Prupe.6G190200_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
19758697 .. 19759928
1232 bp
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UTR
Exon/CDS
Intron
Prupe.6G190200.1

Sequence Viewer

Length: 291 bp
ATGGGCCTTCCACCATCTGACAAAGATGCTACCCAAGATGTTCCTGCACTCAGTGATTCCATCAGAAAAAACTGTCTTGGTCCCTTCAAAGAGCTTCTGGTTAAGCTTGGTGAATTGTCTGAAGTGTCCCCAGTTACTTGCATAATTTCAGATGAGGTCATGGGGTTTGGGAGCAGAGCTGCGATGGAATTGGGCATTCCAGAGGTTCAGTTTTGGACTGCCTCTACTTGTGGCTTCATGGGTTCTTGGACCCTTTTGTTTTCTTATTTTTATTCAAGCCCTCAATTTTAA

Protein Analysis

97

Amino Acids

10.48

Weight (kDa)

4.37

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 141
AdeI CACNNNGTG 1 cut(s) 53
AgsI TTSAA 2 cut(s) 88, 276
AluBI AGCT 3 cut(s) 94, 106, 179
AluI AGCT 3 cut(s) 94, 106, 179
AoxI GGCC 1 cut(s) 4
ApeKI GCWGC 1 cut(s) 179
AspS9I GGNCC 3 cut(s) 4, 80, 249
AsuHPI GGTGA 1 cut(s) 122
AvaII GGWCC 2 cut(s) 80, 249
BbvI GCAGC 1 cut(s) 166
BccI CCATC 3 cut(s) 22, 68, 178
BisI GCNGC 1 cut(s) 180
BlsI GCNGC 1 cut(s) 181
Bme18I GGWCC 2 cut(s) 80, 249
BmgT120I GGNCC 3 cut(s) 4, 80, 249
BmiI GGNNCC 2 cut(s) 82, 251
BmrI ACTGGG 1 cut(s) 125
BmsI GCATC 1 cut(s) 16
BmuI ACTGGG 1 cut(s) 125
Bse1I ACTGG 1 cut(s) 131
BseMII CTCAG 1 cut(s) 64
BseNI ACTGG 1 cut(s) 131
BseXI GCAGC 1 cut(s) 166
BsgI GTGCAG 1 cut(s) 30
BshFI GGCC 1 cut(s) 6
BslFI GGGAC 2 cut(s) 66, 112
BsmFI GGGAC 2 cut(s) 66, 112
BsmI GAATGC 1 cut(s) 195
BsnI GGCC 1 cut(s) 6
BspANI GGCC 1 cut(s) 6
BspCNI CTCAG 1 cut(s) 63
BspLI GGNNCC 2 cut(s) 82, 251
BsrI ACTGG 1 cut(s) 131
Bst4CI ACNGT 1 cut(s) 74
BstDEI CTNAG 1 cut(s) 50
BstV1I GCAGC 1 cut(s) 166
BsuRI GGCC 1 cut(s) 6
BtgZI GCGATG 1 cut(s) 197
BtsIMutI CAGTG 1 cut(s) 58
Cfr13I GGNCC 3 cut(s) 4, 80, 249
CviAII CATG 2 cut(s) 160, 238
CviJI RGCY 6 cut(s) 6, 94, 106, 179, 234, 279
CviKI_1 RGCY 6 cut(s) 6, 94, 106, 179, 234, 279
DdeI CTNAG 1 cut(s) 50
DraIII CACNNNGTG 1 cut(s) 53
Eco47I GGWCC 2 cut(s) 80, 249
Eco57I CTGAAG 1 cut(s) 141
FaeI CATG 2 cut(s) 163, 241
FaiI YATR 3 cut(s) 143, 161, 239
FaqI GGGAC 2 cut(s) 66, 112
FatI CATG 2 cut(s) 159, 237
Fnu4HI GCNGC 1 cut(s) 180
Fsp4HI GCNGC 1 cut(s) 180
GluI GCNGC 1 cut(s) 180
HaeIII GGCC 1 cut(s) 6
Hin1II CATG 2 cut(s) 163, 241
HindIII AAGCTT 1 cut(s) 104
HinfI GANTC 1 cut(s) 56
HphI GGTGA 1 cut(s) 122
Hpy188I TCNGA 4 cut(s) 19, 65, 121, 151
Hpy188III TCNNGA 1 cut(s) 200
HpyAV CCTTC 2 cut(s) 17, 94
HpyCH4III ACNGT 1 cut(s) 74
HpyCH4V TGCA 2 cut(s) 47, 141
HpyF3I CTNAG 1 cut(s) 50
Hsp92II CATG 2 cut(s) 163, 241
LmnI GCTCC 1 cut(s) 171
LpnPI CCDG 4 cut(s) 57, 83, 144, 213
Lsp1109I GCAGC 1 cut(s) 166
LweI GCATC 1 cut(s) 16
MaeIII GTNAC 1 cut(s) 133
MluCI AATT 4 cut(s) 113, 144, 188, 284
MnlI CCTC 4 cut(s) 148, 196, 232, 291
MseI TTAA 2 cut(s) 102, 289
Mva1269I GAATGC 1 cut(s) 195
NlaIII CATG 2 cut(s) 163, 241
NlaIV GGNNCC 2 cut(s) 82, 251
PctI GAATGC 1 cut(s) 195
PfeI GAWTC 1 cut(s) 56
PkrI GCNGC 1 cut(s) 181
PspN4I GGNNCC 2 cut(s) 82, 251
PspPI GGNCC 3 cut(s) 4, 80, 249
SaqAI TTAA 2 cut(s) 102, 289
SatI GCNGC 1 cut(s) 180
Sau96I GGNCC 3 cut(s) 4, 80, 249
SetI ASST 5 cut(s) 96, 108, 159, 181, 207
SfaNI GCATC 1 cut(s) 16
SinI GGWCC 2 cut(s) 80, 249
Sse9I AATT 4 cut(s) 113, 144, 188, 284
TaaI ACNGT 1 cut(s) 74
TasI AATT 4 cut(s) 113, 144, 188, 284
TfiI GAWTC 1 cut(s) 56
Tru1I TTAA 2 cut(s) 102, 289
Tru9I TTAA 2 cut(s) 102, 289
TscAI CASTG 1 cut(s) 58
TseI GCWGC 1 cut(s) 179
TspDTI ATGAA 1 cut(s) 226
TspRI CASTG 1 cut(s) 58
VpaK11BI GGWCC 2 cut(s) 80, 249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.