Rh5BG203400

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
22976081 .. 22976641
561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG203400.1

Sequence Viewer

Length: 561 bp
ATGGCTTCCGCTCATCATCATAAGCCTCATGCTGTTTGTATTCCACTTCCAGCTCAAAGCCACATAAAGGCTATGCTTAAATTAACCAAAATCCTCCACCACATAGGCTTTCATATTACCTTTGTCAACACAGAATTCAACCACAAGCGATTTCTTAAGTCTCGTGGACCCAACTCCCTCGCTGGCTTACCTGATTTTCACTTTGAAGCCATCCCTGATGGCATTCCAGAATCAGGTGAAGATGCCACCCAAGACGGCAATTTGATTTTTGACTCCGTCAGAAATCATCTCTTGGCTCCATTTCGTGACCTCCTAATAAAACTAAACGCTACTAGTCCTCCAGTGACTTGCATTGTTTCAGATGGTTTCATGTCCGCTTTTACTATAACAGCGGCAGAAGAACTTGGAATCCCTATTGCATTGTTCTACACTATTTCTGCTTGCAGCTTCATGGGATTCAGGAAATTCCGTACTTTGCTTGAGAAAGGGCTTGCACCACTTAAAGGTACTAAAATGATGATTGAAGGATTAGTTTCAATTTTATGGTTATTAACTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

186

Amino Acids

20.58

Weight (kDa)

8.48

Isoelectric Point (pI)

47.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 11
AciI CCGC 3 cut(s) 9, 375, 392
AcsI RAATTY 2 cut(s) 134, 464
AfaI GTAC 2 cut(s) 472, 508
AfiI CCNNNNNNNGG 3 cut(s) 67, 233, 503
AflII CTTAAG 1 cut(s) 155
AgsI TTSAA 4 cut(s) 139, 206, 524, 537
AhlI ACTAGT 1 cut(s) 332
AloI GAACNNNNNNTCC 2 cut(s) 393, 425
AluBI AGCT 2 cut(s) 53, 447
AluI AGCT 2 cut(s) 53, 447
Alw26I GTCTC 1 cut(s) 165
ApeKI GCWGC 1 cut(s) 444
ApoI RAATTY 2 cut(s) 134, 464
AspS9I GGNCC 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 248
AvaII GGWCC 1 cut(s) 167
BauI CACGAG 1 cut(s) 162
BbvI GCAGC 1 cut(s) 456
BccI CCATC 3 cut(s) 212, 218, 356
BceAI ACGGC 1 cut(s) 271
BcoDI GTCTC 1 cut(s) 165
BcuI ACTAGT 1 cut(s) 332
BfaI CTAG 1 cut(s) 333
BfrI CTTAAG 1 cut(s) 155
BisI GCNGC 2 cut(s) 393, 445
BlsI GCNGC 2 cut(s) 394, 446
Bme18I GGWCC 1 cut(s) 167
BmgT120I GGNCC 1 cut(s) 167
BmiI GGNNCC 2 cut(s) 169, 297
BmsI GCATC 1 cut(s) 232
BpmI CTGGAG 1 cut(s) 324
BpuEI CTTGAG 1 cut(s) 500
BsaXI ACNNNNNCTCC 2 cut(s) 322, 352
Bsc4I CCNNNNNNNGG 3 cut(s) 67, 233, 503
Bse1I ACTGG 1 cut(s) 341
BseGI GGATG 1 cut(s) 210
BseLI CCNNNNNNNGG 3 cut(s) 67, 233, 503
BseNI ACTGG 1 cut(s) 341
BseXI GCAGC 1 cut(s) 456
BslI CCNNNNNNNGG 3 cut(s) 67, 233, 503
BsmAI GTCTC 1 cut(s) 165
BsmI GAATGC 1 cut(s) 222
BspACI CCGC 3 cut(s) 9, 375, 392
BspLI GGNNCC 2 cut(s) 169, 297
BspTI CTTAAG 1 cut(s) 155
BsrBI CCGCTC 1 cut(s) 11
BsrI ACTGG 1 cut(s) 341
BssSI CACGAG 1 cut(s) 162
Bst2BI CACGAG 1 cut(s) 162
BstAFI CTTAAG 1 cut(s) 155
BstC8I GCNNGC 3 cut(s) 184, 442, 492
BstF5I GGATG 1 cut(s) 210
BstMAI GTCTC 1 cut(s) 165
BstV1I GCAGC 1 cut(s) 456
BtsCI GGATG 1 cut(s) 210
BtsIMutI CAGTG 1 cut(s) 348
Cac8I GCNNGC 3 cut(s) 184, 442, 492
Cfr13I GGNCC 1 cut(s) 167
Csp6I GTAC 2 cut(s) 471, 507
CviAII CATG 3 cut(s) 29, 370, 451
CviQI GTAC 2 cut(s) 471, 507
Eco47I GGWCC 1 cut(s) 167
EcoRI GAATTC 1 cut(s) 134
FaeI CATG 3 cut(s) 32, 373, 454
FatI CATG 3 cut(s) 28, 369, 450
Fnu4HI GCNGC 2 cut(s) 393, 445
FokI GGATG 1 cut(s) 197
Fsp4HI GCNGC 2 cut(s) 393, 445
FspBI CTAG 1 cut(s) 333
GluI GCNGC 2 cut(s) 393, 445
GsuI CTGGAG 1 cut(s) 324
Hin1II CATG 3 cut(s) 32, 373, 454
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HinfI GANTC 4 cut(s) 230, 272, 408, 456
HphI GGTGA 1 cut(s) 248
Hpy166II GTNNAC 2 cut(s) 127, 167
Hpy188I TCNGA 2 cut(s) 281, 361
Hpy188III TCNNGA 3 cut(s) 227, 305, 460
Hpy8I GTNNAC 2 cut(s) 127, 167
HpyAV CCTTC 1 cut(s) 518
HpyCH4V TGCA 4 cut(s) 351, 419, 444, 494
Hsp92II CATG 3 cut(s) 32, 373, 454
LmnI GCTCC 1 cut(s) 301
LpnPI CCDG 8 cut(s) 63, 168, 204, 219, 228, 240, 354, 445
Lsp1109I GCAGC 1 cut(s) 456
LweI GCATC 1 cut(s) 232
MaeI CTAG 1 cut(s) 333
MaeIII GTNAC 2 cut(s) 305, 343
MbiI CCGCTC 1 cut(s) 11
MboII GAAGA 2 cut(s) 251, 410
MluCI AATT 5 cut(s) 80, 134, 259, 464, 537
MlyI GAGTC 1 cut(s) 266
MnlI CCTC 5 cut(s) 36, 104, 188, 320, 348
MseI TTAA 6 cut(s) 78, 83, 156, 501, 551, 559
MspA1I CMGCKG 1 cut(s) 392
MspCI CTTAAG 1 cut(s) 155
Mva1269I GAATGC 1 cut(s) 222
NlaIII CATG 3 cut(s) 32, 373, 454
NlaIV GGNNCC 2 cut(s) 169, 297
NmuCI GTSAC 2 cut(s) 305, 343
PctI GAATGC 1 cut(s) 222
PfeI GAWTC 3 cut(s) 230, 408, 456
PflFI GACNNNGTC 1 cut(s) 275
PkrI GCNGC 2 cut(s) 394, 446
PleI GAGTC 1 cut(s) 266
PpsI GAGTC 1 cut(s) 266
PspN4I GGNNCC 2 cut(s) 169, 297
PspPI GGNCC 1 cut(s) 167
PsyI GACNNNGTC 1 cut(s) 275
RsaI GTAC 2 cut(s) 472, 508
RsaNI GTAC 2 cut(s) 471, 507
SaqAI TTAA 6 cut(s) 78, 83, 156, 501, 551, 559
SatI GCNGC 2 cut(s) 393, 445
Sau96I GGNCC 1 cut(s) 167
SchI GAGTC 1 cut(s) 266
SetI ASST 7 cut(s) 55, 122, 193, 238, 312, 449, 508
SfaNI GCATC 1 cut(s) 232
SinI GGWCC 1 cut(s) 167
SmlI CTYRAG 2 cut(s) 155, 479
SmoI CTYRAG 2 cut(s) 155, 479
SpeI ACTAGT 1 cut(s) 332
Sse9I AATT 5 cut(s) 80, 134, 259, 464, 537
SsiI CCGC 3 cut(s) 9, 375, 392
SspMI CTAG 1 cut(s) 333
TasI AATT 5 cut(s) 80, 134, 259, 464, 537
TauI GCSGC 1 cut(s) 395
TfiI GAWTC 3 cut(s) 230, 408, 456
Tru1I TTAA 6 cut(s) 78, 83, 156, 501, 551, 559
Tru9I TTAA 6 cut(s) 78, 83, 156, 501, 551, 559
TscAI CASTG 1 cut(s) 348
TseFI GTSAC 2 cut(s) 305, 343
TseI GCWGC 1 cut(s) 444
Tsp45I GTSAC 2 cut(s) 305, 343
TspDTI ATGAA 3 cut(s) 101, 358, 439
TspGWI ACGGA 2 cut(s) 265, 458
TspRI CASTG 1 cut(s) 348
Tth111I GACNNNGTC 1 cut(s) 275
Vha464I CTTAAG 1 cut(s) 155
VpaK11BI GGWCC 1 cut(s) 167
XapI RAATTY 2 cut(s) 134, 464
XspI CTAG 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.