FvH4_7g28660

Carboxylesterase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000860
Physical Location & Seq
Forward (+)
21208974 .. 21210193
1220 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g28660.t1

Sequence Viewer

Length: 1002 bp
ATGTCAAATGAAAGGGCAGCAGCGGATACCAATCCCAATTCCGGCGTTGATCCTTACCAGCGTCTCCAATTAGCACGCAATCCCGACGGCAGCATCACGCGCTTGTATAAATGTCCAGACGCGCCGCCCTCATCTGATCCTAAGCTTCCCACTCCGGTTCTATCCAAAGACATCCCCATCAACCAATCAAACAACACCTGGCTTCGACTGTTCCTTCCCCGCCATGTACTAGACCAAACCTCACCAACTAATAAGCTTCCTCTCGTCGTTTATTACCATGGTGGAGGCTTCGTAATACTTAGTGCATCCTCCACCATTTTCCATCATTTCTGTTCCAATTTTGCAGCCGACGTCCCCGTGATCATCGCATCTGTCGAGTACAGGCTGGCTCCTGAGCACCGGCTGCCGGCGGCTTATGATGATGCAGTGGAGGCGCTTCACTGGATCAAAACAAACCAAGATGATTGGTTGAGGGACTTTGCTGACCTCTCCAATTGTTTCCTAATGGGATCCAGTGCTGGGGCTAACATAGCCTACAATGCAGGACTGCGTGTGGCTGCCGAGCGGGGTGACACTCTCCACCCTTTGAAAATAAGAGGGCTGATATTGATCCAACCGTTCTTCGGTGGTATCCGAAGGACTAGCTCGGAGTTGAGGCTAGTGCACGACCCTATTCTGGCGCTAAGTGTATGTGATCTCATGTGGGAATTGTCGTTGCCTTCCGGGGCTGACCGTGATCATGAGTATTGCAATCCAATGGCGGCCGGAGGCGATTCTAAATGCTTCGATCAAGTGAAAGCACTTGGCTGGAGAGTTTTGGTGACTGGCTCTGAGGGAGACCCGCTGGTCGACCGTCAGATTGAGATGGTGAAGATGTTGGAGGAGAAGGGTGTCCAAGTTGTGAGTCAGTTCATTGAAGGAGGTTATCATGGGGCTCAGGATGTTGAACCCTCCAAAGCCAAGCCAGTGTTTGAACTTGTTAAACCTTTCATATTTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

334

Amino Acids

36.76

Weight (kDa)

5.68

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 71 - 178 6.2e-07 Carboxylesterase family
BD-FAE PF20434 82 - 186 2.2e-13 BD-FAE
Abhydrolase_3 PF07859 89 - 312 8.6e-53 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 845
AatII GACGTC 1 cut(s) 354
AccBSI CCGCTC 1 cut(s) 565
AccI GTMKAC 1 cut(s) 849
AccII CGCG 2 cut(s) 100, 122
AciI CCGC 7 cut(s) 23, 125, 220, 410, 565, 761, 842
AclWI GGATC 6 cut(s) 44, 131, 452, 504, 517, 604
AcoI YGGCCR 1 cut(s) 762
AcyI GRCGYC 1 cut(s) 351
AfaI GTAC 2 cut(s) 228, 380
AfiI CCNNNNNNNGG 5 cut(s) 41, 406, 519, 623, 676
AgsI TTSAA 4 cut(s) 589, 917, 947, 974
AjnI CCWGG 1 cut(s) 197
AluBI AGCT 3 cut(s) 145, 256, 645
AluI AGCT 3 cut(s) 145, 256, 645
Alw21I GWGCWC 2 cut(s) 399, 666
Alw26I GTCTC 2 cut(s) 68, 831
Alw44I GTGCAC 1 cut(s) 662
AlwI GGATC 6 cut(s) 44, 131, 452, 504, 517, 604
AoxI GGCC 1 cut(s) 762
ApaLI GTGCAC 1 cut(s) 662
ApeKI GCWGC 6 cut(s) 17, 20, 90, 344, 403, 557
AspLEI GCGC 4 cut(s) 102, 124, 436, 682
AsuC2I CCSGG 1 cut(s) 724
AsuHPI GGTGA 4 cut(s) 234, 581, 832, 880
BaeGI GKGCMC 1 cut(s) 666
BamHI GGATCC 1 cut(s) 509
BanII GRGCYC 1 cut(s) 937
Bbv12I GWGCWC 2 cut(s) 399, 666
BbvI GCAGC 6 cut(s) 29, 32, 102, 356, 390, 544
BccI CCATC 3 cut(s) 185, 330, 859
BceAI ACGGC 1 cut(s) 103
BciT130I CCWGG 1 cut(s) 199
BciVI GTATCC 2 cut(s) 19, 641
BclI TGATCA 2 cut(s) 360, 736
BcnI CCSGG 1 cut(s) 724
BcoDI GTCTC 2 cut(s) 68, 831
BfaI CTAG 3 cut(s) 230, 642, 659
BfoI RGCGCY 2 cut(s) 437, 683
BfuI GTATCC 2 cut(s) 19, 641
BisI GCNGC 9 cut(s) 18, 21, 91, 125, 345, 404, 411, 558, 762
BlsI GCNGC 9 cut(s) 19, 22, 92, 126, 346, 405, 412, 559, 763
Bme1390I CCNGG 2 cut(s) 199, 724
BmiI GGNNCC 2 cut(s) 390, 511
BmrFI CCNGG 2 cut(s) 199, 724
BmsI GCATC 4 cut(s) 102, 314, 377, 412
BpmI CTGGAG 1 cut(s) 829
Bpu10I CCTNAGC 3 cut(s) 141, 393, 936
BpuMI CCSGG 1 cut(s) 724
BsaBI GATNNNNATC 2 cut(s) 30, 608
BsaHI GRCGYC 1 cut(s) 351
BsaI GGTCTC 1 cut(s) 831
BsaJI CCNNGG 2 cut(s) 277, 723
BsaWI WCCGGW 1 cut(s) 154
BsaXI ACNNNNNCTCC 2 cut(s) 276, 306
Bsc4I CCNNNNNNNGG 5 cut(s) 41, 406, 519, 623, 676
Bse118I RCCGGY 2 cut(s) 399, 406
Bse1I ACTGG 4 cut(s) 446, 513, 829, 965
Bse8I GATNNNNATC 2 cut(s) 30, 608
BseBI CCWGG 1 cut(s) 199
BseDI CCNNGG 2 cut(s) 277, 723
BseGI GGATG 3 cut(s) 171, 305, 946
BseJI GATNNNNATC 2 cut(s) 30, 608
BseLI CCNNNNNNNGG 5 cut(s) 41, 406, 519, 623, 676
BseMII CTCAG 3 cut(s) 384, 822, 950
BseNI ACTGG 4 cut(s) 446, 513, 829, 965
BseRI GAGGAG 1 cut(s) 896
BseSI GKGCMC 1 cut(s) 666
BseX3I CGGCCG 1 cut(s) 762
BseXI GCAGC 6 cut(s) 29, 32, 102, 356, 390, 544
BseYI CCCAGC 1 cut(s) 518
Bsh1236I CGCG 2 cut(s) 100, 122
Bsh1285I CGRYCG 2 cut(s) 765, 853
BshFI GGCC 1 cut(s) 764
BsiEI CGRYCG 2 cut(s) 765, 853
BsiHKAI GWGCWC 2 cut(s) 399, 666
BsiSI CCGG 6 cut(s) 42, 155, 400, 407, 723, 765
BslFI GGGAC 2 cut(s) 338, 488
BslI CCNNNNNNNGG 5 cut(s) 41, 406, 519, 623, 676
BsmAI GTCTC 2 cut(s) 68, 831
BsmBI CGTCTC 1 cut(s) 68
BsmFI GGGAC 2 cut(s) 338, 488
BsnI GGCC 1 cut(s) 764
Bso31I GGTCTC 1 cut(s) 831
Bsp1286I GDGCHC 3 cut(s) 399, 666, 937
Bsp143I GATC 9 cut(s) 49, 136, 360, 444, 509, 609, 694, 736, 787
Bsp19I CCATGG 1 cut(s) 277
BspACI CCGC 7 cut(s) 23, 125, 220, 410, 565, 761, 842
BspANI GGCC 1 cut(s) 764
BspCNI CTCAG 3 cut(s) 385, 823, 949
BspFNI CGCG 2 cut(s) 100, 122
BspHI TCATGA 1 cut(s) 739
BspLI GGNNCC 2 cut(s) 390, 511
BspPI GGATC 6 cut(s) 44, 131, 452, 504, 517, 604
BspTNI GGTCTC 1 cut(s) 831
BsrBI CCGCTC 1 cut(s) 565
BsrFI RCCGGY 2 cut(s) 399, 406
BsrI ACTGG 4 cut(s) 446, 513, 829, 965
BssAI RCCGGY 2 cut(s) 399, 406
BssECI CCNNGG 2 cut(s) 277, 723
BssMI GATC 9 cut(s) 49, 136, 360, 444, 509, 609, 694, 736, 787
BssNI GRCGYC 1 cut(s) 351
BssT1I CCWWGG 1 cut(s) 277
Bst2UI CCWGG 1 cut(s) 199
Bst4CI ACNGT 4 cut(s) 210, 618, 734, 854
BstACI GRCGYC 1 cut(s) 351
BstAPI GCANNNNNTGC 1 cut(s) 403
BstC8I GCNNGC 3 cut(s) 76, 387, 408
BstDEI CTNAG 6 cut(s) 141, 299, 393, 683, 831, 936
BstDSI CCRYGG 1 cut(s) 277
BstF5I GGATG 3 cut(s) 171, 305, 946
BstFNI CGCG 2 cut(s) 100, 122
BstH2I RGCGCY 2 cut(s) 437, 683
BstHHI GCGC 4 cut(s) 102, 124, 436, 682
BstKTI GATC 9 cut(s) 52, 139, 363, 447, 512, 612, 697, 739, 790
BstMAI GTCTC 2 cut(s) 68, 831
BstMBI GATC 9 cut(s) 49, 136, 360, 444, 509, 609, 694, 736, 787
BstMCI CGRYCG 2 cut(s) 765, 853
BstMWI GCNNNNNNNGC 5 cut(s) 99, 403, 431, 530, 539
BstNI CCWGG 1 cut(s) 199
BstSCI CCNGG 2 cut(s) 197, 722
BstSLI GKGCMC 1 cut(s) 666
BstUI CGCG 2 cut(s) 100, 122
BstV1I GCAGC 6 cut(s) 29, 32, 102, 356, 390, 544
BstX2I RGATCY 1 cut(s) 509
BstYI RGATCY 1 cut(s) 509
BstZI CGGCCG 1 cut(s) 762
BsuI GTATCC 2 cut(s) 19, 641
BsuRI GGCC 1 cut(s) 764
BtgI CCRYGG 1 cut(s) 277
BtgZI GCGATG 1 cut(s) 349
BtsCI GGATG 3 cut(s) 171, 305, 946
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 4 cut(s) 432, 439, 520, 972
Cac8I GCNNGC 3 cut(s) 76, 387, 408
CciI TCATGA 1 cut(s) 739
CfoI GCGC 4 cut(s) 102, 124, 436, 682
Cfr10I RCCGGY 2 cut(s) 399, 406
CseI GACGC 2 cut(s) 50, 128
Csp6I GTAC 2 cut(s) 227, 379
CviAII CATG 5 cut(s) 224, 278, 700, 740, 929
CviQI GTAC 2 cut(s) 227, 379
DdeI CTNAG 6 cut(s) 141, 299, 393, 683, 831, 936
DpnI GATC 9 cut(s) 51, 138, 362, 446, 511, 611, 696, 738, 789
DpnII GATC 9 cut(s) 49, 136, 360, 444, 509, 609, 694, 736, 787
DrdI GACNNNNNNGTC 1 cut(s) 845
DseDI GACNNNNNNGTC 1 cut(s) 845
EaeI YGGCCR 1 cut(s) 762
EagI CGGCCG 1 cut(s) 762
EclXI CGGCCG 1 cut(s) 762
Eco130I CCWWGG 1 cut(s) 277
Eco24I GRGCYC 1 cut(s) 937
Eco31I GGTCTC 1 cut(s) 831
Eco52I CGGCCG 1 cut(s) 762
EcoRII CCWGG 1 cut(s) 197
EcoT14I CCWWGG 1 cut(s) 277
EcoT38I GRGCYC 1 cut(s) 937
ErhI CCWWGG 1 cut(s) 277
Esp3I CGTCTC 1 cut(s) 68
FaeI CATG 5 cut(s) 227, 281, 703, 743, 932
FaqI GGGAC 2 cut(s) 338, 488
FatI CATG 5 cut(s) 223, 277, 699, 739, 928
FauI CCCGC 3 cut(s) 227, 558, 849
FbaI TGATCA 2 cut(s) 360, 736
FblI GTMKAC 1 cut(s) 849
Fnu4HI GCNGC 9 cut(s) 18, 21, 91, 125, 345, 404, 411, 558, 762
FokI GGATG 3 cut(s) 158, 292, 953
FriOI GRGCYC 1 cut(s) 937
Fsp4HI GCNGC 9 cut(s) 18, 21, 91, 125, 345, 404, 411, 558, 762
FspBI CTAG 3 cut(s) 230, 642, 659
GlaI GCGC 4 cut(s) 101, 123, 435, 681
GluI GCNGC 9 cut(s) 18, 21, 91, 125, 345, 404, 411, 558, 762
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 1 cut(s) 829
HaeII RGCGCY 2 cut(s) 437, 683
HaeIII GGCC 1 cut(s) 764
HapII CCGG 6 cut(s) 42, 155, 400, 407, 723, 765
HgaI GACGC 2 cut(s) 50, 128
HhaI GCGC 4 cut(s) 102, 124, 436, 682
Hin1I GRCGYC 1 cut(s) 351
Hin1II CATG 5 cut(s) 227, 281, 703, 743, 932
Hin6I GCGC 4 cut(s) 100, 122, 434, 680
HinP1I GCGC 4 cut(s) 100, 122, 434, 680
HincII GTYRAC 1 cut(s) 850
HindII GTYRAC 1 cut(s) 850
HindIII AAGCTT 2 cut(s) 143, 254
HinfI GANTC 2 cut(s) 773, 904
HpaII CCGG 6 cut(s) 42, 155, 400, 407, 723, 765
HphI GGTGA 4 cut(s) 234, 581, 832, 880
Hpy166II GTNNAC 2 cut(s) 664, 850
Hpy188I TCNGA 5 cut(s) 136, 635, 649, 832, 858
Hpy188III TCNNGA 5 cut(s) 83, 116, 392, 740, 938
Hpy8I GTNNAC 2 cut(s) 664, 850
Hpy99I CGWCG 3 cut(s) 89, 269, 353
HpyAV CCTTC 5 cut(s) 224, 630, 729, 880, 911
HpyCH4III ACNGT 4 cut(s) 210, 618, 734, 854
HpyCH4IV ACGT 1 cut(s) 351
HpyCH4V TGCA 6 cut(s) 305, 344, 425, 542, 664, 750
HpyF10VI GCNNNNNNNGC 5 cut(s) 99, 403, 431, 530, 539
HpyF3I CTNAG 6 cut(s) 141, 299, 393, 683, 831, 936
HpySE526I ACGT 1 cut(s) 351
Hsp92I GRCGYC 1 cut(s) 351
Hsp92II CATG 5 cut(s) 227, 281, 703, 743, 932
HspAI GCGC 4 cut(s) 100, 122, 434, 680
KroI GCCGGC 1 cut(s) 406
KroNI GCCGGC 1 cut(s) 408
Ksp22I TGATCA 2 cut(s) 360, 736
Kzo9I GATC 9 cut(s) 49, 136, 360, 444, 509, 609, 694, 736, 787
LmnI GCTCC 1 cut(s) 394
Lsp1109I GCAGC 6 cut(s) 29, 32, 102, 356, 390, 544
LweI GCATC 4 cut(s) 102, 314, 377, 412
MaeI CTAG 3 cut(s) 230, 642, 659
MaeII ACGT 1 cut(s) 351
MaeIII GTNAC 2 cut(s) 569, 820
MalI GATC 9 cut(s) 51, 138, 362, 446, 511, 611, 696, 738, 789
MbiI CCGCTC 1 cut(s) 565
MboI GATC 9 cut(s) 49, 136, 360, 444, 509, 609, 694, 736, 787
MboII GAAGA 2 cut(s) 613, 883
MfeI CAATTG 1 cut(s) 493
MflI RGATCY 1 cut(s) 509
MhlI GDGCHC 3 cut(s) 399, 666, 937
MluCI AATT 5 cut(s) 37, 68, 337, 493, 707
MlyI GAGTC 1 cut(s) 913
MmeI TCCRAC 2 cut(s) 637, 858
MroNI GCCGGC 1 cut(s) 406
MseI TTAA 2 cut(s) 981, 1000
MspA1I CMGCKG 2 cut(s) 23, 844
MspI CCGG 6 cut(s) 42, 155, 400, 407, 723, 765
MspR9I CCNGG 2 cut(s) 199, 724
MunI CAATTG 1 cut(s) 493
MvaI CCWGG 1 cut(s) 199
MvnI CGCG 2 cut(s) 100, 122
MwoI GCNNNNNNNGC 5 cut(s) 99, 403, 431, 530, 539
NaeI GCCGGC 1 cut(s) 408
NciI CCSGG 1 cut(s) 724
NcoI CCATGG 1 cut(s) 277
NdeII GATC 9 cut(s) 49, 136, 360, 444, 509, 609, 694, 736, 787
NgoMIV GCCGGC 1 cut(s) 406
NlaIII CATG 5 cut(s) 227, 281, 703, 743, 932
NlaIV GGNNCC 2 cut(s) 390, 511
NmeAIII GCCGAG 1 cut(s) 586
NmuCI GTSAC 2 cut(s) 569, 820
PagI TCATGA 1 cut(s) 739
PcsI WCGNNNNNNNCGW 1 cut(s) 372
PdiI GCCGGC 1 cut(s) 408
PfeI GAWTC 1 cut(s) 773
PkrI GCNGC 9 cut(s) 19, 22, 92, 126, 346, 405, 412, 559, 763
PleI GAGTC 1 cut(s) 912
PpsI GAGTC 1 cut(s) 912
Psp6I CCWGG 1 cut(s) 197
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 1 cut(s) 197
PspN4I GGNNCC 2 cut(s) 390, 511
PsuI RGATCY 1 cut(s) 509
RsaI GTAC 2 cut(s) 228, 380
RsaNI GTAC 2 cut(s) 227, 379
SalI GTCGAC 1 cut(s) 848
SaqAI TTAA 2 cut(s) 981, 1000
SatI GCNGC 9 cut(s) 18, 21, 91, 125, 345, 404, 411, 558, 762
Sau3AI GATC 9 cut(s) 49, 136, 360, 444, 509, 609, 694, 736, 787
SchI GAGTC 1 cut(s) 913
ScrFI CCNGG 2 cut(s) 199, 724
SduI GDGCHC 3 cut(s) 399, 666, 937
SetI ASST 9 cut(s) 147, 200, 242, 258, 354, 489, 647, 925, 988
SfaNI GCATC 4 cut(s) 102, 314, 377, 412
Sse9I AATT 5 cut(s) 37, 68, 337, 493, 707
SsiI CCGC 7 cut(s) 23, 125, 220, 410, 565, 761, 842
SspMI CTAG 3 cut(s) 230, 642, 659
StyD4I CCNGG 2 cut(s) 197, 722
StyI CCWWGG 1 cut(s) 277
TaaI ACNGT 4 cut(s) 210, 618, 734, 854
TaiI ACGT 1 cut(s) 354
TaqI TCGA 4 cut(s) 205, 375, 786, 849
TasI AATT 5 cut(s) 37, 68, 337, 493, 707
TatI WGTACW 2 cut(s) 226, 378
TauI GCSGC 3 cut(s) 127, 413, 764
TfiI GAWTC 1 cut(s) 773
Tru1I TTAA 2 cut(s) 981, 1000
Tru9I TTAA 2 cut(s) 981, 1000
TscAI CASTG 4 cut(s) 432, 446, 520, 972
TseFI GTSAC 2 cut(s) 569, 820
TseI GCWGC 6 cut(s) 17, 20, 90, 344, 403, 557
Tsp45I GTSAC 2 cut(s) 569, 820
TspDTI ATGAA 3 cut(s) 24, 901, 979
TspRI CASTG 4 cut(s) 432, 446, 520, 972
VneI GTGCAC 1 cut(s) 662
XmiI GTMKAC 1 cut(s) 849
XspI CTAG 3 cut(s) 230, 642, 659
ZraI GACGTC 1 cut(s) 352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.