Rh2DG246400

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
25339017 .. 25345762
6746 bp
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UTR
Exon/CDS
Intron
Rh2DG246400.1

Sequence Viewer

Length: 324 bp
ATGGGAAGAGGAAATATAGAGTTGGATGAATTGCTTGAATTGAAGAGCCATTGGCAACTGTGGCGTAATGGCACAAATAAAGAATATAACAGCGATGATCCGGTACTCAACACACCAATTGATTTCCCAGGAGTGAAAAATGCTACTCTCAAAGACATCCCTTACCATCCTAATGAAATAATGTTCGATTTCATGGGATCAGAAGCACAGAACTGCTTGAAATCTTCTGCAATTATCTTCAACACCTACGACGAATTTGAACATGAAGTGCTAGACGCAATCTCATCTACTATCCCCAACATTTACACAATTCCCCCTCCTTAA

Protein Analysis

107

Amino Acids

12.23

Weight (kDa)

4.43

Isoelectric Point (pI)

34.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 92, 205
AcsI RAATTY 1 cut(s) 254
AfaI GTAC 1 cut(s) 105
AgsI TTSAA 5 cut(s) 38, 43, 220, 241, 260
AjnI CCWGG 1 cut(s) 127
AlwI GGATC 2 cut(s) 92, 205
ApoI RAATTY 1 cut(s) 254
BccI CCATC 1 cut(s) 174
BciT130I CCWGG 1 cut(s) 129
BfaI CTAG 1 cut(s) 272
Bme1390I CCNGG 1 cut(s) 129
BmrFI CCNGG 1 cut(s) 129
BsaJI CCNNGG 1 cut(s) 127
BsaWI WCCGGW 1 cut(s) 100
BseBI CCWGG 1 cut(s) 129
BseDI CCNNGG 1 cut(s) 127
BseGI GGATG 3 cut(s) 31, 156, 166
BsiSI CCGG 1 cut(s) 101
Bsp143I GATC 2 cut(s) 97, 197
BspPI GGATC 2 cut(s) 92, 205
BspQI GCTCTTC 1 cut(s) 38
BssECI CCNNGG 1 cut(s) 127
BssMI GATC 2 cut(s) 97, 197
Bst2UI CCWGG 1 cut(s) 129
Bst4CI ACNGT 1 cut(s) 60
Bst6I CTCTTC 1 cut(s) 38
BstF5I GGATG 3 cut(s) 31, 156, 166
BstKTI GATC 2 cut(s) 100, 200
BstMBI GATC 2 cut(s) 97, 197
BstMWI GCNNNNNNNGC 1 cut(s) 61
BstNI CCWGG 1 cut(s) 129
BstSCI CCNGG 1 cut(s) 127
BtgZI GCGATG 1 cut(s) 108
BtsCI GGATG 3 cut(s) 31, 156, 166
CseI GACGC 1 cut(s) 284
Csp6I GTAC 1 cut(s) 104
CviAII CATG 2 cut(s) 193, 263
CviJI RGCY 1 cut(s) 48
CviKI_1 RGCY 1 cut(s) 48
CviQI GTAC 1 cut(s) 104
DpnI GATC 2 cut(s) 99, 199
DpnII GATC 2 cut(s) 97, 197
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
EcoRII CCWGG 1 cut(s) 127
FaeI CATG 2 cut(s) 196, 266
FaiI YATR 4 cut(s) 17, 87, 194, 264
FatI CATG 2 cut(s) 192, 262
FokI GGATG 3 cut(s) 38, 143, 153
FspBI CTAG 1 cut(s) 272
HapII CCGG 1 cut(s) 101
HgaI GACGC 1 cut(s) 284
Hin1II CATG 2 cut(s) 196, 266
HpaII CCGG 1 cut(s) 101
Hpy188I TCNGA 1 cut(s) 202
Hpy99I CGWCG 1 cut(s) 254
HpyCH4III ACNGT 1 cut(s) 60
HpyCH4V TGCA 1 cut(s) 230
HpyF10VI GCNNNNNNNGC 1 cut(s) 61
Hsp92II CATG 2 cut(s) 196, 266
Kzo9I GATC 2 cut(s) 97, 197
LguI GCTCTTC 1 cut(s) 38
LpnPI CCDG 3 cut(s) 114, 114, 141
MaeI CTAG 1 cut(s) 272
MalI GATC 2 cut(s) 99, 199
MboI GATC 2 cut(s) 97, 197
MboII GAAGA 4 cut(s) 18, 55, 216, 229
MfeI CAATTG 1 cut(s) 117
MluCI AATT 6 cut(s) 29, 38, 117, 231, 254, 309
MseI TTAA 1 cut(s) 322
MslI CAYNNNNRTG 1 cut(s) 171
MspI CCGG 1 cut(s) 101
MspR9I CCNGG 1 cut(s) 129
MunI CAATTG 1 cut(s) 117
MvaI CCWGG 1 cut(s) 129
MwoI GCNNNNNNNGC 1 cut(s) 61
NdeII GATC 2 cut(s) 97, 197
NlaIII CATG 2 cut(s) 196, 266
PciSI GCTCTTC 1 cut(s) 38
Psp6I CCWGG 1 cut(s) 127
PspGI CCWGG 1 cut(s) 127
RsaI GTAC 1 cut(s) 105
RsaNI GTAC 1 cut(s) 104
RseI CAYNNNNRTG 1 cut(s) 171
SapI GCTCTTC 1 cut(s) 38
SaqAI TTAA 1 cut(s) 322
Sau3AI GATC 2 cut(s) 97, 197
ScrFI CCNGG 1 cut(s) 129
SetI ASST 1 cut(s) 248
SgeI CNNG 8 cut(s) 47, 113, 140, 141, 205, 229, 275, 284
SmiMI CAYNNNNRTG 1 cut(s) 171
Sse9I AATT 6 cut(s) 29, 38, 117, 231, 254, 309
SspMI CTAG 1 cut(s) 272
StyD4I CCNGG 1 cut(s) 127
TaaI ACNGT 1 cut(s) 60
TaqI TCGA 1 cut(s) 186
TasI AATT 6 cut(s) 29, 38, 117, 231, 254, 309
Tru1I TTAA 1 cut(s) 322
Tru9I TTAA 1 cut(s) 322
TspDTI ATGAA 4 cut(s) 42, 181, 189, 279
XapI RAATTY 1 cut(s) 254
XspI CTAG 1 cut(s) 272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.