Rh5BG202900

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
22920626 .. 22925180
4555 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG202900.1

Sequence Viewer

Length: 858 bp
ATGGTTTACACTTTCCCTTCTAGTTCCACTGGAAGCACAAAGCCTCATGCTGTTTGTACTAATGTTGCTTCCCAAAGTCACATTAAGGCGATGCTCAAACTAGCCAAAATCCTTCACCATAGAGGTTTTCACATTACCTTCGTCAACACAGAATCCTACCACAAGCGTTTTCTTGAATCTCAAGGACCCAATTCCCTCAATGGCTTACCTGATTTTCGCTTTGAAACCCTTCCAGATTCAGATAAAAGTGCCCCCAGAAATCATCTGTTGGCTCCATTTCGTGACCTGTTGATGAAACTCAATAACACTACTCCTCCAGTGACTTGCATTGTTTCGAATGGCTTCATGTCCACATTCACAATCACTGCTGCAGATGAACTAGATATTCCTATTGCATTGTTCTACAGTTTTGCTGCTTGCAGCTTCATGGGATTAAAGCAATTCCGCACTTTGCGGGAAAAAGGCCTTGCACCACTTAAAGATGAGAGCTGTTTGACAAATGGATTTTTAGACAAAGTTATAGAATGGATTCCAGGAATGAAGGACATCTGTTTAAAACATCTTCCAACCTTCTTTAGGACCACAAATCCTGATGACACCTTGTTCAACATCTGCATGGAAACAACAGAAGCAGCGGATAGAGCTTCAGCAGTTGTTCTTCTCACTTTTGACGCTTTGGAAAAAGATGTTTTAGAAGCTCTCTCCTCTTCTTTGTCTCCACCTGGAGAGAAGTGTAAGAAAATGAAAAGCAAGGTCTTGGAGTGGAAGAAACTTGCGGAAGAAGCAACTGCTCCACATGGTTCTTCATCAATAAATTTAGACAATCTAGTGAATCAAGTGCTATTGAGACAACGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

285

Amino Acids

31.73

Weight (kDa)

8.12

Isoelectric Point (pI)

42.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 445, 454, 635, 776
AcsI RAATTY 1 cut(s) 814
AcuI CTGAAG 1 cut(s) 630
AfaI GTAC 1 cut(s) 58
AfiI CCNNNNNNNGG 1 cut(s) 576
AgsI TTSAA 3 cut(s) 176, 224, 607
AjnI CCWGG 2 cut(s) 532, 721
AluBI AGCT 4 cut(s) 423, 489, 644, 698
AluI AGCT 4 cut(s) 423, 489, 644, 698
Alw26I GTCTC 2 cut(s) 720, 841
AoxI GGCC 1 cut(s) 463
ApeKI GCWGC 4 cut(s) 368, 413, 420, 632
ApoI RAATTY 1 cut(s) 814
Asp700I GAANNNNTTC 3 cut(s) 228, 341, 528
AspS9I GGNCC 2 cut(s) 185, 579
AsuHPI GGTGA 1 cut(s) 107
AsuII TTCGAA 1 cut(s) 335
AvaII GGWCC 2 cut(s) 185, 579
BaeGI GKGCMC 1 cut(s) 253
BbvI GCAGC 4 cut(s) 355, 400, 432, 644
BciT130I CCWGG 2 cut(s) 534, 723
BcoDI GTCTC 2 cut(s) 720, 841
BfaI CTAG 5 cut(s) 21, 101, 380, 827, 856
BfmI CTRYAG 2 cut(s) 369, 403
BisI GCNGC 4 cut(s) 369, 414, 421, 633
BlsI GCNGC 4 cut(s) 370, 415, 422, 634
Bme1390I CCNGG 2 cut(s) 534, 723
Bme18I GGWCC 2 cut(s) 185, 579
BmgT120I GGNCC 2 cut(s) 185, 579
BmiI GGNNCC 2 cut(s) 187, 273
BmrFI CCNGG 2 cut(s) 534, 723
BmsI GCATC 1 cut(s) 81
BpmI CTGGAG 2 cut(s) 300, 744
Bpu14I TTCGAA 1 cut(s) 335
BpuEI CTTGAG 1 cut(s) 165
BsaXI ACNNNNNCTCC 2 cut(s) 298, 328
Bsc4I CCNNNNNNNGG 1 cut(s) 576
Bse1I ACTGG 2 cut(s) 34, 317
BseBI CCWGG 2 cut(s) 534, 723
BseLI CCNNNNNNNGG 1 cut(s) 576
BseNI ACTGG 2 cut(s) 34, 317
BseRI GAGGAG 2 cut(s) 303, 694
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 4 cut(s) 355, 400, 432, 644
BshFI GGCC 1 cut(s) 465
BslI CCNNNNNNNGG 1 cut(s) 576
BsmAI GTCTC 2 cut(s) 720, 841
BsnI GGCC 1 cut(s) 465
Bsp119I TTCGAA 1 cut(s) 335
Bsp1286I GDGCHC 1 cut(s) 253
BspACI CCGC 4 cut(s) 445, 454, 635, 776
BspANI GGCC 1 cut(s) 465
BspLI GGNNCC 2 cut(s) 187, 273
BspMAI CTGCAG 1 cut(s) 373
BspT104I TTCGAA 1 cut(s) 335
BsrI ACTGG 2 cut(s) 34, 317
Bst2UI CCWGG 2 cut(s) 534, 723
Bst4CI ACNGT 1 cut(s) 407
Bst6I CTCTTC 1 cut(s) 712
BstBI TTCGAA 1 cut(s) 335
BstC8I GCNNGC 1 cut(s) 418
BstENI CCTNNNNNAGG 1 cut(s) 574
BstMAI GTCTC 2 cut(s) 720, 841
BstMWI GCNNNNNNNGC 2 cut(s) 641, 782
BstNI CCWGG 2 cut(s) 534, 723
BstSCI CCNGG 2 cut(s) 532, 721
BstSFI CTRYAG 2 cut(s) 369, 403
BstSLI GKGCMC 1 cut(s) 253
BstV1I GCAGC 4 cut(s) 355, 400, 432, 644
BsuRI GGCC 1 cut(s) 465
BtgZI GCGATG 1 cut(s) 104
BtsI GCAGTG 1 cut(s) 363
BtsIMutI CAGTG 3 cut(s) 27, 324, 363
Cac8I GCNNGC 1 cut(s) 418
Cfr13I GGNCC 2 cut(s) 185, 579
CseI GACGC 1 cut(s) 680
Csp6I GTAC 1 cut(s) 57
CviAII CATG 5 cut(s) 47, 346, 427, 616, 797
CviQI GTAC 1 cut(s) 57
DraI TTTAAA 1 cut(s) 555
Eam1104I CTCTTC 1 cut(s) 712
EarI CTCTTC 1 cut(s) 712
Eco147I AGGCCT 1 cut(s) 465
Eco47I GGWCC 2 cut(s) 185, 579
Eco57I CTGAAG 1 cut(s) 630
EcoNI CCTNNNNNAGG 1 cut(s) 574
EcoO109I RGGNCCY 1 cut(s) 185
EcoRII CCWGG 2 cut(s) 532, 721
FaeI CATG 5 cut(s) 50, 349, 430, 619, 800
FaiI YATR 7 cut(s) 48, 120, 347, 428, 521, 617, 798
FatI CATG 5 cut(s) 46, 345, 426, 615, 796
FauI CCCGC 1 cut(s) 447
Fnu4HI GCNGC 4 cut(s) 369, 414, 421, 633
Fsp4HI GCNGC 4 cut(s) 369, 414, 421, 633
FspBI CTAG 5 cut(s) 21, 101, 380, 827, 856
GluI GCNGC 4 cut(s) 369, 414, 421, 633
GsuI CTGGAG 2 cut(s) 300, 744
HaeIII GGCC 1 cut(s) 465
HgaI GACGC 1 cut(s) 680
Hin1II CATG 5 cut(s) 50, 349, 430, 619, 800
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HinfI GANTC 5 cut(s) 152, 176, 236, 529, 832
HphI GGTGA 1 cut(s) 107
Hpy166II GTNNAC 3 cut(s) 7, 145, 351
Hpy188I TCNGA 1 cut(s) 241
Hpy188III TCNNGA 4 cut(s) 173, 233, 281, 590
Hpy8I GTNNAC 3 cut(s) 7, 145, 351
HpyAV CCTTC 6 cut(s) 27, 122, 148, 239, 535, 580
HpyCH4III ACNGT 1 cut(s) 407
HpyCH4V TGCA 6 cut(s) 327, 371, 395, 420, 470, 615
HpyF10VI GCNNNNNNNGC 2 cut(s) 641, 782
Hsp92II CATG 5 cut(s) 50, 349, 430, 619, 800
LmnI GCTCC 2 cut(s) 277, 796
Lsp1109I GCAGC 4 cut(s) 355, 400, 432, 644
LweI GCATC 1 cut(s) 81
MaeI CTAG 5 cut(s) 21, 101, 380, 827, 856
MaeIII GTNAC 3 cut(s) 77, 281, 319
MboII GAAGA 6 cut(s) 554, 650, 699, 778, 791, 795
MhlI GDGCHC 1 cut(s) 253
MluCI AATT 3 cut(s) 190, 440, 814
MmeI TCCRAC 1 cut(s) 590
MnlI CCTC 5 cut(s) 54, 116, 206, 324, 715
MroXI GAANNNNTTC 3 cut(s) 228, 341, 528
MseI TTAA 4 cut(s) 84, 434, 477, 554
MslI CAYNNNNRTG 1 cut(s) 614
MspA1I CMGCKG 1 cut(s) 635
MspR9I CCNGG 2 cut(s) 534, 723
MvaI CCWGG 2 cut(s) 534, 723
MwoI GCNNNNNNNGC 2 cut(s) 641, 782
NlaIII CATG 5 cut(s) 50, 349, 430, 619, 800
NlaIV GGNNCC 2 cut(s) 187, 273
NmuCI GTSAC 3 cut(s) 77, 281, 319
NspV TTCGAA 1 cut(s) 335
PceI AGGCCT 1 cut(s) 465
PdmI GAANNNNTTC 3 cut(s) 228, 341, 528
PfeI GAWTC 5 cut(s) 152, 176, 236, 529, 832
PfoI TCCNGGA 1 cut(s) 532
PkrI GCNGC 4 cut(s) 370, 415, 422, 634
PpuMI RGGWCCY 1 cut(s) 185
Psp5II RGGWCCY 1 cut(s) 185
Psp6I CCWGG 2 cut(s) 532, 721
PspGI CCWGG 2 cut(s) 532, 721
PspN4I GGNNCC 2 cut(s) 187, 273
PspPI GGNCC 2 cut(s) 185, 579
PspPPI RGGWCCY 1 cut(s) 185
PstI CTGCAG 1 cut(s) 373
RsaI GTAC 1 cut(s) 58
RsaNI GTAC 1 cut(s) 57
RseI CAYNNNNRTG 1 cut(s) 614
SaqAI TTAA 4 cut(s) 84, 434, 477, 554
SatI GCNGC 4 cut(s) 369, 414, 421, 633
Sau96I GGNCC 2 cut(s) 185, 579
ScrFI CCNGG 2 cut(s) 534, 723
SduI GDGCHC 1 cut(s) 253
SfaNI GCATC 1 cut(s) 81
SfcI CTRYAG 2 cut(s) 369, 403
SfuI TTCGAA 1 cut(s) 335
SinI GGWCC 2 cut(s) 185, 579
SmiMI CAYNNNNRTG 1 cut(s) 614
SmlI CTYRAG 1 cut(s) 180
SmoI CTYRAG 1 cut(s) 180
Sse9I AATT 3 cut(s) 190, 440, 814
SseBI AGGCCT 1 cut(s) 465
SsiI CCGC 4 cut(s) 445, 454, 635, 776
SspMI CTAG 5 cut(s) 21, 101, 380, 827, 856
StuI AGGCCT 1 cut(s) 465
StyD4I CCNGG 2 cut(s) 532, 721
TaaI ACNGT 1 cut(s) 407
TaqI TCGA 1 cut(s) 335
TasI AATT 3 cut(s) 190, 440, 814
TatI WGTACW 1 cut(s) 56
TfiI GAWTC 5 cut(s) 152, 176, 236, 529, 832
Tru1I TTAA 4 cut(s) 84, 434, 477, 554
Tru9I TTAA 4 cut(s) 84, 434, 477, 554
TscAI CASTG 3 cut(s) 34, 324, 370
TseFI GTSAC 3 cut(s) 77, 281, 319
TseI GCWGC 4 cut(s) 368, 413, 420, 632
Tsp45I GTSAC 3 cut(s) 77, 281, 319
TspDTI ATGAA 7 cut(s) 308, 334, 390, 415, 554, 758, 795
TspRI CASTG 3 cut(s) 34, 324, 370
VpaK11BI GGWCC 2 cut(s) 185, 579
XagI CCTNNNNNAGG 1 cut(s) 574
XapI RAATTY 1 cut(s) 814
XmnI GAANNNNTTC 3 cut(s) 228, 341, 528
XspI CTAG 5 cut(s) 21, 101, 380, 827, 856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.