pycom09g06270

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0000975
Physical Location & Seq
Forward (+)
4643333 .. 4644301
969 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g06270.2

Sequence Viewer

Length: 771 bp
ATGATGAATCAGATTCAACTTGACAAACAAGAAATAACGTACAGGGAGGGAAAGGGCCGTATTTCAACTTTTCTCAGGAGCACTATAAATAGTCTGCATTTGTGCAAGCAATGCAATGCAAACACAAAACCTCAAATGGATCCCACAGCAGTAGCTGCTAAGCCTCATGCTGTTTGCATTCCGGCTCCAGCTCAAGGCCATATCAAGGCAATGCTTAAATTTGCAAAGCTCCTCCACCATAGAGGTTTTCATATTACCTTTGTCAACACTGAGTACAACCACAAGCGCTTTCTAAAATCTCTGGGCCCCAATTCCCTTGATGGCTCACCTGATTTCCAGTTTGCAGCCATACCAGACGGCCTTCCAGATTCAGATGAACGTGCCACCCAAGATGTCCCATTGCTTTGTGATTCAATCAGAAAACAAAAATTATTGGCTCCCTTTCGTGAACTACTAATGAATCTCAACAGTGATGCCATATCAACATCCATTAATCCTCCAGTAACTTGCATAGTTTCAGATGGTTTGATGTCCCCGTTCACAATCACAGCCGCTGATGAGATTGAAGTCCCCATAGTGCTGTTCTACACTATTGCGGCATGCAGCTTCATGGGAGTTATACAATTTCGTGCCTTGATGGAAAAAGGCCTGGCACCACTCAAAGGGATATCTGGAAAAGGTTATAGATTGGATTCCAGGAATGAAAGATATCCGTTTAAGGGAGCTCCCAACCTTTATTCGGACTTCAGATCCCGACGATATCATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

257

Amino Acids

28.58

Weight (kDa)

9.22

Isoelectric Point (pI)

41.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 652
AciI CCGC 2 cut(s) 552, 596
AclWI GGATC 3 cut(s) 134, 147, 744
AcsI RAATTY 1 cut(s) 218
AcuI CTGAAG 1 cut(s) 730
AfaI GTAC 2 cut(s) 41, 275
AfeI AGCGCT 1 cut(s) 287
AfiI CCNNNNNNNGG 5 cut(s) 194, 205, 662, 719, 739
AgsI TTSAA 4 cut(s) 17, 66, 414, 566
AjnI CCWGG 2 cut(s) 648, 695
AluBI AGCT 5 cut(s) 155, 191, 229, 606, 725
AluI AGCT 5 cut(s) 155, 191, 229, 606, 725
Alw21I GWGCWC 2 cut(s) 83, 727
AlwI GGATC 3 cut(s) 134, 147, 744
AlwNI CAGNNNCTG 2 cut(s) 155, 554
Aor51HI AGCGCT 1 cut(s) 287
AoxI GGCC 5 cut(s) 55, 196, 304, 358, 646
ApaI GGGCCC 1 cut(s) 308
ApeKI GCWGC 3 cut(s) 155, 344, 603
ApoI RAATTY 1 cut(s) 218
AseI ATTAAT 1 cut(s) 492
AspLEI GCGC 1 cut(s) 288
AspS9I GGNCC 3 cut(s) 55, 304, 305
AsuHPI GGTGA 1 cut(s) 318
BaeGI GKGCMC 1 cut(s) 308
BamHI GGATCC 1 cut(s) 139
BanI GGYRCC 1 cut(s) 652
BanII GRGCYC 2 cut(s) 308, 727
Bbv12I GWGCWC 2 cut(s) 83, 727
BbvI GCAGC 3 cut(s) 142, 356, 615
BccI CCATC 3 cut(s) 314, 515, 631
BceAI ACGGC 2 cut(s) 42, 373
BciT130I CCWGG 2 cut(s) 650, 697
BfoI RGCGCY 1 cut(s) 289
BisI GCNGC 5 cut(s) 156, 345, 552, 597, 604
BlpI GCTNAGC 1 cut(s) 159
BlsI GCNGC 5 cut(s) 157, 346, 553, 598, 605
Bme1390I CCNGG 2 cut(s) 650, 697
BmgT120I GGNCC 3 cut(s) 55, 304, 305
BmiI GGNNCC 6 cut(s) 141, 186, 306, 307, 438, 654
BmrFI CCNGG 2 cut(s) 650, 697
BmsI GCATC 1 cut(s) 463
BpmI CTGGAG 2 cut(s) 171, 483
Bpu1102I GCTNAGC 1 cut(s) 159
BpuEI CTTGAG 1 cut(s) 177
Bsc4I CCNNNNNNNGG 5 cut(s) 194, 205, 662, 719, 739
Bse1I ACTGG 2 cut(s) 337, 500
Bse3DI GCAATG 4 cut(s) 116, 121, 216, 398
BseBI CCWGG 2 cut(s) 650, 697
BseGI GGATG 1 cut(s) 485
BseLI CCNNNNNNNGG 5 cut(s) 194, 205, 662, 719, 739
BseMI GCAATG 4 cut(s) 116, 121, 216, 398
BseMII CTCAG 2 cut(s) 88, 261
BseNI ACTGG 2 cut(s) 337, 500
BseRI GAGGAG 1 cut(s) 221
BseSI GKGCMC 1 cut(s) 308
BseXI GCAGC 3 cut(s) 142, 356, 615
BshFI GGCC 5 cut(s) 57, 198, 306, 360, 648
BshNI GGYRCC 1 cut(s) 652
BsiHKAI GWGCWC 2 cut(s) 83, 727
BsiSI CCGG 1 cut(s) 182
BslFI GGGAC 3 cut(s) 380, 517, 554
BslI CCNNNNNNNGG 5 cut(s) 194, 205, 662, 719, 739
BsmFI GGGAC 3 cut(s) 380, 517, 554
BsmI GAATGC 1 cut(s) 177
BsnI GGCC 5 cut(s) 57, 198, 306, 360, 648
Bsp120I GGGCCC 1 cut(s) 304
Bsp1286I GDGCHC 3 cut(s) 83, 308, 727
Bsp143I GATC 2 cut(s) 139, 749
Bsp1720I GCTNAGC 1 cut(s) 159
BspACI CCGC 2 cut(s) 552, 596
BspANI GGCC 5 cut(s) 57, 198, 306, 360, 648
BspCNI CTCAG 2 cut(s) 87, 262
BspLI GGNNCC 6 cut(s) 141, 186, 306, 307, 438, 654
BspPI GGATC 3 cut(s) 134, 147, 744
BspT107I GGYRCC 1 cut(s) 652
BsrDI GCAATG 4 cut(s) 116, 121, 216, 398
BsrI ACTGG 2 cut(s) 337, 500
BssMI GATC 2 cut(s) 139, 749
Bst2UI CCWGG 2 cut(s) 650, 697
Bst4CI ACNGT 1 cut(s) 470
BstAPI GCANNNNNTGC 2 cut(s) 111, 155
BstC8I GCNNGC 2 cut(s) 107, 601
BstDEI CTNAG 3 cut(s) 74, 159, 270
BstF5I GGATG 1 cut(s) 485
BstH2I RGCGCY 1 cut(s) 289
BstHHI GCGC 1 cut(s) 288
BstKTI GATC 2 cut(s) 142, 752
BstMBI GATC 2 cut(s) 139, 749
BstMWI GCNNNNNNNGC 2 cut(s) 111, 155
BstNI CCWGG 2 cut(s) 650, 697
BstNSI RCATGY 1 cut(s) 603
BstSCI CCNGG 2 cut(s) 648, 695
BstSLI GKGCMC 1 cut(s) 308
BstV1I GCAGC 3 cut(s) 142, 356, 615
BstX2I RGATCY 2 cut(s) 139, 749
BstYI RGATCY 2 cut(s) 139, 749
BsuRI GGCC 5 cut(s) 57, 198, 306, 360, 648
BtsCI GGATG 1 cut(s) 485
BtsIMutI CAGTG 2 cut(s) 267, 475
Cac8I GCNNGC 2 cut(s) 107, 601
CaiI CAGNNNCTG 2 cut(s) 155, 554
CfoI GCGC 1 cut(s) 288
Cfr13I GGNCC 3 cut(s) 55, 304, 305
Csp6I GTAC 2 cut(s) 40, 274
CviAII CATG 4 cut(s) 167, 600, 610, 764
CviQI GTAC 2 cut(s) 40, 274
DdeI CTNAG 3 cut(s) 74, 159, 270
DpnI GATC 2 cut(s) 141, 751
DpnII GATC 2 cut(s) 139, 749
Ecl136II GAGCTC 1 cut(s) 725
Eco147I AGGCCT 1 cut(s) 648
Eco24I GRGCYC 2 cut(s) 308, 727
Eco32I GATATC 3 cut(s) 669, 710, 761
Eco47III AGCGCT 1 cut(s) 287
Eco53kI GAGCTC 1 cut(s) 725
Eco57I CTGAAG 1 cut(s) 730
EcoICRI GAGCTC 1 cut(s) 725
EcoO109I RGGNCCY 1 cut(s) 305
EcoRII CCWGG 2 cut(s) 648, 695
EcoRV GATATC 3 cut(s) 669, 710, 761
EcoT38I GRGCYC 2 cut(s) 308, 727
FaeI CATG 4 cut(s) 170, 603, 613, 767
FaqI GGGAC 3 cut(s) 380, 517, 554
FatI CATG 4 cut(s) 166, 599, 609, 763
Fnu4HI GCNGC 5 cut(s) 156, 345, 552, 597, 604
FokI GGATG 1 cut(s) 472
FriOI GRGCYC 2 cut(s) 308, 727
Fsp4HI GCNGC 5 cut(s) 156, 345, 552, 597, 604
GlaI GCGC 1 cut(s) 287
GluI GCNGC 5 cut(s) 156, 345, 552, 597, 604
GsuI CTGGAG 2 cut(s) 171, 483
HaeII RGCGCY 1 cut(s) 289
HaeIII GGCC 5 cut(s) 57, 198, 306, 360, 648
HapII CCGG 1 cut(s) 182
HhaI GCGC 1 cut(s) 288
Hin1II CATG 4 cut(s) 170, 603, 613, 767
Hin6I GCGC 1 cut(s) 286
HinP1I GCGC 1 cut(s) 286
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HinfI GANTC 6 cut(s) 7, 13, 368, 410, 460, 692
HpaII CCGG 1 cut(s) 182
HphI GGTGA 1 cut(s) 318
Hpy166II GTNNAC 3 cut(s) 265, 449, 540
Hpy188I TCNGA 6 cut(s) 12, 373, 419, 520, 742, 749
Hpy188III TCNNGA 5 cut(s) 76, 365, 446, 672, 753
Hpy8I GTNNAC 3 cut(s) 265, 449, 540
Hpy99I CGWCG 1 cut(s) 759
HpyAV CCTTC 1 cut(s) 371
HpyCH4III ACNGT 1 cut(s) 470
HpyCH4IV ACGT 2 cut(s) 38, 379
HpyCH4V TGCA 9 cut(s) 97, 105, 114, 119, 177, 224, 344, 510, 603
HpyF10VI GCNNNNNNNGC 2 cut(s) 111, 155
HpyF3I CTNAG 3 cut(s) 74, 159, 270
HpySE526I ACGT 2 cut(s) 38, 379
Hsp92II CATG 4 cut(s) 170, 603, 613, 767
HspAI GCGC 1 cut(s) 286
Kzo9I GATC 2 cut(s) 139, 749
LmnI GCTCC 6 cut(s) 78, 190, 234, 442, 722, 730
Lsp1109I GCAGC 3 cut(s) 142, 356, 615
LweI GCATC 1 cut(s) 463
MaeII ACGT 2 cut(s) 38, 379
MaeIII GTNAC 1 cut(s) 502
MalI GATC 2 cut(s) 141, 751
MboI GATC 2 cut(s) 139, 749
MflI RGATCY 2 cut(s) 139, 749
MhlI GDGCHC 3 cut(s) 83, 308, 727
MluCI AATT 4 cut(s) 218, 310, 428, 623
MnlI CCTC 6 cut(s) 40, 141, 174, 236, 242, 507
MseI TTAA 4 cut(s) 216, 492, 717, 769
MspA1I CMGCKG 1 cut(s) 554
MspI CCGG 1 cut(s) 182
MspR9I CCNGG 2 cut(s) 650, 697
Mva1269I GAATGC 1 cut(s) 177
MvaI CCWGG 2 cut(s) 650, 697
MwoI GCNNNNNNNGC 2 cut(s) 111, 155
NdeII GATC 2 cut(s) 139, 749
NlaIII CATG 4 cut(s) 170, 603, 613, 767
NlaIV GGNNCC 6 cut(s) 141, 186, 306, 307, 438, 654
NspI RCATGY 1 cut(s) 603
PaeI GCATGC 1 cut(s) 603
PceI AGGCCT 1 cut(s) 648
PctI GAATGC 1 cut(s) 177
PfeI GAWTC 6 cut(s) 7, 13, 368, 410, 460, 692
PfoI TCCNGGA 1 cut(s) 695
PkrI GCNGC 5 cut(s) 157, 346, 553, 598, 605
PshBI ATTAAT 1 cut(s) 492
Psp124BI GAGCTC 1 cut(s) 727
Psp6I CCWGG 2 cut(s) 648, 695
PspGI CCWGG 2 cut(s) 648, 695
PspN4I GGNNCC 6 cut(s) 141, 186, 306, 307, 438, 654
PspOMI GGGCCC 1 cut(s) 304
PspPI GGNCC 3 cut(s) 55, 304, 305
PstNI CAGNNNCTG 2 cut(s) 155, 554
PsuI RGATCY 2 cut(s) 139, 749
RsaI GTAC 2 cut(s) 41, 275
RsaNI GTAC 2 cut(s) 40, 274
SacI GAGCTC 1 cut(s) 727
SaqAI TTAA 4 cut(s) 216, 492, 717, 769
SatI GCNGC 5 cut(s) 156, 345, 552, 597, 604
Sau3AI GATC 2 cut(s) 139, 749
Sau96I GGNCC 3 cut(s) 55, 304, 305
ScrFI CCNGG 2 cut(s) 650, 697
SduI GDGCHC 3 cut(s) 83, 308, 727
SfaNI GCATC 1 cut(s) 463
SmlI CTYRAG 1 cut(s) 192
SmoI CTYRAG 1 cut(s) 192
SphI GCATGC 1 cut(s) 603
Sse9I AATT 4 cut(s) 218, 310, 428, 623
SseBI AGGCCT 1 cut(s) 648
SsiI CCGC 2 cut(s) 552, 596
SstI GAGCTC 1 cut(s) 727
StuI AGGCCT 1 cut(s) 648
StyD4I CCNGG 2 cut(s) 648, 695
TaaI ACNGT 1 cut(s) 470
TaiI ACGT 2 cut(s) 41, 382
TasI AATT 4 cut(s) 218, 310, 428, 623
TatI WGTACW 1 cut(s) 273
TauI GCSGC 2 cut(s) 554, 599
TfiI GAWTC 6 cut(s) 7, 13, 368, 410, 460, 692
Tru1I TTAA 4 cut(s) 216, 492, 717, 769
Tru9I TTAA 4 cut(s) 216, 492, 717, 769
TscAI CASTG 2 cut(s) 274, 475
TseI GCWGC 3 cut(s) 155, 344, 603
TspDTI ATGAA 6 cut(s) 20, 239, 390, 473, 598, 717
TspGWI ACGGA 1 cut(s) 702
TspRI CASTG 2 cut(s) 274, 475
VspI ATTAAT 1 cut(s) 492
XapI RAATTY 1 cut(s) 218
XceI RCATGY 1 cut(s) 603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.