RLG00000026587

Carboxylesterase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000860
Physical Location & Seq
Forward (+)
4064660 .. 4065636
977 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026587

Sequence Viewer

Length: 900 bp
ATGTCAAATGAAAGGTCAGCAGCGGATTCCGATCCCAACTCCAGCGTTGATCCTTACCAGCGCCTCCAGATAGCAAGCAATCCCGACGGCAGCATCACGCGCTTGTTCAAATGTCCAGACGCCCCGCCCTCATCTGATCCCAAACTTCCCACTCCAGTTCTCTCCAAAGACATCCCGATCAACCAATCAAACAACACCTGGCTTCGACGTTCCTCCCCCGCCATCGCAGCCTCAACCATTTTCCATGATTTCTGTTTCAACTTTGCAGCCGACGTCCCCGTGATCGTCGCATCTGTCGAGTACAGGTTGGCTCCTGAGCACCGGATGCTAGCGGCTTATGATGATGCAGTGGAGGCGCTTCACTGGATCAAAACCTGCCAAGATGATTGGTTGAGAGACTACGCTGACCTATCCAATTGTTTCCTTGTGGGATCCAGTGCTGAGGGTAACATAGCCTACAATGCAGGACTTCGTGCGACTGCTGAGTGCATTGACCTTCTCCACCGGTTGACGATTAGAGGGCTGATATTGGTGCAACCGTTCCTCGGGGGGAATCGAAGGACTAGTTCAGAGTTGAGGTTGGTGAACCACCCTGTTTTGGCGCTAAGTGTCTGTGATCTCATGTGGGACTTGTCGTTACCCATCGGGGCTGACCGTGATCACGAGTATTGCAATCCAATGGCGGGTGGCGATTCTAATCGCTTTGATCAAGTGAAAGCACTTGGGTGGAAAGTTTTGGTGAGTGGCTCTGATGGAGACCCGCTGATTGATCGTCAGATTGAGCTGGTGAAGATGTTGGAGGCAAAAGGTGTACAAGTGGTGAGTCAGTTTATCGAAGGAGGTTATCATGGGGCTCAAGATGTTAAACCCTCCAAAGCCAATTCTGTTTGTGCTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

300

Amino Acids

32.71

Weight (kDa)

5.13

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 82 - 285 3.5e-40 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 276
Acc36I ACCTGC 1 cut(s) 383
AccII CGCG 1 cut(s) 100
AciI CCGC 6 cut(s) 23, 125, 219, 332, 683, 761
AclWI GGATC 6 cut(s) 26, 44, 131, 374, 426, 439
AcyI GRCGYC 2 cut(s) 120, 273
AfaI GTAC 2 cut(s) 302, 813
AfiI CCNNNNNNNGG 3 cut(s) 545, 598, 683
AgeI ACCGGT 1 cut(s) 504
AgsI TTSAA 2 cut(s) 109, 259
AhlI ACTAGT 1 cut(s) 563
AjnI CCWGG 1 cut(s) 197
AleI CACNNNNGTG 1 cut(s) 724
AluBI AGCT 1 cut(s) 784
AluI AGCT 1 cut(s) 784
Alw21I GWGCWC 1 cut(s) 321
Alw26I GTCTC 2 cut(s) 390, 750
AlwI GGATC 6 cut(s) 26, 44, 131, 374, 426, 439
Ama87I CYCGRG 1 cut(s) 545
ApeKI GCWGC 4 cut(s) 20, 90, 227, 266
ArsI GACNNNNNNTTYG 1 cut(s) 31
AsiGI ACCGGT 1 cut(s) 504
AspLEI GCGC 4 cut(s) 63, 102, 358, 604
AsuHPI GGTGA 4 cut(s) 595, 751, 799, 832
AsuNHI GCTAGC 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 545
BamHI GGATCC 1 cut(s) 431
BanII GRGCYC 1 cut(s) 856
BauI CACGAG 1 cut(s) 662
Bbv12I GWGCWC 1 cut(s) 321
BbvCI CCTCAGC 1 cut(s) 441
BbvI GCAGC 4 cut(s) 32, 102, 239, 278
BccI CCATC 3 cut(s) 230, 650, 746
BceAI ACGGC 1 cut(s) 103
BciT130I CCWGG 1 cut(s) 199
BclI TGATCA 2 cut(s) 658, 706
BcoDI GTCTC 2 cut(s) 390, 750
BcuI ACTAGT 1 cut(s) 563
BfaI CTAG 2 cut(s) 329, 564
BfoI RGCGCY 3 cut(s) 64, 359, 605
BfuAI ACCTGC 1 cut(s) 383
BisI GCNGC 5 cut(s) 21, 91, 228, 267, 333
BlsI GCNGC 5 cut(s) 22, 92, 229, 268, 334
Bme1390I CCNGG 1 cut(s) 199
BmeT110I CYCGRG 1 cut(s) 545
BmiI GGNNCC 2 cut(s) 312, 433
BmrFI CCNGG 1 cut(s) 199
BmsI GCATC 4 cut(s) 102, 299, 315, 334
BmtI GCTAGC 1 cut(s) 332
BpmI CTGGAG 3 cut(s) 25, 50, 138
Bpu10I CCTNAGC 2 cut(s) 315, 441
BpuEI CTTGAG 1 cut(s) 840
BsaBI GATNNNNATC 2 cut(s) 30, 696
BsaHI GRCGYC 2 cut(s) 120, 273
BsaI GGTCTC 1 cut(s) 750
BsaJI CCNNGG 1 cut(s) 544
BsaWI WCCGGW 2 cut(s) 321, 504
Bsc4I CCNNNNNNNGG 3 cut(s) 545, 598, 683
Bse118I RCCGGY 1 cut(s) 504
Bse1I ACTGG 3 cut(s) 155, 368, 435
Bse8I GATNNNNATC 2 cut(s) 30, 696
BseBI CCWGG 1 cut(s) 199
BseDI CCNNGG 1 cut(s) 544
BseGI GGATG 2 cut(s) 171, 330
BseJI GATNNNNATC 2 cut(s) 30, 696
BseLI CCNNNNNNNGG 3 cut(s) 545, 598, 683
BseMII CTCAG 3 cut(s) 306, 432, 474
BseNI ACTGG 3 cut(s) 155, 368, 435
BseXI GCAGC 4 cut(s) 32, 102, 239, 278
Bsh1236I CGCG 1 cut(s) 100
BshTI ACCGGT 1 cut(s) 504
BsiHKAI GWGCWC 1 cut(s) 321
BsiHKCI CYCGRG 1 cut(s) 545
BsiSI CCGG 2 cut(s) 322, 505
BslFI GGGAC 2 cut(s) 260, 641
BslI CCNNNNNNNGG 3 cut(s) 545, 598, 683
BsmAI GTCTC 2 cut(s) 390, 750
BsmFI GGGAC 2 cut(s) 260, 641
Bso31I GGTCTC 1 cut(s) 750
BsoBI CYCGRG 1 cut(s) 545
Bsp1286I GDGCHC 2 cut(s) 321, 856
Bsp1407I TGTACA 1 cut(s) 811
BspACI CCGC 6 cut(s) 23, 125, 219, 332, 683, 761
BspCNI CTCAG 3 cut(s) 307, 433, 475
BspFNI CGCG 1 cut(s) 100
BspLI GGNNCC 2 cut(s) 312, 433
BspMI ACCTGC 1 cut(s) 383
BspOI GCTAGC 1 cut(s) 332
BspPI GGATC 6 cut(s) 26, 44, 131, 374, 426, 439
BspTNI GGTCTC 1 cut(s) 750
BsrFI RCCGGY 1 cut(s) 504
BsrGI TGTACA 1 cut(s) 811
BsrI ACTGG 3 cut(s) 155, 368, 435
BssAI RCCGGY 1 cut(s) 504
BssECI CCNNGG 1 cut(s) 544
BssNI GRCGYC 2 cut(s) 120, 273
BssSI CACGAG 1 cut(s) 662
Bst2BI CACGAG 1 cut(s) 662
Bst2UI CCWGG 1 cut(s) 199
Bst4CI ACNGT 2 cut(s) 540, 656
BstACI GRCGYC 2 cut(s) 120, 273
BstAPI GCANNNNNTGC 1 cut(s) 325
BstAUI TGTACA 1 cut(s) 811
BstC8I GCNNGC 2 cut(s) 76, 330
BstDEI CTNAG 4 cut(s) 315, 441, 483, 605
BstF5I GGATG 2 cut(s) 171, 330
BstFNI CGCG 1 cut(s) 100
BstH2I RGCGCY 3 cut(s) 64, 359, 605
BstHHI GCGC 4 cut(s) 63, 102, 358, 604
BstMAI GTCTC 2 cut(s) 390, 750
BstMWI GCNNNNNNNGC 5 cut(s) 99, 227, 325, 353, 461
BstNI CCWGG 1 cut(s) 199
BstSCI CCNGG 1 cut(s) 197
BstUI CGCG 1 cut(s) 100
BstV1I GCAGC 4 cut(s) 32, 102, 239, 278
BstX2I RGATCY 1 cut(s) 431
BstYI RGATCY 1 cut(s) 431
BtgZI GCGATG 1 cut(s) 208
BtsCI GGATG 2 cut(s) 171, 330
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 3 cut(s) 354, 361, 442
BveI ACCTGC 1 cut(s) 383
Cac8I GCNNGC 2 cut(s) 76, 330
CfoI GCGC 4 cut(s) 63, 102, 358, 604
Cfr10I RCCGGY 1 cut(s) 504
CseI GACGC 1 cut(s) 128
Csp6I GTAC 2 cut(s) 301, 812
CspAI ACCGGT 1 cut(s) 504
CviAII CATG 3 cut(s) 245, 622, 848
CviQI GTAC 2 cut(s) 301, 812
DdeI CTNAG 4 cut(s) 315, 441, 483, 605
Eco24I GRGCYC 1 cut(s) 856
Eco31I GGTCTC 1 cut(s) 750
Eco88I CYCGRG 1 cut(s) 545
EcoRII CCWGG 1 cut(s) 197
EcoT38I GRGCYC 1 cut(s) 856
FaeI CATG 3 cut(s) 248, 625, 851
FaiI YATR 5 cut(s) 246, 339, 452, 623, 849
FaqI GGGAC 2 cut(s) 260, 641
FatI CATG 3 cut(s) 244, 621, 847
FauI CCCGC 4 cut(s) 132, 226, 676, 768
FbaI TGATCA 2 cut(s) 658, 706
Fnu4HI GCNGC 5 cut(s) 21, 91, 228, 267, 333
FokI GGATG 2 cut(s) 158, 337
FriOI GRGCYC 1 cut(s) 856
Fsp4HI GCNGC 5 cut(s) 21, 91, 228, 267, 333
FspBI CTAG 2 cut(s) 329, 564
GlaI GCGC 4 cut(s) 62, 101, 357, 603
GluI GCNGC 5 cut(s) 21, 91, 228, 267, 333
GsuI CTGGAG 3 cut(s) 25, 50, 138
HaeII RGCGCY 3 cut(s) 64, 359, 605
HapII CCGG 2 cut(s) 322, 505
HgaI GACGC 1 cut(s) 128
HhaI GCGC 4 cut(s) 63, 102, 358, 604
Hin1I GRCGYC 2 cut(s) 120, 273
Hin1II CATG 3 cut(s) 248, 625, 851
Hin6I GCGC 4 cut(s) 61, 100, 356, 602
HinP1I GCGC 4 cut(s) 61, 100, 356, 602
HincII GTYRAC 1 cut(s) 510
HindII GTYRAC 1 cut(s) 510
HinfI GANTC 4 cut(s) 26, 553, 692, 823
HpaII CCGG 2 cut(s) 322, 505
HphI GGTGA 4 cut(s) 595, 751, 799, 832
Hpy166II GTNNAC 3 cut(s) 510, 586, 812
Hpy188I TCNGA 5 cut(s) 31, 136, 571, 751, 777
Hpy188III TCNNGA 7 cut(s) 67, 83, 116, 175, 314, 662, 857
Hpy8I GTNNAC 3 cut(s) 510, 586, 812
Hpy99I CGWCG 4 cut(s) 89, 210, 275, 290
HpyAV CCTTC 3 cut(s) 506, 552, 830
HpyCH4III ACNGT 2 cut(s) 540, 656
HpyCH4IV ACGT 2 cut(s) 208, 273
HpyCH4V TGCA 6 cut(s) 266, 347, 464, 489, 535, 672
HpyF10VI GCNNNNNNNGC 5 cut(s) 99, 227, 325, 353, 461
HpyF3I CTNAG 4 cut(s) 315, 441, 483, 605
HpySE526I ACGT 2 cut(s) 208, 273
Hsp92I GRCGYC 2 cut(s) 120, 273
Hsp92II CATG 3 cut(s) 248, 625, 851
HspAI GCGC 4 cut(s) 61, 100, 356, 602
Ksp22I TGATCA 2 cut(s) 658, 706
LmnI GCTCC 1 cut(s) 316
Lsp1109I GCAGC 4 cut(s) 32, 102, 239, 278
LweI GCATC 4 cut(s) 102, 299, 315, 334
MaeI CTAG 2 cut(s) 329, 564
MaeII ACGT 2 cut(s) 208, 273
MaeIII GTNAC 2 cut(s) 446, 636
MboII GAAGA 1 cut(s) 802
MfeI CAATTG 1 cut(s) 415
MflI RGATCY 1 cut(s) 431
MhlI GDGCHC 2 cut(s) 321, 856
MluCI AATT 2 cut(s) 415, 880
MlyI GAGTC 1 cut(s) 832
MmeI TCCRAC 1 cut(s) 777
MseI TTAA 2 cut(s) 864, 898
MslI CAYNNNNRTG 1 cut(s) 724
MspA1I CMGCKG 2 cut(s) 23, 763
MspI CCGG 2 cut(s) 322, 505
MspR9I CCNGG 1 cut(s) 199
MunI CAATTG 1 cut(s) 415
MvaI CCWGG 1 cut(s) 199
MvnI CGCG 1 cut(s) 100
MwoI GCNNNNNNNGC 5 cut(s) 99, 227, 325, 353, 461
NheI GCTAGC 1 cut(s) 328
NlaIII CATG 3 cut(s) 248, 625, 851
NlaIV GGNNCC 2 cut(s) 312, 433
OliI CACNNNNGTG 1 cut(s) 724
PcsI WCGNNNNNNNCGW 1 cut(s) 294
PfeI GAWTC 3 cut(s) 26, 553, 692
PinAI ACCGGT 1 cut(s) 504
PkrI GCNGC 5 cut(s) 22, 92, 229, 268, 334
PleI GAGTC 1 cut(s) 831
PpsI GAGTC 1 cut(s) 831
Psp6I CCWGG 1 cut(s) 197
PspGI CCWGG 1 cut(s) 197
PspN4I GGNNCC 2 cut(s) 312, 433
PsuI RGATCY 1 cut(s) 431
RsaI GTAC 2 cut(s) 302, 813
RsaNI GTAC 2 cut(s) 301, 812
RseI CAYNNNNRTG 1 cut(s) 724
SaqAI TTAA 2 cut(s) 864, 898
SatI GCNGC 5 cut(s) 21, 91, 228, 267, 333
SchI GAGTC 1 cut(s) 832
ScrFI CCNGG 1 cut(s) 199
SduI GDGCHC 2 cut(s) 321, 856
SfaNI GCATC 4 cut(s) 102, 299, 315, 334
SmiMI CAYNNNNRTG 1 cut(s) 724
SmlI CTYRAG 1 cut(s) 855
SmoI CTYRAG 1 cut(s) 855
SpeI ACTAGT 1 cut(s) 563
Sse9I AATT 2 cut(s) 415, 880
SsiI CCGC 6 cut(s) 23, 125, 219, 332, 683, 761
SspMI CTAG 2 cut(s) 329, 564
StyD4I CCNGG 1 cut(s) 197
TaaI ACNGT 2 cut(s) 540, 656
TaiI ACGT 2 cut(s) 211, 276
TaqI TCGA 4 cut(s) 205, 297, 556, 834
TasI AATT 2 cut(s) 415, 880
TatI WGTACW 2 cut(s) 300, 811
TauI GCSGC 1 cut(s) 335
TfiI GAWTC 3 cut(s) 26, 553, 692
Tru1I TTAA 2 cut(s) 864, 898
Tru9I TTAA 2 cut(s) 864, 898
TscAI CASTG 3 cut(s) 354, 368, 442
TseI GCWGC 4 cut(s) 20, 90, 227, 266
TspDTI ATGAA 1 cut(s) 24
TspRI CASTG 3 cut(s) 354, 368, 442
XspI CTAG 2 cut(s) 329, 564
ZraI GACGTC 1 cut(s) 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.