAT | 1 cut(s) | 263 |
| BseDI | CCNNGG | 6 cut(s) | 88, 152, 754, 763, 764, 855 |
| BseGI | GGATG | 2 cut(s) | 53, 464 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 90, 91, 144, 158, 841, 1009 |
| BseMII | CTCAG | 2 cut(s) | 445, 1033 |
| BseNI | ACTGG | 3 cut(s) | 468, 742, 878 |
| BseXI | GCAGC | 2 cut(s) | 275, 715 |
| Bsh1236I | CGCG | 1 cut(s) | 281 |
| BshFI | GGCC | 5 cut(s) | 551, 741, 753, 897, 995 |
| BshVI | ATCGAT | 1 cut(s) | 263 |
| BsiSI | CCGG | 1 cut(s) | 545 |
| BslFI | GGGAC | 2 cut(s) | 233, 1080 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 90, 91, 144, 158, 841, 1009 |
| BsmAI | GTCTC | 2 cut(s) | 167, 722 |
| BsmFI | GGGAC | 2 cut(s) | 233, 1080 |
| BsmI | GAATGC | 2 cut(s) | 1040, 1090 |
| BsnI | GGCC | 5 cut(s) | 551, 741, 753, 897, 995 |
| Bso31I | GGTCTC | 2 cut(s) | 167, 722 |
| Bsp143I | GATC | 3 cut(s) | 264, 511, 816 |
| BspACI | CCGC | 7 cut(s) | 57, 66, 127, 279, 301, 336, 845 |
| BspANI | GGCC | 5 cut(s) | 551, 741, 753, 897, 995 |
| BspCNI | CTCAG | 2 cut(s) | 444, 1032 |
| BspDI | ATCGAT | 1 cut(s) | 263 |
| BspFNI | CGCG | 1 cut(s) | 281 |
| BspPI | GGATC | 1 cut(s) | 824 |
| BspTNI | GGTCTC | 2 cut(s) | 167, 722 |
| BsrI | ACTGG | 3 cut(s) | 468, 742, 878 |
| BssECI | CCNNGG | 6 cut(s) | 88, 152, 754, 763, 764, 855 |
| BssMI | GATC | 3 cut(s) | 264, 511, 816 |
| BssT1I | CCWWGG | 1 cut(s) | 88 |
| Bst2UI | CCWGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| Bst4CI | ACNGT | 4 cut(s) | 363, 644, 859, 889 |
| BstC8I | GCNNGC | 1 cut(s) | 383 |
| BstDEI | CTNAG | 3 cut(s) | 431, 1019, 1076 |
| BstDSI | CCRYGG | 1 cut(s) | 855 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1007 |
| BstF5I | GGATG | 2 cut(s) | 53, 464 |
| BstFNI | CGCG | 1 cut(s) | 281 |
| BstHHI | GCGC | 2 cut(s) | 496, 787 |
| BstKTI | GATC | 3 cut(s) | 267, 514, 819 |
| BstMAI | GTCTC | 2 cut(s) | 167, 722 |
| BstMBI | GATC | 3 cut(s) | 264, 511, 816 |
| BstNI | CCWGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| BstNSI | RCATGY | 2 cut(s) | 171, 1062 |
| BstSCI | CCNGG | 5 cut(s) | 151, 312, 753, 763, 1002 |
| BstUI | CGCG | 1 cut(s) | 281 |
| BstV1I | GCAGC | 2 cut(s) | 275, 715 |
| BstX2I | RGATCY | 1 cut(s) | 816 |
| BstYI | RGATCY | 1 cut(s) | 816 |
| Bsu15I | ATCGAT | 1 cut(s) | 263 |
| BsuI | GTATCC | 2 cut(s) | 159, 933 |
| BsuRI | GGCC | 5 cut(s) | 551, 741, 753, 897, 995 |
| BsuTUI | ATCGAT | 1 cut(s) | 263 |
| BtgI | CCRYGG | 1 cut(s) | 855 |
| BtsCI | GGATG | 2 cut(s) | 53, 464 |
| BtsI | GCAGTG | 1 cut(s) | 399 |
| BtsIMutI | CAGTG | 3 cut(s) | 399, 630, 894 |
| Cac8I | GCNNGC | 1 cut(s) | 383 |
| CaiI | CAGNNNCTG | 1 cut(s) | 629 |
| CfoI | GCGC | 2 cut(s) | 496, 787 |
| Cfr13I | GGNCC | 2 cut(s) | 250, 310 |
| ClaI | ATCGAT | 1 cut(s) | 263 |
| CseI | GACGC | 1 cut(s) | 937 |
| Csp6I | GTAC | 3 cut(s) | 364, 401, 1000 |
| CviAII | CATG | 6 cut(s) | 168, 247, 307, 618, 1052, 1059 |
| CviQI | GTAC | 3 cut(s) | 364, 401, 1000 |
| DdeI | CTNAG | 3 cut(s) | 431, 1019, 1076 |
| DpnI | GATC | 3 cut(s) | 266, 513, 818 |
| DpnII | GATC | 3 cut(s) | 264, 511, 816 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 227, 449 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 227, 449 |
| EaeI | YGGCCR | 1 cut(s) | 993 |
| EciI | GGCGGA | 3 cut(s) | 46, 325, 860 |
| Eco130I | CCWWGG | 1 cut(s) | 88 |
| Eco147I | AGGCCT | 1 cut(s) | 753 |
| Eco31I | GGTCTC | 2 cut(s) | 167, 722 |
| Eco47I | GGWCC | 2 cut(s) | 250, 310 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1007 |
| EcoRII | CCWGG | 5 cut(s) | 151, 312, 753, 763, 1002 |
| EcoT14I | CCWWGG | 1 cut(s) | 88 |
| EcoT22I | ATGCAT | 1 cut(s) | 580 |
| ErhI | CCWWGG | 1 cut(s) | 88 |
| FaeI | CATG | 6 cut(s) | 171, 250, 310, 621, 1055, 1062 |
| FaqI | GGGAC | 2 cut(s) | 233, 1080 |
| FatI | CATG | 6 cut(s) | 167, 246, 306, 617, 1051, 1058 |
| FblI | GTMKAC | 1 cut(s) | 209 |
| Fnu4HI | GCNGC | 3 cut(s) | 67, 289, 729 |
| FokI | GGATG | 2 cut(s) | 40, 451 |
| Fsp4HI | GCNGC | 3 cut(s) | 67, 289, 729 |
| FspBI | CTAG | 1 cut(s) | 404 |
| GlaI | GCGC | 2 cut(s) | 495, 786 |
| GluI | GCNGC | 3 cut(s) | 67, 289, 729 |
| GsuI | CTGGAG | 1 cut(s) | 861 |
| HaeIII | GGCC | 5 cut(s) | 551, 741, 753, 897, 995 |
| HapII | CCGG | 1 cut(s) | 545 |
| HgaI | GACGC | 1 cut(s) | 937 |
| HhaI | GCGC | 2 cut(s) | 496, 787 |
| Hin1II | CATG | 6 cut(s) | 171, 250, 310, 621, 1055, 1062 |
| Hin6I | GCGC | 2 cut(s) | 494, 785 |
| HinP1I | GCGC | 2 cut(s) | 494, 785 |
| HincII | GTYRAC | 1 cut(s) | 232 |
| HindII | GTYRAC | 1 cut(s) | 232 |
| HindIII | AAGCTT | 1 cut(s) | 534 |
| HinfI | GANTC | 7 cut(s) | 134, 332, 676, 759, 777, 917, 931 |
| HpaII | CCGG | 1 cut(s) | 545 |
| HphI | GGTGA | 2 cut(s) | 823, 953 |
| Hpy166II | GTNNAC | 3 cut(s) | 210, 232, 359 |
| Hpy188I | TCNGA | 3 cut(s) | 511, 525, 583 |
| Hpy188III | TCNNGA | 1 cut(s) | 1021 |
| Hpy8I | GTNNAC | 3 cut(s) | 210, 232, 359 |
| Hpy99I | CGWCG | 2 cut(s) | 490, 953 |
| HpyAV | CCTTC | 1 cut(s) | 349 |
| HpyCH4III | ACNGT | 4 cut(s) | 363, 644, 859, 889 |
| HpyCH4IV | ACGT | 1 cut(s) | 1091 |
| HpyCH4V | TGCA | 5 cut(s) | 81, 578, 731, 1038, 1088 |
| HpyF3I | CTNAG | 3 cut(s) | 431, 1019, 1076 |
| HpySE526I | ACGT | 1 cut(s) | 1091 |
| Hsp92II | CATG | 6 cut(s) | 171, 250, 310, 621, 1055, 1062 |
| HspAI | GCGC | 2 cut(s) | 494, 785 |
| Kzo9I | GATC | 3 cut(s) | 264, 511, 816 |
| LmnI | GCTCC | 1 cut(s) | 712 |
| Lsp1109I | GCAGC | 2 cut(s) | 275, 715 |
| LweI | GCATC | 4 cut(s) | 62, 246, 587, 892 |
| MaeI | CTAG | 1 cut(s) | 404 |
| MaeII | ACGT | 1 cut(s) | 1091 |
| MaeIII | GTNAC | 4 cut(s) | 196, 638, 859, 883 |
| MalI | GATC | 3 cut(s) | 266, 513, 818 |
| MboI | GATC | 3 cut(s) | 264, 511, 816 |
| MboII | GAAGA | 5 cut(s) | 19, 22, 25, 217, 364 |
| MfeI | CAATTG | 1 cut(s) | 376 |
| MflI | RGATCY | 1 cut(s) | 816 |
| MluCI | AATT | 5 cut(s) | 104, 376, 474, 744, 1108 |
| MlyI | GAGTC | 3 cut(s) | 128, 685, 925 |
| MmeI | TCCRAC | 1 cut(s) | 440 |
| MnlI | CCTC | 8 cut(s) | 54, 70, 302, 335, 433, 440, 807, 885 |
| Mph1103I | ATGCAT | 1 cut(s) | 580 |
| MroXI | GAANNNNTTC | 1 cut(s) | 651 |
| MseI | TTAA | 2 cut(s) | 102, 597 |
| MslI | CAYNNNNRTG | 2 cut(s) | 76, 458 |
| MspI | CCGG | 1 cut(s) | 545 |
| MspR9I | CCNGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| MunI | CAATTG | 1 cut(s) | 376 |
| Mva1269I | GAATGC | 2 cut(s) | 1040, 1090 |
| MvaI | CCWGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| MvnI | CGCG | 1 cut(s) | 281 |
| NdeII | GATC | 3 cut(s) | 264, 511, 816 |
| NlaIII | CATG | 6 cut(s) | 171, 250, 310, 621, 1055, 1062 |
| NmeAIII | GCCGAG | 1 cut(s) | 1021 |
| NmuCI | GTSAC | 2 cut(s) | 196, 883 |
| NsiI | ATGCAT | 1 cut(s) | 580 |
| NspI | RCATGY | 2 cut(s) | 171, 1062 |
| PasI | CCCWGGG | 1 cut(s) | 764 |
| PceI | AGGCCT | 1 cut(s) | 753 |
| PciI | ACATGT | 1 cut(s) | 1058 |
| PctI | GAATGC | 2 cut(s) | 1040, 1090 |
| PdmI | GAANNNNTTC | 1 cut(s) | 651 |
| PfeI | GAWTC | 4 cut(s) | 332, 759, 777, 917 |
| PflFI | GACNNNGTC | 1 cut(s) | 254 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 158 |
| PkrI | GCNGC | 3 cut(s) | 68, 290, 730 |
| PleI | GAGTC | 3 cut(s) | 128, 684, 925 |
| PpsI | GAGTC | 3 cut(s) | 128, 684, 925 |
| PscI | ACATGT | 1 cut(s) | 1058 |
| PsiI | TTATAA | 1 cut(s) | 800 |
| Psp6I | CCWGG | 5 cut(s) | 151, 312, 753, 763, 1002 |
| PspGI | CCWGG | 5 cut(s) | 151, 312, 753, 763, 1002 |
| PspPI | GGNCC | 2 cut(s) | 250, 310 |
| PstNI | CAGNNNCTG | 1 cut(s) | 629 |
| PsuI | RGATCY | 1 cut(s) | 816 |
| PsyI | GACNNNGTC | 1 cut(s) | 254 |
| RsaI | GTAC | 3 cut(s) | 365, 402, 1001 |
| RsaNI | GTAC | 3 cut(s) | 364, 401, 1000 |
| RseI | CAYNNNNRTG | 2 cut(s) | 76, 458 |
| SaqAI | TTAA | 2 cut(s) | 102, 597 |
| SatI | GCNGC | 3 cut(s) | 67, 289, 729 |
| Sau3AI | GATC | 3 cut(s) | 264, 511, 816 |
| Sau96I | GGNCC | 2 cut(s) | 250, 310 |
| ScaI | AGTACT | 1 cut(s) | 402 |
| SchI | GAGTC | 3 cut(s) | 128, 685, 925 |
| ScrFI | CCNGG | 5 cut(s) | 153, 314, 755, 765, 1004 |
| SfaNI | GCATC | 4 cut(s) | 62, 246, 587, 892 |
| SinI | GGWCC | 2 cut(s) | 250, 310 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 76, 458 |
| SmlI | CTYRAG | 1 cut(s) | 721 |
| SmoI | CTYRAG | 1 cut(s) | 721 |
| Sse9I | AATT | 5 cut(s) | 104, 376, 474, 744, 1108 |
| SseBI | AGGCCT | 1 cut(s) | 753 |
| SsiI | CCGC | 7 cut(s) | 57, 66, 127, 279, 301, 336, 845 |
| SspI | AATATT | 1 cut(s) | 595 |
| SspMI | CTAG | 1 cut(s) | 404 |
| StuI | AGGCCT | 1 cut(s) | 753 |
| StyD4I | CCNGG | 5 cut(s) | 151, 312, 753, 763, 1002 |
| StyI | CCWWGG | 1 cut(s) | 88 |
| TaaI | ACNGT | 4 cut(s) | 363, 644, 859, 889 |
| TaiI | ACGT | 1 cut(s) | 1094 |
| TaqI | TCGA | 8 cut(s) | 240, 263, 270, 530, 667, 915, 951, 1105 |
| TasI | AATT | 5 cut(s) | 104, 376, 474, 744, 1108 |
| TatI | WGTACW | 2 cut(s) | 363, 400 |
| TauI | GCSGC | 1 cut(s) | 69 |
| TfiI | GAWTC | 4 cut(s) | 332, 759, 777, 917 |
| Tru1I | TTAA | 2 cut(s) | 102, 597 |
| Tru9I | TTAA | 2 cut(s) | 102, 597 |
| TscAI | CASTG | 3 cut(s) | 399, 630, 894 |
| TseFI | GTSAC | 2 cut(s) | 196, 883 |
| TseI | GCWGC | 2 cut(s) | 288, 728 |
| Tsp45I | GTSAC | 2 cut(s) | 196, 883 |
| TspDTI | ATGAA | 4 cut(s) | 295, 644, 882, 1040 |
| TspRI | CASTG | 3 cut(s) | 399, 630, 894 |
| Tth111I | GACNNNGTC | 1 cut(s) | 254 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 158 |
| VpaK11BI | GGWCC | 2 cut(s) | 250, 310 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1007 |
| XapI | RAATTY | 1 cut(s) | 104 |
| XceI | RCATGY | 2 cut(s) | 171, 1062 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 935 |
| XmiI | GTMKAC | 1 cut(s) | 209 |
| XmnI | GAANNNNTTC | 1 cut(s) | 651 |
| XspI | CTAG | 1 cut(s) | 404 |
| ZrmI | AGTACT | 1 cut(s) | 402 |
| Zsp2I | ATGCAT | 1 cut(s) | 580 |