RLG00000026592

Carboxylesterase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000860
Physical Location & Seq
Forward (+)
4103071 .. 4104069
999 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026592

Sequence Viewer

Length: 999 bp
ATGTCAAATGAAAGGTCAGCAGCGGATTCCGATCCCAACTCCAGCGTCGATCCTTACCAGCGCCTCCAGAGAGCACGCAATCCCGACGGCAGCATCACGCGCTTGTTCAAATGTCCAGACTCCCCGCCCTCATCTGATCCCAAGCTTCCGACTCCAGTTCTCACCAAAGACATCCCCATCAACCAATCAAATAACACCTGGCTTCGACTGTTCCTCCCCCGCCATGTACTGGACCAAACCTCACCAACTACCAAGCTCCCTCTCGTCGTTTATTACCATGGTGGTGGCTTCATATTACTTAGCGCAGCCTCAACCATTTTCCATGATTTCTGTTTCAACTTTGCAGCCGACGTCCCCGTGATCGTCGCATCTGTCGAGTACAGGTTGGCTCCTGAGCACCGCTTGCCGGCGGCTTATGATGATGCAGTGGAGGCGCTTCACTGGATCAAAACCTGCCAAGATGATTGGTTGAGAGACTACGCTGACCTCTCCAATTGTTTCCTTATGGGATCCAGTGCTGGGGGTAACATAGCCTACAATGCAGGACTTCGTGCGGCTGCTGAGGGCATTGACCTTCTCCAACCGTTGAAGATCAGAGGGCTGATATTGGTGCAACCGTACTTCGGGGGGAATCGAAGGACTAGTTCAGAGTTGAGGTTGGTAAACAACCCTGTTTTGGCGCCAAGTGTCTGTGATCTCATGTGGGACTTGTCGTTGCCTATCGGGGCTGACCGTGATCACGAGTATTGCAATCCAATGGTGGGTGGCGATTCTAATGGCTTTGATCAAGTGAAAACACTTGGGTGGAAAGTTTTGGTGAGTGGCTCTGATGGAGACCCACTGATCGATCGTCAGATTGAGCTGGTGAAGATGTTGGAGGGGAAGGGTGTACATGTGGTGAGTCAGTTTATTGAAGGAGGTTATCATGGGGCTCAAGATGTTGAACCCTCCAAAGCCAAGGATGTGTTTGTGCTTGTTAAGCATTTCGTATTTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

333

Amino Acids

36.56

Weight (kDa)

5.45

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BD-FAE PF20434 83 - 190 7.2e-13 BD-FAE
Abhydrolase_3 PF07859 89 - 311 4e-52 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 354
Acc36I ACCTGC 1 cut(s) 461
AccB1I GGYRCC 1 cut(s) 679
AccB7I CCANNNNNTGG 1 cut(s) 229
AccII CGCG 1 cut(s) 100
AciI CCGC 6 cut(s) 23, 125, 220, 400, 410, 554
AclWI GGATC 6 cut(s) 26, 44, 131, 452, 504, 517
AcyI GRCGYC 2 cut(s) 351, 680
AfaI GTAC 4 cut(s) 228, 380, 620, 891
AfiI CCNNNNNNNGG 6 cut(s) 229, 406, 519, 623, 676, 761
AflIII ACRYGT 1 cut(s) 892
AgsI TTSAA 5 cut(s) 109, 337, 589, 914, 944
AhlI ACTAGT 1 cut(s) 641
AjnI CCWGG 1 cut(s) 197
AleI CACNNNNGTG 1 cut(s) 802
AluBI AGCT 3 cut(s) 145, 256, 862
AluI AGCT 3 cut(s) 145, 256, 862
Alw21I GWGCWC 2 cut(s) 76, 399
Alw26I GTCTC 2 cut(s) 468, 828
AlwI GGATC 6 cut(s) 26, 44, 131, 452, 504, 517
ApeKI GCWGC 5 cut(s) 20, 90, 305, 344, 557
ArsI GACNNNNNNTTYG 1 cut(s) 31
AspLEI GCGC 5 cut(s) 63, 102, 305, 436, 682
AspS9I GGNCC 1 cut(s) 232
AsuHPI GGTGA 5 cut(s) 154, 234, 829, 877, 910
AvaII GGWCC 1 cut(s) 232
BamHI GGATCC 1 cut(s) 509
BanI GGYRCC 1 cut(s) 679
BanII GRGCYC 1 cut(s) 934
BauI CACGAG 1 cut(s) 740
Bbv12I GWGCWC 2 cut(s) 76, 399
BbvCI CCTCAGC 1 cut(s) 561
BbvI GCAGC 5 cut(s) 32, 102, 317, 356, 544
BccI CCATC 2 cut(s) 185, 824
BceAI ACGGC 1 cut(s) 103
BciT130I CCWGG 1 cut(s) 199
BclI TGATCA 2 cut(s) 736, 784
BcoDI GTCTC 2 cut(s) 468, 828
BcuI ACTAGT 1 cut(s) 641
BfaI CTAG 1 cut(s) 642
BfoI RGCGCY 3 cut(s) 64, 437, 683
BfuAI ACCTGC 1 cut(s) 461
BisI GCNGC 7 cut(s) 21, 91, 306, 345, 411, 555, 558
BlsI GCNGC 7 cut(s) 22, 92, 307, 346, 412, 556, 559
Bme1390I CCNGG 1 cut(s) 199
Bme18I GGWCC 1 cut(s) 232
BmgT120I GGNCC 1 cut(s) 232
BmiI GGNNCC 3 cut(s) 390, 511, 681
BmrFI CCNGG 1 cut(s) 199
BmsI GCATC 3 cut(s) 102, 377, 412
BpmI CTGGAG 3 cut(s) 25, 50, 138
Bpu10I CCTNAGC 2 cut(s) 393, 561
BpuEI CTTGAG 1 cut(s) 918
Bsa29I ATCGAT 1 cut(s) 846
BsaBI GATNNNNATC 1 cut(s) 30
BsaHI GRCGYC 2 cut(s) 351, 680
BsaI GGTCTC 1 cut(s) 828
BsaJI CCNNGG 2 cut(s) 277, 957
BsaXI ACNNNNNCTCC 2 cut(s) 198, 228
Bsc4I CCNNNNNNNGG 6 cut(s) 229, 406, 519, 623, 676, 761
Bse118I RCCGGY 1 cut(s) 406
Bse1I ACTGG 4 cut(s) 155, 234, 446, 513
Bse8I GATNNNNATC 1 cut(s) 30
BseBI CCWGG 1 cut(s) 199
BseCI ATCGAT 1 cut(s) 846
BseDI CCNNGG 2 cut(s) 277, 957
BseGI GGATG 2 cut(s) 171, 967
BseJI GATNNNNATC 1 cut(s) 30
BseLI CCNNNNNNNGG 6 cut(s) 229, 406, 519, 623, 676, 761
BseMII CTCAG 2 cut(s) 384, 552
BseNI ACTGG 4 cut(s) 155, 234, 446, 513
BseXI GCAGC 5 cut(s) 32, 102, 317, 356, 544
BseYI CCCAGC 1 cut(s) 518
Bsh1236I CGCG 1 cut(s) 100
Bsh1285I CGRYCG 1 cut(s) 850
BshNI GGYRCC 1 cut(s) 679
BshVI ATCGAT 1 cut(s) 846
BsiEI CGRYCG 1 cut(s) 850
BsiHKAI GWGCWC 2 cut(s) 76, 399
BsiSI CCGG 1 cut(s) 407
BslFI GGGAC 2 cut(s) 338, 719
BslI CCNNNNNNNGG 6 cut(s) 229, 406, 519, 623, 676, 761
BsmAI GTCTC 2 cut(s) 468, 828
BsmFI GGGAC 2 cut(s) 338, 719
Bso31I GGTCTC 1 cut(s) 828
Bsp1286I GDGCHC 3 cut(s) 76, 399, 934
Bsp1407I TGTACA 1 cut(s) 889
Bsp19I CCATGG 1 cut(s) 277
BspACI CCGC 6 cut(s) 23, 125, 220, 400, 410, 554
BspCNI CTCAG 2 cut(s) 385, 553
BspDI ATCGAT 1 cut(s) 846
BspFNI CGCG 1 cut(s) 100
BspLI GGNNCC 3 cut(s) 390, 511, 681
BspMI ACCTGC 1 cut(s) 461
BspPI GGATC 6 cut(s) 26, 44, 131, 452, 504, 517
BspT107I GGYRCC 1 cut(s) 679
BspTNI GGTCTC 1 cut(s) 828
BsrFI RCCGGY 1 cut(s) 406
BsrGI TGTACA 1 cut(s) 889
BsrI ACTGG 4 cut(s) 155, 234, 446, 513
BssAI RCCGGY 1 cut(s) 406
BssECI CCNNGG 2 cut(s) 277, 957
BssNI GRCGYC 2 cut(s) 351, 680
BssSI CACGAG 1 cut(s) 740
BssT1I CCWWGG 2 cut(s) 277, 957
Bst2BI CACGAG 1 cut(s) 740
Bst2UI CCWGG 1 cut(s) 199
Bst4CI ACNGT 4 cut(s) 210, 585, 618, 734
BstACI GRCGYC 2 cut(s) 351, 680
BstAPI GCANNNNNTGC 1 cut(s) 403
BstAUI TGTACA 1 cut(s) 889
BstC8I GCNNGC 3 cut(s) 76, 404, 408
BstDEI CTNAG 3 cut(s) 299, 393, 561
BstDSI CCRYGG 1 cut(s) 277
BstF5I GGATG 2 cut(s) 171, 967
BstFNI CGCG 1 cut(s) 100
BstH2I RGCGCY 3 cut(s) 64, 437, 683
BstHHI GCGC 5 cut(s) 63, 102, 305, 436, 682
BstMAI GTCTC 2 cut(s) 468, 828
BstMCI CGRYCG 1 cut(s) 850
BstMWI GCNNNNNNNGC 5 cut(s) 99, 403, 431, 539, 979
BstNI CCWGG 1 cut(s) 199
BstNSI RCATGY 1 cut(s) 896
BstSCI CCNGG 1 cut(s) 197
BstUI CGCG 1 cut(s) 100
BstV1I GCAGC 5 cut(s) 32, 102, 317, 356, 544
BstX2I RGATCY 1 cut(s) 509
BstXI CCANNNNNNTGG 1 cut(s) 284
BstYI RGATCY 1 cut(s) 509
Bsu15I ATCGAT 1 cut(s) 846
BsuTUI ATCGAT 1 cut(s) 846
BtgI CCRYGG 1 cut(s) 277
BtsCI GGATG 2 cut(s) 171, 967
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 4 cut(s) 432, 439, 520, 839
BveI ACCTGC 1 cut(s) 461
Cac8I GCNNGC 3 cut(s) 76, 404, 408
CfoI GCGC 5 cut(s) 63, 102, 305, 436, 682
Cfr10I RCCGGY 1 cut(s) 406
Cfr13I GGNCC 1 cut(s) 232
ClaI ATCGAT 1 cut(s) 846
CseI GACGC 1 cut(s) 34
Csp6I GTAC 4 cut(s) 227, 379, 619, 890
CviAII CATG 6 cut(s) 224, 278, 323, 700, 893, 926
CviQI GTAC 4 cut(s) 227, 379, 619, 890
DdeI CTNAG 3 cut(s) 299, 393, 561
DinI GGCGCC 1 cut(s) 681
Eco130I CCWWGG 2 cut(s) 277, 957
Eco24I GRGCYC 1 cut(s) 934
Eco31I GGTCTC 1 cut(s) 828
Eco47I GGWCC 1 cut(s) 232
EcoRII CCWGG 1 cut(s) 197
EcoT14I CCWWGG 2 cut(s) 277, 957
EcoT38I GRGCYC 1 cut(s) 934
EgeI GGCGCC 1 cut(s) 681
EheI GGCGCC 1 cut(s) 681
ErhI CCWWGG 2 cut(s) 277, 957
FaeI CATG 6 cut(s) 227, 281, 326, 703, 896, 929
FaqI GGGAC 2 cut(s) 338, 719
FatI CATG 6 cut(s) 223, 277, 322, 699, 892, 925
FauI CCCGC 2 cut(s) 132, 227
FbaI TGATCA 2 cut(s) 736, 784
Fnu4HI GCNGC 7 cut(s) 21, 91, 306, 345, 411, 555, 558
FokI GGATG 2 cut(s) 158, 974
FriOI GRGCYC 1 cut(s) 934
Fsp4HI GCNGC 7 cut(s) 21, 91, 306, 345, 411, 555, 558
FspBI CTAG 1 cut(s) 642
GlaI GCGC 5 cut(s) 62, 101, 304, 435, 681
GluI GCNGC 7 cut(s) 21, 91, 306, 345, 411, 555, 558
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 3 cut(s) 25, 50, 138
HaeII RGCGCY 3 cut(s) 64, 437, 683
HapII CCGG 1 cut(s) 407
HgaI GACGC 1 cut(s) 34
HhaI GCGC 5 cut(s) 63, 102, 305, 436, 682
Hin1I GRCGYC 2 cut(s) 351, 680
Hin1II CATG 6 cut(s) 227, 281, 326, 703, 896, 929
Hin6I GCGC 5 cut(s) 61, 100, 303, 434, 680
HinP1I GCGC 5 cut(s) 61, 100, 303, 434, 680
HindIII AAGCTT 1 cut(s) 143
HinfI GANTC 6 cut(s) 26, 119, 151, 631, 770, 901
HpaII CCGG 1 cut(s) 407
HphI GGTGA 5 cut(s) 154, 234, 829, 877, 910
Hpy166II GTNNAC 2 cut(s) 664, 890
Hpy188I TCNGA 7 cut(s) 31, 136, 150, 596, 649, 829, 855
Hpy188III TCNNGA 6 cut(s) 67, 83, 116, 392, 740, 935
Hpy8I GTNNAC 2 cut(s) 664, 890
Hpy99I CGWCG 5 cut(s) 50, 89, 269, 353, 368
HpyAV CCTTC 4 cut(s) 584, 630, 877, 908
HpyCH4III ACNGT 4 cut(s) 210, 585, 618, 734
HpyCH4IV ACGT 1 cut(s) 351
HpyCH4V TGCA 5 cut(s) 344, 425, 542, 613, 750
HpyF10VI GCNNNNNNNGC 5 cut(s) 99, 403, 431, 539, 979
HpyF3I CTNAG 3 cut(s) 299, 393, 561
HpySE526I ACGT 1 cut(s) 351
Hsp92I GRCGYC 2 cut(s) 351, 680
Hsp92II CATG 6 cut(s) 227, 281, 326, 703, 896, 929
HspAI GCGC 5 cut(s) 61, 100, 303, 434, 680
KasI GGCGCC 1 cut(s) 679
KroI GCCGGC 1 cut(s) 406
KroNI GCCGGC 1 cut(s) 408
Ksp22I TGATCA 2 cut(s) 736, 784
LmnI GCTCC 2 cut(s) 261, 394
Lsp1109I GCAGC 5 cut(s) 32, 102, 317, 356, 544
LweI GCATC 3 cut(s) 102, 377, 412
MaeI CTAG 1 cut(s) 642
MaeII ACGT 1 cut(s) 351
MaeIII GTNAC 1 cut(s) 524
MboII GAAGA 2 cut(s) 601, 880
MfeI CAATTG 1 cut(s) 493
MflI RGATCY 1 cut(s) 509
MhlI GDGCHC 3 cut(s) 76, 399, 934
MluCI AATT 1 cut(s) 493
Mly113I GGCGCC 1 cut(s) 680
MlyI GAGTC 3 cut(s) 113, 145, 910
MmeI TCCRAC 3 cut(s) 173, 604, 855
MroNI GCCGGC 1 cut(s) 406
MseI TTAA 2 cut(s) 978, 997
MslI CAYNNNNRTG 2 cut(s) 282, 802
MspA1I CMGCKG 1 cut(s) 23
MspI CCGG 1 cut(s) 407
MspR9I CCNGG 1 cut(s) 199
MunI CAATTG 1 cut(s) 493
MvaI CCWGG 1 cut(s) 199
MvnI CGCG 1 cut(s) 100
MwoI GCNNNNNNNGC 5 cut(s) 99, 403, 431, 539, 979
NaeI GCCGGC 1 cut(s) 408
NarI GGCGCC 1 cut(s) 680
NcoI CCATGG 1 cut(s) 277
NgoMIV GCCGGC 1 cut(s) 406
NlaIII CATG 6 cut(s) 227, 281, 326, 703, 896, 929
NlaIV GGNNCC 3 cut(s) 390, 511, 681
NspI RCATGY 1 cut(s) 896
OliI CACNNNNGTG 1 cut(s) 802
PciI ACATGT 1 cut(s) 892
PcsI WCGNNNNNNNCGW 1 cut(s) 372
PdiI GCCGGC 1 cut(s) 408
PfeI GAWTC 3 cut(s) 26, 631, 770
PflMI CCANNNNNTGG 1 cut(s) 229
PkrI GCNGC 7 cut(s) 22, 92, 307, 346, 412, 556, 559
Ple19I CGATCG 1 cut(s) 850
PleI GAGTC 3 cut(s) 113, 145, 909
PluTI GGCGCC 1 cut(s) 683
PpsI GAGTC 3 cut(s) 113, 145, 909
PscI ACATGT 1 cut(s) 892
Psp6I CCWGG 1 cut(s) 197
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 1 cut(s) 197
PspN4I GGNNCC 3 cut(s) 390, 511, 681
PspPI GGNCC 1 cut(s) 232
PsuI RGATCY 1 cut(s) 509
PvuI CGATCG 1 cut(s) 850
RsaI GTAC 4 cut(s) 228, 380, 620, 891
RsaNI GTAC 4 cut(s) 227, 379, 619, 890
RseI CAYNNNNRTG 2 cut(s) 282, 802
SaqAI TTAA 2 cut(s) 978, 997
SatI GCNGC 7 cut(s) 21, 91, 306, 345, 411, 555, 558
Sau96I GGNCC 1 cut(s) 232
SchI GAGTC 3 cut(s) 113, 145, 910
ScrFI CCNGG 1 cut(s) 199
SduI GDGCHC 3 cut(s) 76, 399, 934
SfaNI GCATC 3 cut(s) 102, 377, 412
SfoI GGCGCC 1 cut(s) 681
SinI GGWCC 1 cut(s) 232
SmiMI CAYNNNNRTG 2 cut(s) 282, 802
SmlI CTYRAG 1 cut(s) 933
SmoI CTYRAG 1 cut(s) 933
SpeI ACTAGT 1 cut(s) 641
Sse9I AATT 1 cut(s) 493
SsiI CCGC 6 cut(s) 23, 125, 220, 400, 410, 554
SspDI GGCGCC 1 cut(s) 679
SspMI CTAG 1 cut(s) 642
StyD4I CCNGG 1 cut(s) 197
StyI CCWWGG 2 cut(s) 277, 957
TaaI ACNGT 4 cut(s) 210, 585, 618, 734
TaiI ACGT 1 cut(s) 354
TaqI TCGA 5 cut(s) 48, 205, 375, 634, 846
TasI AATT 1 cut(s) 493
TatI WGTACW 3 cut(s) 226, 378, 889
TauI GCSGC 2 cut(s) 413, 557
TfiI GAWTC 3 cut(s) 26, 631, 770
Tru1I TTAA 2 cut(s) 978, 997
Tru9I TTAA 2 cut(s) 978, 997
TscAI CASTG 4 cut(s) 432, 446, 520, 846
TseI GCWGC 5 cut(s) 20, 90, 305, 344, 557
TspDTI ATGAA 2 cut(s) 24, 280
TspRI CASTG 4 cut(s) 432, 446, 520, 846
Van91I CCANNNNNTGG 1 cut(s) 229
VpaK11BI GGWCC 1 cut(s) 232
XceI RCATGY 1 cut(s) 896
XspI CTAG 1 cut(s) 642
ZraI GACGTC 1 cut(s) 352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.