RchiOBHm_Chr1g0376631

Carboxylesterase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000860
Physical Location & Seq
Reverse (-)
63841948 .. 63842729
782 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60025

Sequence Viewer

Length: 369 bp
ATGTCAAATGAAAGGGCAGCAGCGGATTCCGATCCCAACTCCGGCGTTGATCCTTACCAGCGCCTCCAGATAGCACGCAATCCCGACGGCAGCATCACGCGCTTGTTCAAATGCCCAGACGCCCCGCCCTCATCTGATCCCAAGCTTCCCACTCCAGTTCTCACCAAAGACATCCCCATCAACCAATCAAATAACACCTGGCTTCGACTGTTCCTCCCCCGCCATGTACTGGACCAAATCTCACCAACTACCAAGCTCCCTCTCGTCGTTTATTACCATGGTGGAGGACTGGAGGCTTCATATTACTTAGGGCAGCCTCAACCATTTTCCATGATTTCTGTTTCAACTTTTCAGCCGGCGTCCCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

122

Amino Acids

13.42

Weight (kDa)

6.71

Isoelectric Point (pI)

52.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 229
AccII CGCG 1 cut(s) 100
AciI CCGC 3 cut(s) 23, 125, 220
AclWI GGATC 3 cut(s) 26, 44, 131
AcyI GRCGYC 2 cut(s) 120, 359
AfaI GTAC 1 cut(s) 228
AfiI CCNNNNNNNGG 2 cut(s) 41, 229
AgsI TTSAA 2 cut(s) 109, 345
AjnI CCWGG 1 cut(s) 197
AluBI AGCT 2 cut(s) 145, 256
AluI AGCT 2 cut(s) 145, 256
AlwI GGATC 3 cut(s) 26, 44, 131
ApeKI GCWGC 4 cut(s) 17, 20, 90, 313
AspLEI GCGC 2 cut(s) 63, 102
AspS9I GGNCC 1 cut(s) 232
AsuHPI GGTGA 2 cut(s) 154, 234
AvaII GGWCC 1 cut(s) 232
BbvI GCAGC 4 cut(s) 29, 32, 102, 325
BccI CCATC 1 cut(s) 185
BceAI ACGGC 1 cut(s) 103
BciT130I CCWGG 1 cut(s) 199
BfoI RGCGCY 1 cut(s) 64
BisI GCNGC 4 cut(s) 18, 21, 91, 314
BlsI GCNGC 4 cut(s) 19, 22, 92, 315
Bme1390I CCNGG 1 cut(s) 199
Bme18I GGWCC 1 cut(s) 232
BmgT120I GGNCC 1 cut(s) 232
BmrFI CCNGG 1 cut(s) 199
BmsI GCATC 1 cut(s) 102
BpmI CTGGAG 3 cut(s) 50, 138, 311
BsaBI GATNNNNATC 1 cut(s) 30
BsaHI GRCGYC 2 cut(s) 120, 359
BsaJI CCNNGG 1 cut(s) 277
BsaXI ACNNNNNCTCC 2 cut(s) 198, 228
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 229
Bse118I RCCGGY 1 cut(s) 355
Bse1I ACTGG 3 cut(s) 155, 234, 294
Bse8I GATNNNNATC 1 cut(s) 30
BseBI CCWGG 1 cut(s) 199
BseDI CCNNGG 1 cut(s) 277
BseGI GGATG 1 cut(s) 171
BseJI GATNNNNATC 1 cut(s) 30
BseLI CCNNNNNNNGG 2 cut(s) 41, 229
BseNI ACTGG 3 cut(s) 155, 234, 294
BseXI GCAGC 4 cut(s) 29, 32, 102, 325
Bsh1236I CGCG 1 cut(s) 100
BsiSI CCGG 2 cut(s) 42, 356
BslFI GGGAC 1 cut(s) 346
BslI CCNNNNNNNGG 2 cut(s) 41, 229
BsmFI GGGAC 1 cut(s) 346
Bsp143I GATC 3 cut(s) 31, 49, 136
Bsp19I CCATGG 1 cut(s) 277
BspACI CCGC 3 cut(s) 23, 125, 220
BspFNI CGCG 1 cut(s) 100
BspPI GGATC 3 cut(s) 26, 44, 131
BsrFI RCCGGY 1 cut(s) 355
BsrI ACTGG 3 cut(s) 155, 234, 294
BssAI RCCGGY 1 cut(s) 355
BssECI CCNNGG 1 cut(s) 277
BssMI GATC 3 cut(s) 31, 49, 136
BssNI GRCGYC 2 cut(s) 120, 359
BssT1I CCWWGG 1 cut(s) 277
Bst2UI CCWGG 1 cut(s) 199
Bst4CI ACNGT 1 cut(s) 210
BstACI GRCGYC 2 cut(s) 120, 359
BstC8I GCNNGC 2 cut(s) 76, 357
BstDEI CTNAG 1 cut(s) 307
BstDSI CCRYGG 1 cut(s) 277
BstF5I GGATG 1 cut(s) 171
BstFNI CGCG 1 cut(s) 100
BstH2I RGCGCY 1 cut(s) 64
BstHHI GCGC 2 cut(s) 63, 102
BstKTI GATC 3 cut(s) 34, 52, 139
BstMBI GATC 3 cut(s) 31, 49, 136
BstMWI GCNNNNNNNGC 1 cut(s) 99
BstNI CCWGG 1 cut(s) 199
BstSCI CCNGG 1 cut(s) 197
BstUI CGCG 1 cut(s) 100
BstV1I GCAGC 4 cut(s) 29, 32, 102, 325
BtgI CCRYGG 1 cut(s) 277
BtsCI GGATG 1 cut(s) 171
Cac8I GCNNGC 2 cut(s) 76, 357
CfoI GCGC 2 cut(s) 63, 102
Cfr10I RCCGGY 1 cut(s) 355
Cfr13I GGNCC 1 cut(s) 232
CseI GACGC 2 cut(s) 128, 348
Csp6I GTAC 1 cut(s) 227
CviAII CATG 3 cut(s) 224, 278, 331
CviJI RGCY 6 cut(s) 145, 202, 256, 296, 316, 355
CviKI_1 RGCY 6 cut(s) 145, 202, 256, 296, 316, 355
CviQI GTAC 1 cut(s) 227
DdeI CTNAG 1 cut(s) 307
DpnI GATC 3 cut(s) 33, 51, 138
DpnII GATC 3 cut(s) 31, 49, 136
Eco130I CCWWGG 1 cut(s) 277
Eco47I GGWCC 1 cut(s) 232
EcoRII CCWGG 1 cut(s) 197
EcoT14I CCWWGG 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 277
FaeI CATG 3 cut(s) 227, 281, 334
FaiI YATR 4 cut(s) 225, 279, 301, 332
FaqI GGGAC 1 cut(s) 346
FatI CATG 3 cut(s) 223, 277, 330
FauI CCCGC 2 cut(s) 132, 227
Fnu4HI GCNGC 4 cut(s) 18, 21, 91, 314
FokI GGATG 1 cut(s) 158
Fsp4HI GCNGC 4 cut(s) 18, 21, 91, 314
GlaI GCGC 2 cut(s) 62, 101
GluI GCNGC 4 cut(s) 18, 21, 91, 314
GsuI CTGGAG 3 cut(s) 50, 138, 311
HaeII RGCGCY 1 cut(s) 64
HapII CCGG 2 cut(s) 42, 356
HgaI GACGC 2 cut(s) 128, 348
HhaI GCGC 2 cut(s) 63, 102
Hin1I GRCGYC 2 cut(s) 120, 359
Hin1II CATG 3 cut(s) 227, 281, 334
Hin6I GCGC 2 cut(s) 61, 100
HinP1I GCGC 2 cut(s) 61, 100
HindIII AAGCTT 1 cut(s) 143
HinfI GANTC 1 cut(s) 26
HpaII CCGG 2 cut(s) 42, 356
HphI GGTGA 2 cut(s) 154, 234
Hpy188I TCNGA 2 cut(s) 31, 136
Hpy188III TCNNGA 2 cut(s) 67, 83
Hpy99I CGWCG 2 cut(s) 89, 269
HpyCH4III ACNGT 1 cut(s) 210
HpyF10VI GCNNNNNNNGC 1 cut(s) 99
HpyF3I CTNAG 1 cut(s) 307
Hsp92I GRCGYC 2 cut(s) 120, 359
Hsp92II CATG 3 cut(s) 227, 281, 334
HspAI GCGC 2 cut(s) 61, 100
KroI GCCGGC 1 cut(s) 355
KroNI GCCGGC 1 cut(s) 357
Kzo9I GATC 3 cut(s) 31, 49, 136
LmnI GCTCC 1 cut(s) 261
LpnPI CCDG 9 cut(s) 55, 71, 80, 129, 168, 184, 211, 215, 275
Lsp1109I GCAGC 4 cut(s) 29, 32, 102, 325
LweI GCATC 1 cut(s) 102
MalI GATC 3 cut(s) 33, 51, 138
MboI GATC 3 cut(s) 31, 49, 136
MnlI CCTC 7 cut(s) 74, 139, 224, 270, 278, 286, 327
MroNI GCCGGC 1 cut(s) 355
MspA1I CMGCKG 1 cut(s) 23
MspI CCGG 2 cut(s) 42, 356
MspR9I CCNGG 1 cut(s) 199
MvaI CCWGG 1 cut(s) 199
MvnI CGCG 1 cut(s) 100
MwoI GCNNNNNNNGC 1 cut(s) 99
NaeI GCCGGC 1 cut(s) 357
NcoI CCATGG 1 cut(s) 277
NdeII GATC 3 cut(s) 31, 49, 136
NgoMIV GCCGGC 1 cut(s) 355
NlaIII CATG 3 cut(s) 227, 281, 334
PdiI GCCGGC 1 cut(s) 357
PfeI GAWTC 1 cut(s) 26
PflMI CCANNNNNTGG 1 cut(s) 229
PkrI GCNGC 4 cut(s) 19, 22, 92, 315
Psp6I CCWGG 1 cut(s) 197
PspGI CCWGG 1 cut(s) 197
PspPI GGNCC 1 cut(s) 232
RsaI GTAC 1 cut(s) 228
RsaNI GTAC 1 cut(s) 227
SatI GCNGC 4 cut(s) 18, 21, 91, 314
Sau3AI GATC 3 cut(s) 31, 49, 136
Sau96I GGNCC 1 cut(s) 232
ScrFI CCNGG 1 cut(s) 199
SetI ASST 3 cut(s) 147, 200, 258
SfaNI GCATC 1 cut(s) 102
SinI GGWCC 1 cut(s) 232
SsiI CCGC 3 cut(s) 23, 125, 220
StyD4I CCNGG 1 cut(s) 197
StyI CCWWGG 1 cut(s) 277
TaaI ACNGT 1 cut(s) 210
TaqI TCGA 1 cut(s) 205
TatI WGTACW 1 cut(s) 226
TfiI GAWTC 1 cut(s) 26
TseI GCWGC 4 cut(s) 17, 20, 90, 313
TspDTI ATGAA 2 cut(s) 24, 288
Van91I CCANNNNNTGG 1 cut(s) 229
VpaK11BI GGWCC 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.