Rorug07G0222800

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000975
Physical Location & Seq
Reverse (-)
20167947 .. 20171108
3162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0222800.1

Sequence Viewer

Length: 2139 bp
ATGAGTCTGAGGTACTTAGTTTCCAGGCAATCAGTGTCAAAATTCACTGCTAGGCTTCGGTCTCAGTATGCCGCTGCGTATGGTTTCGCAACCGTTGCAGACCCAATACCCAGTTCATTTCGTTCTGCAACTCATCATGCTGGGTCTAAACCTCTCAAAAACCCTAGCCACCCAATACCCATGTGGTCGTTTTGTAGAGGCATTCACTCCGCTCAAGTGGTTGATTCGGTGGATTCCGAGGAGGAGGAGGAGGAAGATGGAGGCATTAATGAGTTCTTGTCCCGATTCGTGTGGATTATACGGCAGAAGCTCAATGTGGCTTACCCCGGTTGCGATAAGGAAACTGTGGATGGGATGCTGATGGTTATTGTGCAGAGGGTTGTGGAGGAGATGGAGCAGGGCGGGTTTGAGCAGATGCTTGGCGAGAGGCAGGGTGCTGCTCCGTCGCAGGATTTTAGTGAGGATTTGTGGAGAACAGTGTGGGAGGTGAGCAATATGGTTTTGGATGACATGAGGAAGGAAGCGAGGAAGGAGAAAATGAAGGGGTTTCTGCATGCTGAGGAAGTCAAGGAGATGTGTAGGTTTGCTGGTGAAGTTGGTATCCGGGGGGATATGCTTAGAGAGCTCAGGTTCAAGTGGGCTCGCGAGAAGATGGAGGAGACTGAGTTTTATGAGAGCTTGGAGCTTCTTAGAGAACAAGAGAAAGCCCAAGAGAAAGGGGAGGAGGAAGGCGAGGTTGTGCAAGCTGATGAGGAGGCTGGTGTAACTGAGGTGAATCCTAAGGTTGGTTCTCTTCCCAAGAGGCGAGGGAAGATAAGGTACAAAATTTATGGTCTTGATCTCTCTGATCCGAAGTGGGTTGAAGTTGTTGATAGAATCCATGAGGCAGGGGAGGTCATTTGTCCCCAGGAACCGAAACCAATATCTGGGAAATGCAAGTTGGTTACTGAGAGAATTCTTCAATCAAATGAGGCAGATGACATGTCTCCACTTTTGGCTGAATGGGTGGAGTTGCTCCAACCTAGTATGATTGATTGGGACAATTTGCTTGATCAATTGAAAGAGCAGAACACCAGGTTATACTTTAAGGTGGCAGAACTTGTATTGGATGAGAAATCTTTCCAGACGAACATCCGTGACTACTCCATGCTTATCGATGCTTATGCCAAGGAAAATAACGTAGAAGATGCTGAGAGAATTTTAAAGAAGATGAATGAAAATGGGTTTGAACCTGATATCTTAACAACCACTATTTTGGTTCACATGTACAGCAAGGCAGGCAATCTTGAAGGTGCCGACCAAGCATTTAAGACATTGAAGATCCAGGGCTTCCGACCAGATATGAAGGTCTACAATTCCATGATCAAGGCATATGTAAATGCTAACCGACCGAAATTGGGGGAGTCATTGATGAGAGAGATGGAATCAAGAGACATCAAACCCACAAAAGAAATTTACATGGCATTGCTTCAATCATTTGCCCAACTTGGTGATGTGAAGGGAGCGGAACGAATTGTCAACACTATGATTATGGCAGGTTTTCAGCCAACTTTAGAATCTTGTTCAGTGCTTGTTGAGGCATATGGAAAAGCTGGTGACCCTGATCAGGCAAGGCACAACTTTGATTACATAATAAAAGTTGGGCACAAACCTGACGACAAGTGCACTGCAAGCATGATTGCAGCTTATGAAAAGAAAAATTTACTCGATAAGGCACTGGATTTGTTGTTGCAGCTTGAAAAGGATGGCTTTGAGCCGGGAGTTGCTACTTACACAGTTCTTGTAGATTGGCTGGGAAAACTGCAGCTAGTTAGTGAGGCTGAACAGCTATTGGACAAAATTGCTGAGCTGGGTGAGGCTCCTCCATTGCAACTTCATGTAAGCATTTGCGATATGTATGCTAGGGCTGGATTTGAGAAAAAGGCACTACAAGCTTTGGGAGTTTTGGAGGCTAAGAAGGAGCAACTGAGTTTAGATGACTATGAGACAATTATTGAGGGGCTTATGGCTGGTGGATTTTTTCAGGATGCTCAGAGGATACGGGGAGTGATGGAGGCTCAGGGTTTTGTTGCGTCACAGCAACTTCAGTTGCACCTAGTGGCTAAAAGTTTTACCCTCAAGAGGCCATCAATGAGATAA

Protein Analysis

712

Amino Acids

80.77

Weight (kDa)

5.1

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 368 - 462 3.7e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 370 - 415 3.9e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 381 - 425 7.2e-10 PPR repeat family
PPR PF01535 381 - 409 9.9e-06 PPR repeat
PPR_long PF17177 387 - 525 9.1e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 399 - 460 3.4e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 446 - 482 8e-06 PPR repeat family
PPR_3 PF13812 469 - 530 1.2e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 558 - 599 7.5e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1526
AccB1I GGYRCC 1 cut(s) 1292
AccB7I CCANNNNNTGG 1 cut(s) 926
AccBSI CCGCTC 2 cut(s) 212, 1505
AccI GTMKAC 1 cut(s) 1350
AccII CGCG 1 cut(s) 645
AciI CCGC 4 cut(s) 72, 210, 402, 1505
AclWI GGATC 2 cut(s) 842, 1315
AcsI RAATTY 6 cut(s) 41, 825, 954, 1197, 1452, 1699
AcuI CTGAAG 1 cut(s) 2069
AdeI CACNNNGTG 1 cut(s) 2098
AfaI GTAC 3 cut(s) 14, 821, 1268
AfiI CCNNNNNNNGG 5 cut(s) 785, 926, 1397, 1606, 2121
AflIII ACRYGT 2 cut(s) 981, 1263
AgsI TTSAA 9 cut(s) 634, 863, 962, 1060, 1229, 1289, 1318, 1472, 1739
AjnI CCWGG 4 cut(s) 23, 906, 1073, 1323
AjuI GAANNNNNNNTTGG 4 cut(s) 97, 129, 923, 955
Alw21I GWGCWC 2 cut(s) 627, 1667
Alw26I GTCTC 5 cut(s) 66, 653, 990, 1425, 1979
Alw44I GTGCAC 1 cut(s) 1663
AlwI GGATC 2 cut(s) 842, 1315
AoxI GGCC 1 cut(s) 2123
ApaLI GTGCAC 1 cut(s) 1663
ApeKI GCWGC 5 cut(s) 74, 437, 1682, 1732, 1804
ApoI RAATTY 6 cut(s) 41, 825, 954, 1197, 1452, 1699
AseI ATTAAT 1 cut(s) 267
Asp700I GAANNNNTTC 1 cut(s) 1118
AsuC2I CCSGG 3 cut(s) 327, 605, 1758
AsuHPI GGTGA 6 cut(s) 499, 602, 784, 1502, 1607, 1865
AxyI CCTNAGG 1 cut(s) 780
BaeGI GKGCMC 2 cut(s) 1647, 1667
BanI GGYRCC 1 cut(s) 1292
BanII GRGCYC 2 cut(s) 627, 643
BarI GAAGNNNNNNTAC 2 cut(s) 803, 835
Bbv12I GWGCWC 2 cut(s) 627, 1667
BbvCI CCTCAGC 1 cut(s) 558
BbvI GCAGC 5 cut(s) 61, 424, 1694, 1744, 1816
BccI CCATC 9 cut(s) 251, 344, 355, 385, 646, 1414, 1739, 2044, 2134
BceAI ACGGC 1 cut(s) 317
BcgI CGANNNNNNTGC 4 cut(s) 1145, 1179, 1880, 1914
BciT130I CCWGG 4 cut(s) 25, 908, 1075, 1325
BciVI GTATCC 2 cut(s) 611, 2031
BclI TGATCA 3 cut(s) 1051, 1362, 1603
BcnI CCSGG 3 cut(s) 327, 605, 1758
BcoDI GTCTC 5 cut(s) 66, 653, 990, 1425, 1979
BfaI CTAG 6 cut(s) 51, 165, 1023, 1808, 1902, 2096
BfmI CTRYAG 1 cut(s) 1802
BfuAI ACCTGC 1 cut(s) 1526
BfuI GTATCC 2 cut(s) 611, 2031
BisI GCNGC 6 cut(s) 72, 75, 438, 1683, 1733, 1805
BlpI GCTNAGC 1 cut(s) 1845
BlsI GCNGC 6 cut(s) 73, 76, 439, 1684, 1734, 1806
Bme1390I CCNGG 7 cut(s) 25, 327, 605, 908, 1075, 1325, 1758
BmiI GGNNCC 3 cut(s) 912, 1294, 1860
BmrFI CCNGG 7 cut(s) 25, 327, 605, 908, 1075, 1325, 1758
BmrI ACTGGG 1 cut(s) 105
BmsI GCATC 5 cut(s) 345, 405, 1147, 1177, 2017
BmuI ACTGGG 1 cut(s) 105
Bpu10I CCTNAGC 3 cut(s) 558, 626, 2058
Bpu1102I GCTNAGC 1 cut(s) 1845
BpuEI CTTGAG 2 cut(s) 198, 2102
BpuMI CCSGG 3 cut(s) 327, 605, 1758
Bsa29I ATCGAT 1 cut(s) 1155
BsaI GGTCTC 1 cut(s) 66
BsaJI CCNNGG 6 cut(s) 237, 325, 604, 906, 1167, 1324
BsaXI ACNNNNNCTCC 2 cut(s) 650, 680
Bsc4I CCNNNNNNNGG 5 cut(s) 785, 926, 1397, 1606, 2121
Bse1I ACTGG 2 cut(s) 111, 1722
Bse21I CCTNAGG 1 cut(s) 780
Bse3DI GCAATG 2 cut(s) 1463, 1865
BseBI CCWGG 4 cut(s) 25, 908, 1075, 1325
BseCI ATCGAT 1 cut(s) 1155
BseDI CCNNGG 6 cut(s) 237, 325, 604, 906, 1167, 1324
BseGI GGATG 7 cut(s) 355, 360, 511, 1114, 1131, 1750, 2032
BseLI CCNNNNNNNGG 5 cut(s) 785, 926, 1397, 1606, 2121
BseMI GCAATG 2 cut(s) 1463, 1865
BseNI ACTGG 2 cut(s) 111, 1722
BseRI GAGGAG 9 cut(s) 254, 257, 260, 263, 401, 671, 737, 767, 1851
BseSI GKGCMC 2 cut(s) 1647, 1667
BseXI GCAGC 5 cut(s) 61, 424, 1694, 1744, 1816
BseYI CCCAGC 3 cut(s) 140, 1792, 1849
BsgI GTGCAG 1 cut(s) 392
Bsh1236I CGCG 1 cut(s) 645
Bsh1285I CGRYCG 1 cut(s) 1391
BshFI GGCC 1 cut(s) 2125
BshNI GGYRCC 1 cut(s) 1292
BshVI ATCGAT 1 cut(s) 1155
BsiEI CGRYCG 1 cut(s) 1391
BsiHKAI GWGCWC 2 cut(s) 627, 1667
BsiSI CCGG 3 cut(s) 327, 604, 1757
BslFI GGGAC 3 cut(s) 265, 888, 1052
BslI CCNNNNNNNGG 5 cut(s) 785, 926, 1397, 1606, 2121
BsmAI GTCTC 5 cut(s) 66, 653, 990, 1425, 1979
BsmFI GGGAC 3 cut(s) 265, 888, 1052
BsmI GAATGC 1 cut(s) 201
BsnI GGCC 1 cut(s) 2125
Bso31I GGTCTC 1 cut(s) 66
Bsp1286I GDGCHC 4 cut(s) 627, 643, 1647, 1667
Bsp1407I TGTACA 1 cut(s) 1266
Bsp143I GATC 6 cut(s) 838, 847, 1051, 1320, 1362, 1603
Bsp1720I GCTNAGC 1 cut(s) 1845
Bsp68I TCGCGA 1 cut(s) 645
BspACI CCGC 4 cut(s) 72, 210, 402, 1505
BspANI GGCC 1 cut(s) 2125
BspDI ATCGAT 1 cut(s) 1155
BspFNI CGCG 1 cut(s) 645
BspLI GGNNCC 3 cut(s) 912, 1294, 1860
BspMAI CTGCAG 1 cut(s) 1806
BspMI ACCTGC 1 cut(s) 1526
BspPI GGATC 2 cut(s) 842, 1315
BspT107I GGYRCC 1 cut(s) 1292
BspTNI GGTCTC 1 cut(s) 66
BsrBI CCGCTC 2 cut(s) 212, 1505
BsrDI GCAATG 2 cut(s) 1463, 1865
BsrGI TGTACA 1 cut(s) 1266
BsrI ACTGG 2 cut(s) 111, 1722
BssECI CCNNGG 6 cut(s) 237, 325, 604, 906, 1167, 1324
BssMI GATC 6 cut(s) 838, 847, 1051, 1320, 1362, 1603
BssT1I CCWWGG 1 cut(s) 1167
Bst2UI CCWGG 4 cut(s) 25, 908, 1075, 1325
Bst4CI ACNGT 4 cut(s) 94, 346, 478, 1777
Bst6I CTCTTC 1 cut(s) 798
BstAPI GCANNNNNTGC 1 cut(s) 95
BstAUI TGTACA 1 cut(s) 1266
BstC8I GCNNGC 5 cut(s) 555, 643, 744, 1279, 1672
BstEII GGTNACC 1 cut(s) 1595
BstF5I GGATG 7 cut(s) 355, 360, 511, 1114, 1131, 1750, 2032
BstFNI CGCG 1 cut(s) 645
BstKTI GATC 6 cut(s) 841, 850, 1054, 1323, 1365, 1606
BstMAI GTCTC 5 cut(s) 66, 653, 990, 1425, 1979
BstMBI GATC 6 cut(s) 838, 847, 1051, 1320, 1362, 1603
BstMCI CGRYCG 1 cut(s) 1391
BstMWI GCNNNNNNNGC 6 cut(s) 95, 622, 1278, 1301, 1671, 1931
BstNI CCWGG 4 cut(s) 25, 908, 1075, 1325
BstNSI RCATGY 3 cut(s) 557, 985, 1267
BstPI GGTNACC 1 cut(s) 1595
BstSCI CCNGG 7 cut(s) 23, 325, 603, 906, 1073, 1323, 1756
BstSFI CTRYAG 1 cut(s) 1802
BstSLI GKGCMC 2 cut(s) 1647, 1667
BstUI CGCG 1 cut(s) 645
BstV1I GCAGC 5 cut(s) 61, 424, 1694, 1744, 1816
BstX2I RGATCY 1 cut(s) 1320
BstXI CCANNNNNNTGG 1 cut(s) 1255
BstYI RGATCY 1 cut(s) 1320
Bsu15I ATCGAT 1 cut(s) 1155
Bsu36I CCTNAGG 1 cut(s) 780
BsuI GTATCC 2 cut(s) 611, 2031
BsuRI GGCC 1 cut(s) 2125
BsuTUI ATCGAT 1 cut(s) 1155
BtsCI GGATG 7 cut(s) 355, 360, 511, 1114, 1131, 1750, 2032
BtsI GCAGTG 2 cut(s) 45, 1665
BtsIMutI CAGTG 6 cut(s) 39, 45, 483, 1572, 1665, 1715
BtuMI TCGCGA 1 cut(s) 645
BveI ACCTGC 1 cut(s) 1526
Cac8I GCNNGC 5 cut(s) 555, 643, 744, 1279, 1672
ClaI ATCGAT 1 cut(s) 1155
CseI GACGC 1 cut(s) 2061
CsiI ACCWGGT 1 cut(s) 1073
Csp6I GTAC 3 cut(s) 13, 820, 1267
CviQI GTAC 3 cut(s) 13, 820, 1267
DpnI GATC 6 cut(s) 840, 849, 1053, 1322, 1364, 1605
DpnII GATC 6 cut(s) 838, 847, 1051, 1320, 1362, 1603
DraI TTTAAA 1 cut(s) 1203
DraIII CACNNNGTG 1 cut(s) 2098
Eam1104I CTCTTC 1 cut(s) 798
EarI CTCTTC 1 cut(s) 798
Ecl136II GAGCTC 1 cut(s) 625
Eco130I CCWWGG 1 cut(s) 1167
Eco24I GRGCYC 2 cut(s) 627, 643
Eco31I GGTCTC 1 cut(s) 66
Eco32I GATATC 1 cut(s) 1237
Eco53kI GAGCTC 1 cut(s) 625
Eco57I CTGAAG 1 cut(s) 2069
Eco81I CCTNAGG 1 cut(s) 780
Eco91I GGTNACC 1 cut(s) 1595
EcoICRI GAGCTC 1 cut(s) 625
EcoO65I GGTNACC 1 cut(s) 1595
EcoRI GAATTC 1 cut(s) 954
EcoRII CCWGG 4 cut(s) 23, 906, 1073, 1323
EcoRV GATATC 1 cut(s) 1237
EcoT14I CCWWGG 1 cut(s) 1167
EcoT38I GRGCYC 2 cut(s) 627, 643
ErhI CCWWGG 1 cut(s) 1167
FalI AAGNNNNNCTT 2 cut(s) 1733, 1765
FaqI GGGAC 3 cut(s) 265, 888, 1052
FauI CCCGC 1 cut(s) 395
FauNDI CATATG 2 cut(s) 1372, 1582
FbaI TGATCA 3 cut(s) 1051, 1362, 1603
FblI GTMKAC 1 cut(s) 1350
Fnu4HI GCNGC 6 cut(s) 72, 75, 438, 1683, 1733, 1805
FokI GGATG 7 cut(s) 362, 367, 518, 1118, 1121, 1757, 2039
FriOI GRGCYC 2 cut(s) 627, 643
Fsp4HI GCNGC 6 cut(s) 72, 75, 438, 1683, 1733, 1805
FspBI CTAG 6 cut(s) 51, 165, 1023, 1808, 1902, 2096
GluI GCNGC 6 cut(s) 72, 75, 438, 1683, 1733, 1805
GsaI CCCAGC 3 cut(s) 144, 1796, 1853
HaeIII GGCC 1 cut(s) 2125
HapII CCGG 3 cut(s) 327, 604, 1757
HgaI GACGC 1 cut(s) 2061
HincII GTYRAC 1 cut(s) 1519
HindII GTYRAC 1 cut(s) 1519
HindIII AAGCTT 1 cut(s) 1932
HinfI GANTC 9 cut(s) 4, 224, 233, 285, 775, 876, 1403, 1424, 1556
HpaII CCGG 3 cut(s) 327, 604, 1757
HphI GGTGA 6 cut(s) 499, 602, 784, 1502, 1607, 1865
Hpy166II GTNNAC 4 cut(s) 1261, 1351, 1519, 1665
Hpy188I TCNGA 6 cut(s) 9, 238, 847, 852, 1334, 2034
Hpy188III TCNNGA 8 cut(s) 282, 644, 836, 1123, 1286, 1428, 2024, 2119
Hpy8I GTNNAC 4 cut(s) 1261, 1351, 1519, 1665
Hpy99I CGWCG 1 cut(s) 448
HpyAV CCTTC 8 cut(s) 511, 523, 535, 722, 1283, 1339, 1492, 1951
HpyCH4III ACNGT 4 cut(s) 94, 346, 478, 1777
HpyCH4IV ACGT 1 cut(s) 1179
HpyF10VI GCNNNNNNNGC 6 cut(s) 95, 622, 1278, 1301, 1671, 1931
HpySE526I ACGT 1 cut(s) 1179
Ksp22I TGATCA 3 cut(s) 1051, 1362, 1603
Kzo9I GATC 6 cut(s) 838, 847, 1051, 1320, 1362, 1603
LmnI GCTCC 7 cut(s) 394, 445, 682, 1020, 1502, 1864, 1960
Lsp1109I GCAGC 5 cut(s) 61, 424, 1694, 1744, 1816
LweI GCATC 5 cut(s) 345, 405, 1147, 1177, 2017
MabI ACCWGGT 1 cut(s) 1073
MaeI CTAG 6 cut(s) 51, 165, 1023, 1808, 1902, 2096
MaeII ACGT 1 cut(s) 1179
MaeIII GTNAC 5 cut(s) 763, 943, 1136, 1595, 2073
MalI GATC 6 cut(s) 840, 849, 1053, 1322, 1364, 1605
MbiI CCGCTC 2 cut(s) 212, 1505
MboI GATC 6 cut(s) 838, 847, 1051, 1320, 1362, 1603
MboII GAAGA 8 cut(s) 266, 661, 785, 823, 950, 1196, 1219, 1330
MfeI CAATTG 1 cut(s) 1055
MflI RGATCY 1 cut(s) 1320
MhlI GDGCHC 4 cut(s) 627, 643, 1647, 1667
MlyI GAGTC 2 cut(s) 13, 1412
MmeI TCCRAC 2 cut(s) 1042, 1357
MroXI GAANNNNTTC 1 cut(s) 1118
MseI TTAA 5 cut(s) 267, 1086, 1202, 1241, 1308
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 3 cut(s) 327, 604, 1757
MspR9I CCNGG 7 cut(s) 25, 327, 605, 908, 1075, 1325, 1758
MunI CAATTG 1 cut(s) 1055
Mva1269I GAATGC 1 cut(s) 201
MvaI CCWGG 4 cut(s) 25, 908, 1075, 1325
MvnI CGCG 1 cut(s) 645
MwoI GCNNNNNNNGC 6 cut(s) 95, 622, 1278, 1301, 1671, 1931
NciI CCSGG 3 cut(s) 327, 605, 1758
NdeI CATATG 2 cut(s) 1372, 1582
NdeII GATC 6 cut(s) 838, 847, 1051, 1320, 1362, 1603
NlaIV GGNNCC 3 cut(s) 912, 1294, 1860
NmuCI GTSAC 3 cut(s) 1136, 1595, 2073
NruI TCGCGA 1 cut(s) 645
NspI RCATGY 3 cut(s) 557, 985, 1267
PaeI GCATGC 1 cut(s) 557
PciI ACATGT 2 cut(s) 981, 1263
PctI GAATGC 1 cut(s) 201
PdmI GAANNNNTTC 1 cut(s) 1118
PfeI GAWTC 7 cut(s) 224, 233, 285, 775, 876, 1424, 1556
PflMI CCANNNNNTGG 1 cut(s) 926
PkrI GCNGC 6 cut(s) 73, 76, 439, 1684, 1734, 1806
PleI GAGTC 2 cut(s) 12, 1411
PpsI GAGTC 2 cut(s) 12, 1411
PscI ACATGT 2 cut(s) 981, 1263
PshBI ATTAAT 1 cut(s) 267
Psp124BI GAGCTC 1 cut(s) 627
Psp6I CCWGG 4 cut(s) 23, 906, 1073, 1323
PspEI GGTNACC 1 cut(s) 1595
PspFI CCCAGC 3 cut(s) 140, 1792, 1849
PspGI CCWGG 4 cut(s) 23, 906, 1073, 1323
PspN4I GGNNCC 3 cut(s) 912, 1294, 1860
PstI CTGCAG 1 cut(s) 1806
PsuI RGATCY 1 cut(s) 1320
RruI TCGCGA 1 cut(s) 645
RsaI GTAC 3 cut(s) 14, 821, 1268
RsaNI GTAC 3 cut(s) 13, 820, 1267
SacI GAGCTC 1 cut(s) 627
SaqAI TTAA 5 cut(s) 267, 1086, 1202, 1241, 1308
SatI GCNGC 6 cut(s) 72, 75, 438, 1683, 1733, 1805
Sau3AI GATC 6 cut(s) 838, 847, 1051, 1320, 1362, 1603
SchI GAGTC 2 cut(s) 13, 1412
ScrFI CCNGG 7 cut(s) 25, 327, 605, 908, 1075, 1325, 1758
SduI GDGCHC 4 cut(s) 627, 643, 1647, 1667
SexAI ACCWGGT 1 cut(s) 1073
SfaNI GCATC 5 cut(s) 345, 405, 1147, 1177, 2017
SfcI CTRYAG 1 cut(s) 1802
SmlI CTYRAG 2 cut(s) 213, 2117
SmoI CTYRAG 2 cut(s) 213, 2117
SphI GCATGC 1 cut(s) 557
SsiI CCGC 4 cut(s) 72, 210, 402, 1505
SspMI CTAG 6 cut(s) 51, 165, 1023, 1808, 1902, 2096
SstI GAGCTC 1 cut(s) 627
StyD4I CCNGG 7 cut(s) 23, 325, 603, 906, 1073, 1323, 1756
StyI CCWWGG 1 cut(s) 1167
TaaI ACNGT 4 cut(s) 94, 346, 478, 1777
TaiI ACGT 1 cut(s) 1182
TaqI TCGA 2 cut(s) 1155, 1707
TaqII GACCGA 2 cut(s) 48, 1405
TatI WGTACW 1 cut(s) 1266
TauI GCSGC 1 cut(s) 74
TfiI GAWTC 7 cut(s) 224, 233, 285, 775, 876, 1424, 1556
Tru1I TTAA 5 cut(s) 267, 1086, 1202, 1241, 1308
Tru9I TTAA 5 cut(s) 267, 1086, 1202, 1241, 1308
TscAI CASTG 6 cut(s) 39, 52, 483, 1572, 1672, 1722
TseFI GTSAC 3 cut(s) 1136, 1595, 2073
TseI GCWGC 5 cut(s) 74, 437, 1682, 1732, 1804
Tsp45I GTSAC 3 cut(s) 1136, 1595, 2073
TspDTI ATGAA 7 cut(s) 105, 554, 1226, 1230, 1358, 1704, 1865
TspGWI ACGGA 2 cut(s) 432, 1124
TspRI CASTG 6 cut(s) 39, 52, 483, 1572, 1672, 1722
Van91I CCANNNNNTGG 1 cut(s) 926
VneI GTGCAC 1 cut(s) 1663
VspI ATTAAT 1 cut(s) 267
XapI RAATTY 6 cut(s) 41, 825, 954, 1197, 1452, 1699
XceI RCATGY 3 cut(s) 557, 985, 1267
XcmI CCANNNNNNNNNTGG 1 cut(s) 180
XmiI GTMKAC 1 cut(s) 1350
XmnI GAANNNNTTC 1 cut(s) 1118
XspI CTAG 6 cut(s) 51, 165, 1023, 1808, 1902, 2096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.