Rh4DG244600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
45589835 .. 45594276
4442 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG244600.1

Sequence Viewer

Length: 318 bp
ATGCTGGCACAATCCAAGATAGATGGTGAGTTTATTTGGGCTGCTGCTATTCGCATTCAAGCATCCAAGGTCAGCAACAAATTCAAGTCAAGAATTAAGGCATCCAAGGTCAACAACAAATTCAAGTCAAGAATTAAGGTAGGAGAAGAAAACTTGACATCCAAGCACCACAGCAAATGTGACAATAAAATTAGGCAGCCTTTTCCCATACTTTTGAATTTTCAATGCAATACTATGGTGGCGGCCTCCATCTATATTTTTTTTTTTTTTTGGACTGATGCTAAACTAATGGAAGATTTAAATGATGTTTATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

105

Amino Acids

12.21

Weight (kDa)

9.74

Isoelectric Point (pI)

22.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 242
AcsI RAATTY 3 cut(s) 80, 119, 217
AgsI TTSAA 5 cut(s) 59, 85, 124, 217, 224
AoxI GGCC 1 cut(s) 243
ApeKI GCWGC 3 cut(s) 41, 44, 196
ApoI RAATTY 3 cut(s) 80, 119, 217
AsuHPI GGTGA 1 cut(s) 38
BbvI GCAGC 3 cut(s) 28, 31, 208
BccI CCATC 2 cut(s) 17, 257
BisI GCNGC 4 cut(s) 42, 45, 197, 243
BlsI GCNGC 4 cut(s) 43, 46, 198, 244
BmsI GCATC 3 cut(s) 71, 110, 268
BsaJI CCNNGG 2 cut(s) 66, 105
BseDI CCNNGG 2 cut(s) 66, 105
BseGI GGATG 3 cut(s) 62, 101, 158
BseXI GCAGC 3 cut(s) 28, 31, 208
BshFI GGCC 1 cut(s) 245
BsmI GAATGC 1 cut(s) 54
BsnI GGCC 1 cut(s) 245
BspACI CCGC 1 cut(s) 242
BspANI GGCC 1 cut(s) 245
BssECI CCNNGG 2 cut(s) 66, 105
BssT1I CCWWGG 2 cut(s) 66, 105
BstC8I GCNNGC 1 cut(s) 6
BstF5I GGATG 3 cut(s) 62, 101, 158
BstV1I GCAGC 3 cut(s) 28, 31, 208
BsuRI GGCC 1 cut(s) 245
BtsCI GGATG 3 cut(s) 62, 101, 158
Cac8I GCNNGC 1 cut(s) 6
CviJI RGCY 3 cut(s) 41, 199, 245
CviKI_1 RGCY 3 cut(s) 41, 199, 245
DraI TTTAAA 1 cut(s) 300
Eco130I CCWWGG 2 cut(s) 66, 105
EcoT14I CCWWGG 2 cut(s) 66, 105
ErhI CCWWGG 2 cut(s) 66, 105
FaiI YATR 3 cut(s) 209, 236, 255
Fnu4HI GCNGC 4 cut(s) 42, 45, 197, 243
FokI GGATG 3 cut(s) 49, 88, 145
Fsp4HI GCNGC 4 cut(s) 42, 45, 197, 243
GluI GCNGC 4 cut(s) 42, 45, 197, 243
HaeIII GGCC 1 cut(s) 245
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HphI GGTGA 1 cut(s) 38
Hpy166II GTNNAC 1 cut(s) 112
Hpy188I TCNGA 1 cut(s) 317
Hpy188III TCNNGA 2 cut(s) 90, 129
Hpy8I GTNNAC 1 cut(s) 112
HpyCH4V TGCA 1 cut(s) 228
Lsp1109I GCAGC 3 cut(s) 28, 31, 208
LweI GCATC 3 cut(s) 71, 110, 268
MaeIII GTNAC 1 cut(s) 179
MboII GAAGA 2 cut(s) 158, 305
MluCI AATT 6 cut(s) 80, 93, 119, 132, 189, 217
MnlI CCTC 1 cut(s) 256
MseI TTAA 3 cut(s) 96, 135, 299
Mva1269I GAATGC 1 cut(s) 54
NmuCI GTSAC 1 cut(s) 179
PctI GAATGC 1 cut(s) 54
PkrI GCNGC 4 cut(s) 43, 46, 198, 244
SaqAI TTAA 3 cut(s) 96, 135, 299
SatI GCNGC 4 cut(s) 42, 45, 197, 243
SetI ASST 3 cut(s) 72, 111, 141
SfaNI GCATC 3 cut(s) 71, 110, 268
SmiI ATTTAAAT 1 cut(s) 300
Sse9I AATT 6 cut(s) 80, 93, 119, 132, 189, 217
SsiI CCGC 1 cut(s) 242
StyI CCWWGG 2 cut(s) 66, 105
SwaI ATTTAAAT 1 cut(s) 300
TasI AATT 6 cut(s) 80, 93, 119, 132, 189, 217
TauI GCSGC 1 cut(s) 245
Tru1I TTAA 3 cut(s) 96, 135, 299
Tru9I TTAA 3 cut(s) 96, 135, 299
TseFI GTSAC 1 cut(s) 179
TseI GCWGC 3 cut(s) 41, 44, 196
Tsp45I GTSAC 1 cut(s) 179
XapI RAATTY 3 cut(s) 80, 119, 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.