Prupe.3G188800_v2.0.a1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000975
Physical Location & Seq
Forward (+)
20218139 .. 20219696
1558 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G188800.1

Sequence Viewer

Length: 606 bp
ATGAGCTCCATAGAAGTACAAGGCAACAAGCCTCATGCTGTATGCATTCCCTTTCCACTTCAAAGCCATATAAAGGCAACGCTTAAATTTGCAGAGCTCCTCCACCATAGAGGTTTTCACATAAGCTTTGTTAACACAGAGTTCAATCACAAGCGCTTTCTTAAATCTCTAGGACTCAATTCCCTTGATGGCTTGCCTGATTTTCGGTTTGAAGCCATCCCAGATAGCCTTCCAGATTCAAATGAAGATACCACACAAGATGTCACTCTGCTTGCTGAGTCCGTAGGAAAAAATTTATTTGCTCCCTTTCATGCCCTCCTTGCAATACTCAACAATGATGCCATAGAAACATCCAGCAATCCTCCAGTGACTTGCATTGTTTCAGATGGTTTCATGTCCATGTTCACAATCACAGCTGCTGAAGAAATTGGAGCCCCTATAGTGCTGTTCTACACTATAGCTGCCTGCAGCTTCATGGGATTGAAACAACTTCGTGCTTTGGTCGAAAAAGGACTTGCACCACTCAAAGATGAGAGCTGTTTAACAAACGGCTATCTGGACACCGAAGACTTCAAATCAAGAAAAAAGATTCACTTTGCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

202

Amino Acids

22.16

Weight (kDa)

5.71

Isoelectric Point (pI)

49.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 86, 292
AcuI CTGAAG 1 cut(s) 441
AfaI GTAC 1 cut(s) 18
AfeI AGCGCT 1 cut(s) 155
AfiI CCNNNNNNNGG 1 cut(s) 73
AgsI TTSAA 6 cut(s) 62, 145, 212, 240, 484, 574
AluBI AGCT 7 cut(s) 6, 97, 126, 416, 461, 471, 537
AluI AGCT 7 cut(s) 6, 97, 126, 416, 461, 471, 537
Alw21I GWGCWC 2 cut(s) 8, 99
AlwNI CAGNNNCTG 1 cut(s) 419
Aor51HI AGCGCT 1 cut(s) 155
ApeKI GCWGC 3 cut(s) 416, 461, 468
ApoI RAATTY 2 cut(s) 86, 292
AspLEI GCGC 1 cut(s) 156
BanII GRGCYC 3 cut(s) 8, 99, 436
BbsI GAAGAC 1 cut(s) 573
Bbv12I GWGCWC 2 cut(s) 8, 99
BbvI GCAGC 3 cut(s) 403, 448, 480
BccI CCATC 3 cut(s) 182, 224, 380
BceAI ACGGC 1 cut(s) 565
BfaI CTAG 1 cut(s) 170
BfmI CTRYAG 3 cut(s) 438, 456, 466
BfoI RGCGCY 1 cut(s) 157
BisI GCNGC 3 cut(s) 417, 462, 469
BlsI GCNGC 3 cut(s) 418, 463, 470
BmiI GGNNCC 1 cut(s) 433
BmsI GCATC 1 cut(s) 328
BpiI GAAGAC 1 cut(s) 573
BpmI CTGGAG 1 cut(s) 348
Bsc4I CCNNNNNNNGG 1 cut(s) 73
Bse1I ACTGG 1 cut(s) 365
BseGI GGATG 2 cut(s) 216, 350
BseLI CCNNNNNNNGG 1 cut(s) 73
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 1 cut(s) 365
BseRI GAGGAG 1 cut(s) 89
BseXI GCAGC 3 cut(s) 403, 448, 480
BsiHKAI GWGCWC 2 cut(s) 8, 99
BslI CCNNNNNNNGG 1 cut(s) 73
BsmI GAATGC 1 cut(s) 45
Bsp1286I GDGCHC 3 cut(s) 8, 99, 436
BspCNI CTCAG 1 cut(s) 268
BspLI GGNNCC 1 cut(s) 433
BspMAI CTGCAG 1 cut(s) 470
BsrI ACTGG 1 cut(s) 365
BstC8I GCNNGC 3 cut(s) 194, 273, 466
BstDEI CTNAG 1 cut(s) 276
BstF5I GGATG 2 cut(s) 216, 350
BstH2I RGCGCY 1 cut(s) 157
BstHHI GCGC 1 cut(s) 156
BstMWI GCNNNNNNNGC 1 cut(s) 320
BstSFI CTRYAG 3 cut(s) 438, 456, 466
BstV1I GCAGC 3 cut(s) 403, 448, 480
BstV2I GAAGAC 1 cut(s) 573
BtsCI GGATG 2 cut(s) 216, 350
BtsIMutI CAGTG 1 cut(s) 372
Cac8I GCNNGC 3 cut(s) 194, 273, 466
CaiI CAGNNNCTG 1 cut(s) 419
CfoI GCGC 1 cut(s) 156
Csp6I GTAC 1 cut(s) 17
CviAII CATG 5 cut(s) 35, 311, 394, 400, 475
CviQI GTAC 1 cut(s) 17
DdeI CTNAG 1 cut(s) 276
Ecl136II GAGCTC 2 cut(s) 6, 97
Eco24I GRGCYC 3 cut(s) 8, 99, 436
Eco47III AGCGCT 1 cut(s) 155
Eco53kI GAGCTC 2 cut(s) 6, 97
Eco57I CTGAAG 1 cut(s) 441
EcoICRI GAGCTC 2 cut(s) 6, 97
EcoT22I ATGCAT 1 cut(s) 47
EcoT38I GRGCYC 3 cut(s) 8, 99, 436
FaeI CATG 5 cut(s) 38, 314, 397, 403, 478
FalI AAGNNNNNCTT 1 cut(s) 578
FatI CATG 5 cut(s) 34, 310, 393, 399, 474
Fnu4HI GCNGC 3 cut(s) 417, 462, 469
FokI GGATG 2 cut(s) 203, 337
FriOI GRGCYC 3 cut(s) 8, 99, 436
Fsp4HI GCNGC 3 cut(s) 417, 462, 469
FspBI CTAG 1 cut(s) 170
GlaI GCGC 1 cut(s) 155
GluI GCNGC 3 cut(s) 417, 462, 469
GsuI CTGGAG 1 cut(s) 348
HaeII RGCGCY 1 cut(s) 157
HhaI GCGC 1 cut(s) 156
Hin1II CATG 5 cut(s) 38, 314, 397, 403, 478
Hin6I GCGC 1 cut(s) 154
HinP1I GCGC 1 cut(s) 154
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HindIII AAGCTT 1 cut(s) 124
HinfI GANTC 4 cut(s) 174, 236, 278, 589
HpaI GTTAAC 1 cut(s) 133
Hpy166II GTNNAC 2 cut(s) 133, 405
Hpy188I TCNGA 1 cut(s) 385
Hpy188III TCNNGA 3 cut(s) 233, 557, 579
Hpy8I GTNNAC 2 cut(s) 133, 405
HpyAV CCTTC 1 cut(s) 239
HpyCH4V TGCA 6 cut(s) 45, 92, 323, 375, 468, 518
HpyF10VI GCNNNNNNNGC 1 cut(s) 320
HpyF3I CTNAG 1 cut(s) 276
Hsp92II CATG 5 cut(s) 38, 314, 397, 403, 478
HspAI GCGC 1 cut(s) 154
KspAI GTTAAC 1 cut(s) 133
LmnI GCTCC 4 cut(s) 11, 102, 307, 431
LpnPI CCDG 7 cut(s) 210, 234, 246, 367, 378, 478, 542
Lsp1109I GCAGC 3 cut(s) 403, 448, 480
LweI GCATC 1 cut(s) 328
MaeI CTAG 1 cut(s) 170
MaeIII GTNAC 2 cut(s) 262, 367
MboII GAAGA 3 cut(s) 257, 434, 578
MhlI GDGCHC 3 cut(s) 8, 99, 436
MluCI AATT 4 cut(s) 86, 178, 292, 426
MlyI GAGTC 2 cut(s) 168, 287
MnlI CCTC 5 cut(s) 42, 104, 110, 326, 372
Mph1103I ATGCAT 1 cut(s) 47
MseI TTAA 5 cut(s) 84, 132, 162, 542, 604
MslI CAYNNNNRTG 1 cut(s) 398
MspA1I CMGCKG 1 cut(s) 416
Mva1269I GAATGC 1 cut(s) 45
MwoI GCNNNNNNNGC 1 cut(s) 320
NlaIII CATG 5 cut(s) 38, 314, 397, 403, 478
NlaIV GGNNCC 1 cut(s) 433
NmuCI GTSAC 2 cut(s) 262, 367
NsiI ATGCAT 1 cut(s) 47
PctI GAATGC 1 cut(s) 45
PfeI GAWTC 2 cut(s) 236, 589
PkrI GCNGC 3 cut(s) 418, 463, 470
PleI GAGTC 2 cut(s) 168, 286
PpsI GAGTC 2 cut(s) 168, 286
Psp124BI GAGCTC 2 cut(s) 8, 99
PspN4I GGNNCC 1 cut(s) 433
PstI CTGCAG 1 cut(s) 470
PstNI CAGNNNCTG 1 cut(s) 419
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 1 cut(s) 18
RsaNI GTAC 1 cut(s) 17
RseI CAYNNNNRTG 1 cut(s) 398
SacI GAGCTC 2 cut(s) 8, 99
SaqAI TTAA 5 cut(s) 84, 132, 162, 542, 604
SatI GCNGC 3 cut(s) 417, 462, 469
SchI GAGTC 2 cut(s) 168, 287
SduI GDGCHC 3 cut(s) 8, 99, 436
SetI ASST 8 cut(s) 8, 99, 115, 128, 418, 463, 473, 539
SfaNI GCATC 1 cut(s) 328
SfcI CTRYAG 3 cut(s) 438, 456, 466
SmiMI CAYNNNNRTG 1 cut(s) 398
Sse9I AATT 4 cut(s) 86, 178, 292, 426
SspMI CTAG 1 cut(s) 170
SstI GAGCTC 2 cut(s) 8, 99
TaqI TCGA 1 cut(s) 504
TasI AATT 4 cut(s) 86, 178, 292, 426
TatI WGTACW 1 cut(s) 16
TfiI GAWTC 2 cut(s) 236, 589
Tru1I TTAA 5 cut(s) 84, 132, 162, 542, 604
Tru9I TTAA 5 cut(s) 84, 132, 162, 542, 604
TscAI CASTG 1 cut(s) 372
TseFI GTSAC 2 cut(s) 262, 367
TseI GCWGC 3 cut(s) 416, 461, 468
Tsp45I GTSAC 2 cut(s) 262, 367
TspDTI ATGAA 4 cut(s) 258, 299, 382, 463
TspGWI ACGGA 1 cut(s) 271
TspRI CASTG 1 cut(s) 372
XapI RAATTY 2 cut(s) 86, 292
XspI CTAG 1 cut(s) 170
Zsp2I ATGCAT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.