Rh2BG517500

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000975
Physical Location & Seq
Forward (+)
72595447 .. 72598447
3001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG517500.1

Sequence Viewer

Length: 744 bp
ATGGGTTCCAAGGAAGTAGCTAAAAAGCCTCATGTTGTTTGTGTTACACTCCCATTTCAAAGCCATATAAAGGCAATGCTCAAGCTAGCAAAACTCCTCCACCACCGAGGTTTCCATATAACCTTTGTCAACACAGAGTTCAACCACAAACGATTTCTTAAATCTCTCGGACTCAACTCCCTCGATGGATTGCCTGATTTCCGGTTTGAAACCGTTCCAGATGGCCTTCCGAGTTCGGATGAAGATGCATCGCAAGACGTCAGTTTGCTTTGCGAGTCTTTGAGGAAAAACTTCTTGACTCCGTTTCATGGGCTCCTCACAAAACTCAAGGGCTTGGCAAGTACTTCAAATACTTGTCCTCCGGTGACTCACATCGTTTCAGATGGTTGGAATGCCTATGTCCTTACAGCAGCAGAAAAACATCAAATTCCTGTCACACTCTTCTTTACTATGAGTGCAAGCAGCATCATGGCCTATGCACACTTCCCCGCTTTGATGGAAAAAGGACTCGCACCACTCAAAGATGAGAGCTGTTTGACAAATGGGTATTTGGACAAGATCATAGATTGGATTCCAGGAATGAAGGATATCCGGTTAAGGGATCTCCCGACCAACTTTCAAGTCACAAATCCCGATGACAGCGTCTGGAACTTTGTCCTTGAAGCAATTGAAGGACTTGGTTACAGAAACGAATTATTAAGGGTGAGGCTTTGTATTTCTCTGCTTGGCATTGTGAACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

247

Amino Acids

27.66

Weight (kDa)

7.14

Isoelectric Point (pI)

32.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 261
AciI CCGC 1 cut(s) 489
AclWI GGATC 1 cut(s) 609
AcsI RAATTY 1 cut(s) 426
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 1 cut(s) 343
AfiI CCNNNNNNNGG 3 cut(s) 70, 308, 598
AgsI TTSAA 7 cut(s) 59, 142, 209, 348, 620, 662, 671
AjnI CCWGG 1 cut(s) 574
AluBI AGCT 3 cut(s) 20, 85, 531
AluI AGCT 3 cut(s) 20, 85, 531
AlwI GGATC 1 cut(s) 609
AlwNI CAGNNNCTG 1 cut(s) 645
AoxI GGCC 2 cut(s) 223, 471
ApeKI GCWGC 2 cut(s) 410, 462
ApoI RAATTY 1 cut(s) 426
Asp700I GAANNNNTTC 2 cut(s) 213, 290
AsuHPI GGTGA 2 cut(s) 376, 715
AsuNHI GCTAGC 1 cut(s) 85
BanII GRGCYC 1 cut(s) 315
BbvI GCAGC 2 cut(s) 422, 474
BccI CCATC 4 cut(s) 179, 215, 377, 490
BciT130I CCWGG 1 cut(s) 576
BfaI CTAG 1 cut(s) 86
BisI GCNGC 2 cut(s) 411, 463
BlsI GCNGC 2 cut(s) 412, 464
BmcAI AGTACT 1 cut(s) 343
Bme1390I CCNGG 1 cut(s) 576
BmiI GGNNCC 2 cut(s) 7, 314
BmrFI CCNGG 1 cut(s) 576
BmsI GCATC 3 cut(s) 235, 257, 474
BmtI GCTAGC 1 cut(s) 89
BpuEI CTTGAG 2 cut(s) 65, 311
BsaHI GRCGYC 1 cut(s) 258
BsaJI CCNNGG 2 cut(s) 9, 106
BsaWI WCCGGW 3 cut(s) 201, 361, 591
BsaXI ACNNNNNCTCC 2 cut(s) 343, 373
Bsc4I CCNNNNNNNGG 3 cut(s) 70, 308, 598
Bse1I ACTGG 1 cut(s) 743
Bse3DI GCAATG 1 cut(s) 81
BseBI CCWGG 1 cut(s) 576
BseDI CCNNGG 2 cut(s) 9, 106
BseGI GGATG 1 cut(s) 244
BseLI CCNNNNNNNGG 3 cut(s) 70, 308, 598
BseMI GCAATG 1 cut(s) 81
BseNI ACTGG 1 cut(s) 743
BseRI GAGGAG 2 cut(s) 86, 305
BseXI GCAGC 2 cut(s) 422, 474
BshFI GGCC 2 cut(s) 225, 473
BsiSI CCGG 3 cut(s) 202, 362, 592
BslI CCNNNNNNNGG 3 cut(s) 70, 308, 598
BsmI GAATGC 1 cut(s) 397
BsnI GGCC 2 cut(s) 225, 473
Bsp1286I GDGCHC 1 cut(s) 315
Bsp143I GATC 2 cut(s) 558, 601
BspACI CCGC 1 cut(s) 489
BspANI GGCC 2 cut(s) 225, 473
BspLI GGNNCC 2 cut(s) 7, 314
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 1 cut(s) 609
BsrDI GCAATG 1 cut(s) 81
BsrI ACTGG 1 cut(s) 743
BssECI CCNNGG 2 cut(s) 9, 106
BssMI GATC 2 cut(s) 558, 601
BssNI GRCGYC 1 cut(s) 258
BssT1I CCWWGG 1 cut(s) 9
Bst2UI CCWGG 1 cut(s) 576
Bst4CI ACNGT 1 cut(s) 214
Bst6I CTCTTC 1 cut(s) 446
BstACI GRCGYC 1 cut(s) 258
BstC8I GCNNGC 2 cut(s) 87, 460
BstF5I GGATG 1 cut(s) 244
BstKTI GATC 2 cut(s) 561, 604
BstMBI GATC 2 cut(s) 558, 601
BstNI CCWGG 1 cut(s) 576
BstSCI CCNGG 1 cut(s) 574
BstV1I GCAGC 2 cut(s) 422, 474
BstX2I RGATCY 1 cut(s) 601
BstYI RGATCY 1 cut(s) 601
BsuRI GGCC 2 cut(s) 225, 473
BtgZI GCGATG 1 cut(s) 234
BtsCI GGATG 1 cut(s) 244
Cac8I GCNNGC 2 cut(s) 87, 460
CaiI CAGNNNCTG 1 cut(s) 645
CseI GACGC 1 cut(s) 631
Csp6I GTAC 1 cut(s) 342
CviAII CATG 3 cut(s) 32, 308, 469
CviQI GTAC 1 cut(s) 342
DpnI GATC 2 cut(s) 560, 603
DpnII GATC 2 cut(s) 558, 601
Eam1104I CTCTTC 1 cut(s) 446
EarI CTCTTC 1 cut(s) 446
Eco130I CCWWGG 1 cut(s) 9
Eco24I GRGCYC 1 cut(s) 315
Eco32I GATATC 1 cut(s) 589
EcoRII CCWGG 1 cut(s) 574
EcoRV GATATC 1 cut(s) 589
EcoT14I CCWWGG 1 cut(s) 9
EcoT22I ATGCAT 1 cut(s) 250
EcoT38I GRGCYC 1 cut(s) 315
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 3 cut(s) 35, 311, 472
FatI CATG 3 cut(s) 31, 307, 468
FauI CCCGC 1 cut(s) 496
Fnu4HI GCNGC 2 cut(s) 411, 463
FokI GGATG 1 cut(s) 251
FriOI GRGCYC 1 cut(s) 315
Fsp4HI GCNGC 2 cut(s) 411, 463
FspBI CTAG 1 cut(s) 86
GluI GCNGC 2 cut(s) 411, 463
HaeIII GGCC 2 cut(s) 225, 473
HapII CCGG 3 cut(s) 202, 362, 592
HgaI GACGC 1 cut(s) 631
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 3 cut(s) 35, 311, 472
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 6 cut(s) 171, 275, 298, 367, 507, 571
HpaII CCGG 3 cut(s) 202, 362, 592
HphI GGTGA 2 cut(s) 376, 715
Hpy166II GTNNAC 2 cut(s) 130, 736
Hpy188I TCNGA 4 cut(s) 170, 231, 238, 382
Hpy188III TCNNGA 5 cut(s) 218, 295, 607, 632, 646
Hpy8I GTNNAC 2 cut(s) 130, 736
HpyAV CCTTC 3 cut(s) 236, 577, 665
HpyCH4III ACNGT 1 cut(s) 214
HpyCH4IV ACGT 1 cut(s) 258
HpyCH4V TGCA 3 cut(s) 248, 458, 479
HpySE526I ACGT 1 cut(s) 258
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 3 cut(s) 35, 311, 472
Kzo9I GATC 2 cut(s) 558, 601
LmnI GCTCC 1 cut(s) 318
Lsp1109I GCAGC 2 cut(s) 422, 474
LweI GCATC 3 cut(s) 235, 257, 474
MaeI CTAG 1 cut(s) 86
MaeII ACGT 1 cut(s) 258
MaeIII GTNAC 5 cut(s) 43, 364, 433, 622, 680
MalI GATC 2 cut(s) 560, 603
MboI GATC 2 cut(s) 558, 601
MboII GAAGA 2 cut(s) 254, 433
MfeI CAATTG 1 cut(s) 666
MflI RGATCY 1 cut(s) 601
MhlI GDGCHC 1 cut(s) 315
MluCI AATT 3 cut(s) 426, 666, 692
MlyI GAGTC 5 cut(s) 165, 284, 292, 361, 501
MmeI TCCRAC 1 cut(s) 368
MnlI CCTC 8 cut(s) 39, 101, 107, 191, 276, 326, 369, 699
Mph1103I ATGCAT 1 cut(s) 250
MroXI GAANNNNTTC 2 cut(s) 213, 290
MseI TTAA 3 cut(s) 159, 596, 698
MspI CCGG 3 cut(s) 202, 362, 592
MspR9I CCNGG 1 cut(s) 576
MunI CAATTG 1 cut(s) 666
Mva1269I GAATGC 1 cut(s) 397
MvaI CCWGG 1 cut(s) 576
NdeII GATC 2 cut(s) 558, 601
NheI GCTAGC 1 cut(s) 85
NlaIII CATG 3 cut(s) 35, 311, 472
NlaIV GGNNCC 2 cut(s) 7, 314
NmuCI GTSAC 3 cut(s) 364, 433, 622
NsiI ATGCAT 1 cut(s) 250
PctI GAATGC 1 cut(s) 397
PdmI GAANNNNTTC 2 cut(s) 213, 290
PfeI GAWTC 1 cut(s) 571
PflFI GACNNNGTC 1 cut(s) 641
PfoI TCCNGGA 1 cut(s) 574
PkrI GCNGC 2 cut(s) 412, 464
PleI GAGTC 5 cut(s) 165, 283, 292, 361, 501
PpsI GAGTC 5 cut(s) 165, 283, 292, 361, 501
Psp6I CCWGG 1 cut(s) 574
PspGI CCWGG 1 cut(s) 574
PspN4I GGNNCC 2 cut(s) 7, 314
PstNI CAGNNNCTG 1 cut(s) 645
PsuI RGATCY 1 cut(s) 601
PsyI GACNNNGTC 1 cut(s) 641
RsaI GTAC 1 cut(s) 343
RsaNI GTAC 1 cut(s) 342
SaqAI TTAA 3 cut(s) 159, 596, 698
SatI GCNGC 2 cut(s) 411, 463
Sau3AI GATC 2 cut(s) 558, 601
ScaI AGTACT 1 cut(s) 343
SchI GAGTC 5 cut(s) 165, 284, 292, 361, 501
ScrFI CCNGG 1 cut(s) 576
SduI GDGCHC 1 cut(s) 315
SetI ASST 6 cut(s) 22, 87, 112, 125, 261, 533
SfaNI GCATC 3 cut(s) 235, 257, 474
SmlI CTYRAG 2 cut(s) 80, 326
SmoI CTYRAG 2 cut(s) 80, 326
Sse9I AATT 3 cut(s) 426, 666, 692
SsiI CCGC 1 cut(s) 489
SspMI CTAG 1 cut(s) 86
StyD4I CCNGG 1 cut(s) 574
StyI CCWWGG 1 cut(s) 9
TaaI ACNGT 1 cut(s) 214
TaiI ACGT 1 cut(s) 261
TaqI TCGA 1 cut(s) 183
TasI AATT 3 cut(s) 426, 666, 692
TatI WGTACW 1 cut(s) 341
TfiI GAWTC 1 cut(s) 571
Tru1I TTAA 3 cut(s) 159, 596, 698
Tru9I TTAA 3 cut(s) 159, 596, 698
TseFI GTSAC 3 cut(s) 364, 433, 622
TseI GCWGC 2 cut(s) 410, 462
Tsp45I GTSAC 3 cut(s) 364, 433, 622
TspDTI ATGAA 3 cut(s) 255, 296, 596
TspGWI ACGGA 1 cut(s) 291
Tth111I GACNNNGTC 1 cut(s) 641
XapI RAATTY 1 cut(s) 426
XmnI GAANNNNTTC 2 cut(s) 213, 290
XspI CTAG 1 cut(s) 86
ZraI GACGTC 1 cut(s) 259
ZrmI AGTACT 1 cut(s) 343
Zsp2I ATGCAT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.