MD09G1143000.v1.1

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000975
Physical Location & Seq
Forward (+)
11155653 .. 11156218
566 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1143000.v1.1.491

Sequence Viewer

Length: 459 bp
ATGCTTAAATTTGCAAAGCTCCTCCACCATAGAGGCTTTCATATTACCTTCGTCAACTCCAAGTACAACCACAGGCGCTTTCTAAAATCCTCGGGCCCCAGCTCCCTTGATGGCTTGCCTGATTTCCAATTCAAAGCCATCCCAGATGGCCTTCCAGATTCAGATGCAGATACCACCCAAGATGTCCCATTGCTTTGTGATTCAATCAGAAAACAAAATTTCTTGGCTCCCTTCCGTGAACTACTCATGAAACTCAACGGTGATGCCATATCAACATCCACTAATCCTCCAGTAACTTGCATAGTTTCAGATGGTTTCATGTCGCCGTTCACAATCACAGCCGCTGAAGAGATTGAAGTCCCTATAGTGCTGTTCTACACTATTGCTGCATGCAGCTTTATGGGCTGTATACAATTTCGTGCTTTGGTTGAAAAGGGACTTGCACAACTCAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

153

Amino Acids

16.85

Weight (kDa)

6.89

Isoelectric Point (pI)

40.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 409
AciI CCGC 1 cut(s) 342
AcsI RAATTY 2 cut(s) 8, 217
AcuI CTGAAG 1 cut(s) 366
AfaI GTAC 1 cut(s) 65
AgsI TTSAA 4 cut(s) 133, 204, 356, 431
AluBI AGCT 3 cut(s) 19, 102, 396
AluI AGCT 3 cut(s) 19, 102, 396
AlwNI CAGNNNCTG 1 cut(s) 344
Ama87I CYCGRG 1 cut(s) 91
AoxI GGCC 2 cut(s) 94, 148
ApaI GGGCCC 1 cut(s) 98
ApeKI GCWGC 2 cut(s) 386, 393
ApoI RAATTY 2 cut(s) 8, 217
AspLEI GCGC 1 cut(s) 78
AspS9I GGNCC 2 cut(s) 94, 95
AsuHPI GGTGA 1 cut(s) 272
AvaI CYCGRG 1 cut(s) 91
BaeGI GKGCMC 1 cut(s) 98
BanII GRGCYC 1 cut(s) 98
BbvI GCAGC 2 cut(s) 373, 405
BccI CCATC 4 cut(s) 104, 140, 146, 305
BceAI ACGGC 1 cut(s) 310
BfmI CTRYAG 1 cut(s) 363
BfoI RGCGCY 1 cut(s) 79
BisI GCNGC 3 cut(s) 342, 387, 394
BlsI GCNGC 3 cut(s) 343, 388, 395
BmeT110I CYCGRG 1 cut(s) 91
BmgT120I GGNCC 2 cut(s) 94, 95
BmiI GGNNCC 3 cut(s) 96, 97, 228
BmsI GCATC 2 cut(s) 154, 253
BpmI CTGGAG 1 cut(s) 273
BsaJI CCNNGG 1 cut(s) 90
BsaXI ACNNNNNCTCC 2 cut(s) 271, 301
Bse1I ACTGG 1 cut(s) 290
Bse3DI GCAATG 1 cut(s) 188
BseDI CCNNGG 1 cut(s) 90
BseGI GGATG 2 cut(s) 138, 275
BseMI GCAATG 1 cut(s) 188
BseNI ACTGG 1 cut(s) 290
BseRI GAGGAG 1 cut(s) 11
BseSI GKGCMC 1 cut(s) 98
BseXI GCAGC 2 cut(s) 373, 405
BseYI CCCAGC 1 cut(s) 98
BshFI GGCC 2 cut(s) 96, 150
BsiHKCI CYCGRG 1 cut(s) 91
BslFI GGGAC 3 cut(s) 170, 344, 450
BsmFI GGGAC 3 cut(s) 170, 344, 450
BsnI GGCC 2 cut(s) 96, 150
BsoBI CYCGRG 1 cut(s) 91
Bsp120I GGGCCC 1 cut(s) 94
Bsp1286I GDGCHC 1 cut(s) 98
BspACI CCGC 1 cut(s) 342
BspANI GGCC 2 cut(s) 96, 150
BspHI TCATGA 1 cut(s) 246
BspLI GGNNCC 3 cut(s) 96, 97, 228
BsrDI GCAATG 1 cut(s) 188
BsrI ACTGG 1 cut(s) 290
BssECI CCNNGG 1 cut(s) 90
BssNAI GTATAC 1 cut(s) 410
Bst1107I GTATAC 1 cut(s) 410
Bst4CI ACNGT 1 cut(s) 260
Bst6I CTCTTC 1 cut(s) 342
BstC8I GCNNGC 2 cut(s) 116, 391
BstF5I GGATG 2 cut(s) 138, 275
BstH2I RGCGCY 1 cut(s) 79
BstHHI GCGC 1 cut(s) 78
BstMWI GCNNNNNNNGC 1 cut(s) 402
BstNSI RCATGY 1 cut(s) 393
BstSFI CTRYAG 1 cut(s) 363
BstSLI GKGCMC 1 cut(s) 98
BstV1I GCAGC 2 cut(s) 373, 405
BstZ17I GTATAC 1 cut(s) 410
BsuRI GGCC 2 cut(s) 96, 150
BtsCI GGATG 2 cut(s) 138, 275
Cac8I GCNNGC 2 cut(s) 116, 391
CaiI CAGNNNCTG 1 cut(s) 344
CciI TCATGA 1 cut(s) 246
CfoI GCGC 1 cut(s) 78
Cfr13I GGNCC 2 cut(s) 94, 95
Csp6I GTAC 1 cut(s) 64
CviAII CATG 3 cut(s) 247, 319, 390
CviQI GTAC 1 cut(s) 64
Eam1104I CTCTTC 1 cut(s) 342
EarI CTCTTC 1 cut(s) 342
Eco24I GRGCYC 1 cut(s) 98
Eco57I CTGAAG 1 cut(s) 366
Eco88I CYCGRG 1 cut(s) 91
EcoO109I RGGNCCY 1 cut(s) 95
EcoT38I GRGCYC 1 cut(s) 98
FaeI CATG 3 cut(s) 250, 322, 393
FaqI GGGAC 3 cut(s) 170, 344, 450
FatI CATG 3 cut(s) 246, 318, 389
FblI GTMKAC 1 cut(s) 409
Fnu4HI GCNGC 3 cut(s) 342, 387, 394
FokI GGATG 2 cut(s) 125, 262
FriOI GRGCYC 1 cut(s) 98
Fsp4HI GCNGC 3 cut(s) 342, 387, 394
GlaI GCGC 1 cut(s) 77
GluI GCNGC 3 cut(s) 342, 387, 394
GsaI CCCAGC 1 cut(s) 102
GsuI CTGGAG 1 cut(s) 273
HaeII RGCGCY 1 cut(s) 79
HaeIII GGCC 2 cut(s) 96, 150
HhaI GCGC 1 cut(s) 78
Hin1II CATG 3 cut(s) 250, 322, 393
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HinfI GANTC 2 cut(s) 158, 200
HphI GGTGA 1 cut(s) 272
Hpy166II GTNNAC 4 cut(s) 55, 239, 330, 410
Hpy188I TCNGA 3 cut(s) 163, 209, 310
Hpy188III TCNNGA 2 cut(s) 155, 247
Hpy8I GTNNAC 4 cut(s) 55, 239, 330, 410
HpyAV CCTTC 3 cut(s) 58, 161, 241
HpyCH4III ACNGT 1 cut(s) 260
HpyCH4V TGCA 6 cut(s) 14, 167, 300, 389, 393, 443
HpyF10VI GCNNNNNNNGC 1 cut(s) 402
Hsp92II CATG 3 cut(s) 250, 322, 393
HspAI GCGC 1 cut(s) 76
LmnI GCTCC 3 cut(s) 24, 107, 232
LpnPI CCDG 6 cut(s) 58, 112, 132, 156, 168, 303
Lsp1109I GCAGC 2 cut(s) 373, 405
LweI GCATC 2 cut(s) 154, 253
MaeIII GTNAC 1 cut(s) 292
MboII GAAGA 1 cut(s) 359
MhlI GDGCHC 1 cut(s) 98
MluCI AATT 4 cut(s) 8, 128, 217, 413
MnlI CCTC 4 cut(s) 26, 32, 100, 297
MseI TTAA 1 cut(s) 6
MspA1I CMGCKG 1 cut(s) 344
MwoI GCNNNNNNNGC 1 cut(s) 402
NlaIII CATG 3 cut(s) 250, 322, 393
NlaIV GGNNCC 3 cut(s) 96, 97, 228
NspI RCATGY 1 cut(s) 393
PaeI GCATGC 1 cut(s) 393
PagI TCATGA 1 cut(s) 246
PfeI GAWTC 2 cut(s) 158, 200
PkrI GCNGC 3 cut(s) 343, 388, 395
PspFI CCCAGC 1 cut(s) 98
PspN4I GGNNCC 3 cut(s) 96, 97, 228
PspOMI GGGCCC 1 cut(s) 94
PspPI GGNCC 2 cut(s) 94, 95
PstNI CAGNNNCTG 1 cut(s) 344
RsaI GTAC 1 cut(s) 65
RsaNI GTAC 1 cut(s) 64
SaqAI TTAA 1 cut(s) 6
SatI GCNGC 3 cut(s) 342, 387, 394
Sau96I GGNCC 2 cut(s) 94, 95
SduI GDGCHC 1 cut(s) 98
SetI ASST 4 cut(s) 21, 50, 104, 398
SfaNI GCATC 2 cut(s) 154, 253
SfcI CTRYAG 1 cut(s) 363
SphI GCATGC 1 cut(s) 393
Sse9I AATT 4 cut(s) 8, 128, 217, 413
SsiI CCGC 1 cut(s) 342
TaaI ACNGT 1 cut(s) 260
TasI AATT 4 cut(s) 8, 128, 217, 413
TatI WGTACW 1 cut(s) 63
TauI GCSGC 1 cut(s) 344
TfiI GAWTC 2 cut(s) 158, 200
Tru1I TTAA 1 cut(s) 6
Tru9I TTAA 1 cut(s) 6
TseI GCWGC 2 cut(s) 386, 393
TspDTI ATGAA 3 cut(s) 29, 263, 307
TspGWI ACGGA 1 cut(s) 224
XapI RAATTY 2 cut(s) 8, 217
XceI RCATGY 1 cut(s) 393
XmiI GTMKAC 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.