RLG00000020448

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000975
Physical Location & Seq
Forward (+)
65139875 .. 65140864
990 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020448

Sequence Viewer

Length: 585 bp
ATGAGTTCCAAGGAGGTAGCTAATAAGCCTCATGTTATTTGTATTCCAATTCCTGTTCAAAGCCATACAAAGGCAATGCTTAAATTAGCAAAACTCGTCCACCATAAAGGTTCCTTTCACATAACCTTTGTCAACACAGAGTTCGACCACAAACGCTTTCTCAAATCTCTAGGATCGAACTCTTTATATGGCTTACCTGACTTTCAGTTCAAGATCATTCCAGATGGTCTTCCTGTTTCAGATGGGGATGCCACCCAAGACCTCAGTTTGCTTGGTGAATCCATCATGAAAATTTTCCTAGCTCCATTTCGTGACCTCATCATGAAAAATATGAAAGCTGTTTGGCGAACGGGTTCTGGACAAGCTAATAGATTGGATTCCAGGAATGAAAGCCTTCGTAGAGCTTCACAAATTGTTCTTCACAAGTTTATGGCTTCTGGTCTCATTCATCACCAAAGTCTTGAGTTTTCACTATCAGTGGCACCACTGAGTAGTGTTACGTTCAAGCCGCCCACCCTTGAGAGGTTTGGGTGGCCGCCAAAGATGAGGCTTGGAGAGTTAGAAGGAGGTAGAAGAAACAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

195

Amino Acids

21.73

Weight (kDa)

10.0

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 481
AciI CCGC 2 cut(s) 509, 536
AclWI GGATC 1 cut(s) 181
AcoI YGGCCR 1 cut(s) 533
AcsI RAATTY 1 cut(s) 291
AfiI CCNNNNNNNGG 2 cut(s) 70, 522
AgsI TTSAA 3 cut(s) 59, 211, 505
AjnI CCWGG 1 cut(s) 380
AluBI AGCT 5 cut(s) 20, 302, 338, 365, 404
AluI AGCT 5 cut(s) 20, 302, 338, 365, 404
Alw26I GTCTC 1 cut(s) 446
AlwI GGATC 1 cut(s) 181
AoxI GGCC 1 cut(s) 533
ApoI RAATTY 1 cut(s) 291
Asp700I GAANNNNTTC 3 cut(s) 293, 352, 393
AsuHPI GGTGA 2 cut(s) 287, 443
BanI GGYRCC 1 cut(s) 481
BbsI GAAGAC 1 cut(s) 221
BccI CCATC 3 cut(s) 218, 236, 290
BciT130I CCWGG 1 cut(s) 382
BcoDI GTCTC 1 cut(s) 446
BfaI CTAG 2 cut(s) 170, 299
BisI GCNGC 2 cut(s) 509, 536
BlsI GCNGC 2 cut(s) 510, 537
Bme1390I CCNGG 1 cut(s) 382
BmiI GGNNCC 2 cut(s) 112, 483
BmrFI CCNGG 1 cut(s) 382
BmsI GCATC 1 cut(s) 238
BpiI GAAGAC 1 cut(s) 221
BpuEI CTTGAG 2 cut(s) 482, 539
BsaI GGTCTC 1 cut(s) 446
BsaJI CCNNGG 1 cut(s) 9
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 522
Bse3DI GCAATG 1 cut(s) 81
BseBI CCWGG 1 cut(s) 382
BseDI CCNNGG 1 cut(s) 9
BseGI GGATG 1 cut(s) 253
BseLI CCNNNNNNNGG 2 cut(s) 70, 522
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 2 cut(s) 277, 479
BshFI GGCC 1 cut(s) 535
BshNI GGYRCC 1 cut(s) 481
BslI CCNNNNNNNGG 2 cut(s) 70, 522
BsmAI GTCTC 1 cut(s) 446
BsnI GGCC 1 cut(s) 535
Bso31I GGTCTC 1 cut(s) 446
Bsp143I GATC 2 cut(s) 173, 213
BspACI CCGC 2 cut(s) 509, 536
BspANI GGCC 1 cut(s) 535
BspCNI CTCAG 2 cut(s) 276, 480
BspHI TCATGA 2 cut(s) 285, 321
BspLI GGNNCC 2 cut(s) 112, 483
BspPI GGATC 1 cut(s) 181
BspT107I GGYRCC 1 cut(s) 481
BspTNI GGTCTC 1 cut(s) 446
BsrDI GCAATG 1 cut(s) 81
BssECI CCNNGG 1 cut(s) 9
BssMI GATC 2 cut(s) 173, 213
BssT1I CCWWGG 1 cut(s) 9
Bst2UI CCWGG 1 cut(s) 382
Bst4CI ACNGT 1 cut(s) 581
BstDEI CTNAG 2 cut(s) 263, 488
BstF5I GGATG 1 cut(s) 253
BstKTI GATC 2 cut(s) 176, 216
BstMAI GTCTC 1 cut(s) 446
BstMBI GATC 2 cut(s) 173, 213
BstNI CCWGG 1 cut(s) 382
BstSCI CCNGG 1 cut(s) 380
BstV2I GAAGAC 1 cut(s) 221
BsuRI GGCC 1 cut(s) 535
BtsCI GGATG 1 cut(s) 253
BtsIMutI CAGTG 2 cut(s) 483, 485
CciI TCATGA 2 cut(s) 285, 321
CviAII CATG 3 cut(s) 32, 286, 322
DdeI CTNAG 2 cut(s) 263, 488
DpnI GATC 2 cut(s) 175, 215
DpnII GATC 2 cut(s) 173, 213
EaeI YGGCCR 1 cut(s) 533
Eco130I CCWWGG 1 cut(s) 9
Eco31I GGTCTC 1 cut(s) 446
EcoRII CCWGG 1 cut(s) 380
EcoT14I CCWWGG 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 3 cut(s) 35, 289, 325
FatI CATG 3 cut(s) 31, 285, 321
Fnu4HI GCNGC 2 cut(s) 509, 536
FokI GGATG 1 cut(s) 260
Fsp4HI GCNGC 2 cut(s) 509, 536
FspBI CTAG 2 cut(s) 170, 299
GluI GCNGC 2 cut(s) 509, 536
HaeIII GGCC 1 cut(s) 535
Hin1II CATG 3 cut(s) 35, 289, 325
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HinfI GANTC 2 cut(s) 278, 377
HphI GGTGA 2 cut(s) 287, 443
Hpy166II GTNNAC 2 cut(s) 100, 133
Hpy188I TCNGA 1 cut(s) 241
Hpy188III TCNNGA 7 cut(s) 211, 221, 286, 311, 322, 357, 461
Hpy8I GTNNAC 2 cut(s) 100, 133
HpyAV CCTTC 2 cut(s) 404, 557
HpyCH4III ACNGT 1 cut(s) 581
HpyCH4IV ACGT 1 cut(s) 500
HpyF3I CTNAG 2 cut(s) 263, 488
HpySE526I ACGT 1 cut(s) 500
Hsp92II CATG 3 cut(s) 35, 289, 325
Kzo9I GATC 2 cut(s) 173, 213
LmnI GCTCC 1 cut(s) 307
LpnPI CCDG 8 cut(s) 66, 210, 234, 246, 342, 367, 394, 423
LweI GCATC 1 cut(s) 238
MaeI CTAG 2 cut(s) 170, 299
MaeII ACGT 1 cut(s) 500
MaeIII GTNAC 2 cut(s) 311, 496
MalI GATC 2 cut(s) 175, 215
MboI GATC 2 cut(s) 173, 213
MboII GAAGA 3 cut(s) 221, 410, 585
MluCI AATT 4 cut(s) 48, 83, 291, 411
MnlI CCTC 7 cut(s) 7, 39, 272, 326, 516, 540, 560
MroXI GAANNNNTTC 3 cut(s) 293, 352, 393
MseI TTAA 1 cut(s) 81
MspR9I CCNGG 1 cut(s) 382
MvaI CCWGG 1 cut(s) 382
NdeII GATC 2 cut(s) 173, 213
NlaIII CATG 3 cut(s) 35, 289, 325
NlaIV GGNNCC 2 cut(s) 112, 483
NmuCI GTSAC 1 cut(s) 311
PagI TCATGA 2 cut(s) 285, 321
PdmI GAANNNNTTC 3 cut(s) 293, 352, 393
PfeI GAWTC 2 cut(s) 278, 377
PfoI TCCNGGA 1 cut(s) 380
PkrI GCNGC 2 cut(s) 510, 537
Psp6I CCWGG 1 cut(s) 380
PspGI CCWGG 1 cut(s) 380
PspN4I GGNNCC 2 cut(s) 112, 483
SaqAI TTAA 1 cut(s) 81
SatI GCNGC 2 cut(s) 509, 536
Sau3AI GATC 2 cut(s) 173, 213
ScrFI CCNGG 1 cut(s) 382
SfaNI GCATC 1 cut(s) 238
SmlI CTYRAG 2 cut(s) 461, 518
SmoI CTYRAG 2 cut(s) 461, 518
Sse9I AATT 4 cut(s) 48, 83, 291, 411
SsiI CCGC 2 cut(s) 509, 536
SspMI CTAG 2 cut(s) 170, 299
StyD4I CCNGG 1 cut(s) 380
StyI CCWWGG 1 cut(s) 9
TaaI ACNGT 1 cut(s) 581
TaiI ACGT 1 cut(s) 503
TaqI TCGA 2 cut(s) 144, 176
TasI AATT 4 cut(s) 48, 83, 291, 411
TauI GCSGC 2 cut(s) 511, 538
TfiI GAWTC 2 cut(s) 278, 377
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TscAI CASTG 2 cut(s) 483, 492
TseFI GTSAC 1 cut(s) 311
Tsp45I GTSAC 1 cut(s) 311
TspDTI ATGAA 5 cut(s) 302, 338, 347, 402, 437
TspRI CASTG 2 cut(s) 483, 492
XapI RAATTY 1 cut(s) 291
XmnI GAANNNNTTC 3 cut(s) 293, 352, 393
XspI CTAG 2 cut(s) 170, 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.