RLG00000020751

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000975
Physical Location & Seq
Forward (+)
68296762 .. 68298706
1945 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020751

Sequence Viewer

Length: 804 bp
ATGAGTTCCAAGGAGGTAGCTAATAAGCCTCATGTTATTTGCATTCCTATTCCTGTTCAAAGCCATAAAAAGGCGATGCTTAAATTAGCAAAACTCCTCCACCATAAAGGATTTCACATAACCTTTGTCAACACAGAGTTCAACCATATGCGCTTTCTCAAATCTCTAGGACCGAACTCTTCAGATGGCTTGCCTGACTTTCAGTTCAAGACCATTCCAGATGGTCTTCCTGTTTCAAATGAGGATGCCACCCAAGACATCAGTTTGCTTGGTGAATCCATCATGAAAAATTTCCTAGCTCCATTTCGTGACCTCATCATTAAACTCAATAACAATGTCACTGCAGCAACTTCAACCAATATTAGTAATCCTCCAGTGACTTGCATTGCTTCAGATGGTCTCATGCGGTTCGCAACCAAATTTGCTGAAGAACTTGGAATCCCTATTGCACTATTGTTTCCTTTTGCAGCATGCGCCTTCATGGGCTATAAACAATATCCCGCTCTAGTTGAAAAAGGTCTTGCACCACTCAAAGGAGTACCTATGCTATCTCTGCCATTCTTTGCAGAGCATCAAACAAAATGTTACTATACTTGCAAGGAATGGGGCATTGGCTTGGAGATTAACAATGATGTCAACAGAGATGAAGTGCAGAAGCTTGTTAGAAAGTTAATGGAAAGAGAGAAGGGTAAAGAAATGAAAAATAAGGTCATGGAGAGGAAGAAACTAGCAGAAGAAGCCACTGCTCCACATGGTTCGTCATCCAAAAACTTGGACAATTTAGTGAAACGGTTGCAAGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

268

Amino Acids

29.8

Weight (kDa)

9.17

Isoelectric Point (pI)

32.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 503
AciI CCGC 2 cut(s) 406, 501
AcsI RAATTY 2 cut(s) 289, 419
AcuI CTGAAG 3 cut(s) 165, 375, 447
AfaI GTAC 1 cut(s) 540
AfiI CCNNNNNNNGG 2 cut(s) 70, 533
AgsI TTSAA 6 cut(s) 59, 142, 208, 237, 354, 512
AjuI GAANNNNNNNTTGG 2 cut(s) 594, 626
AloI GAACNNNNNNTCC 2 cut(s) 423, 455
AluBI AGCT 3 cut(s) 20, 299, 658
AluI AGCT 3 cut(s) 20, 299, 658
Alw26I GTCTC 1 cut(s) 404
ApeKI GCWGC 2 cut(s) 344, 467
ApoI RAATTY 2 cut(s) 289, 419
Asp700I GAANNNNTTC 1 cut(s) 290
AspLEI GCGC 2 cut(s) 153, 476
AspS9I GGNCC 1 cut(s) 170
AsuHPI GGTGA 1 cut(s) 284
AvaII GGWCC 1 cut(s) 170
BbsI GAAGAC 1 cut(s) 218
BbvI GCAGC 2 cut(s) 356, 479
BccI CCATC 4 cut(s) 179, 215, 287, 389
BcoDI GTCTC 1 cut(s) 404
BfaI CTAG 4 cut(s) 167, 296, 506, 728
BfmI CTRYAG 1 cut(s) 342
BisI GCNGC 2 cut(s) 345, 468
BlsI GCNGC 2 cut(s) 346, 469
Bme18I GGWCC 1 cut(s) 170
BmgT120I GGNCC 1 cut(s) 170
BmsI GCATC 3 cut(s) 66, 235, 580
BpiI GAAGAC 1 cut(s) 218
BpmI CTGGAG 1 cut(s) 357
BsaI GGTCTC 1 cut(s) 404
BsaJI CCNNGG 1 cut(s) 9
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 533
Bse1I ACTGG 1 cut(s) 374
Bse3DI GCAATG 1 cut(s) 384
BseDI CCNNGG 1 cut(s) 9
BseGI GGATG 2 cut(s) 250, 761
BseLI CCNNNNNNNGG 2 cut(s) 70, 533
BseMI GCAATG 1 cut(s) 384
BseNI ACTGG 1 cut(s) 374
BseRI GAGGAG 1 cut(s) 86
BseXI GCAGC 2 cut(s) 356, 479
BsgI GTGCAG 1 cut(s) 671
BslI CCNNNNNNNGG 2 cut(s) 70, 533
BsmAI GTCTC 1 cut(s) 404
BsmI GAATGC 1 cut(s) 42
Bso31I GGTCTC 1 cut(s) 404
BspACI CCGC 2 cut(s) 406, 501
BspHI TCATGA 1 cut(s) 282
BspMAI CTGCAG 1 cut(s) 346
BspTNI GGTCTC 1 cut(s) 404
BsrBI CCGCTC 1 cut(s) 503
BsrDI GCAATG 1 cut(s) 384
BsrI ACTGG 1 cut(s) 374
BssECI CCNNGG 1 cut(s) 9
BssT1I CCWWGG 1 cut(s) 9
Bst4CI ACNGT 1 cut(s) 792
Bst6I CTCTTC 1 cut(s) 184
BstC8I GCNNGC 3 cut(s) 191, 472, 798
BstF5I GGATG 2 cut(s) 250, 761
BstHHI GCGC 2 cut(s) 153, 476
BstMAI GTCTC 1 cut(s) 404
BstMWI GCNNNNNNNGC 3 cut(s) 473, 553, 737
BstNSI RCATGY 1 cut(s) 474
BstSFI CTRYAG 1 cut(s) 342
BstV1I GCAGC 2 cut(s) 356, 479
BstV2I GAAGAC 1 cut(s) 218
BstXI CCANNNNNNTGG 1 cut(s) 772
BtgZI GCGATG 1 cut(s) 89
BtsCI GGATG 2 cut(s) 250, 761
BtsI GCAGTG 2 cut(s) 339, 741
BtsIMutI CAGTG 3 cut(s) 339, 381, 741
Cac8I GCNNGC 3 cut(s) 191, 472, 798
CciI TCATGA 1 cut(s) 282
CfoI GCGC 2 cut(s) 153, 476
Cfr13I GGNCC 1 cut(s) 170
Csp6I GTAC 1 cut(s) 539
CviAII CATG 7 cut(s) 32, 283, 403, 471, 481, 712, 752
CviJI RGCY 9 cut(s) 20, 28, 63, 189, 299, 486, 615, 658, 740
CviKI_1 RGCY 9 cut(s) 20, 28, 63, 189, 299, 486, 615, 658, 740
CviQI GTAC 1 cut(s) 539
Eam1104I CTCTTC 1 cut(s) 184
EarI CTCTTC 1 cut(s) 184
Eco130I CCWWGG 1 cut(s) 9
Eco31I GGTCTC 1 cut(s) 404
Eco47I GGWCC 1 cut(s) 170
Eco57I CTGAAG 3 cut(s) 165, 375, 447
EcoT14I CCWWGG 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 7 cut(s) 35, 286, 406, 474, 484, 715, 755
FatI CATG 7 cut(s) 31, 282, 402, 470, 480, 711, 751
FauI CCCGC 1 cut(s) 508
FauNDI CATATG 1 cut(s) 147
Fnu4HI GCNGC 2 cut(s) 345, 468
FokI GGATG 2 cut(s) 257, 748
Fsp4HI GCNGC 2 cut(s) 345, 468
FspBI CTAG 4 cut(s) 167, 296, 506, 728
GlaI GCGC 2 cut(s) 152, 475
GluI GCNGC 2 cut(s) 345, 468
GsuI CTGGAG 1 cut(s) 357
HhaI GCGC 2 cut(s) 153, 476
Hin1II CATG 7 cut(s) 35, 286, 406, 474, 484, 715, 755
Hin6I GCGC 2 cut(s) 151, 474
HinP1I GCGC 2 cut(s) 151, 474
HincII GTYRAC 2 cut(s) 130, 637
HindII GTYRAC 2 cut(s) 130, 637
HindIII AAGCTT 1 cut(s) 656
HinfI GANTC 2 cut(s) 275, 438
HphI GGTGA 1 cut(s) 284
Hpy166II GTNNAC 2 cut(s) 130, 637
Hpy188I TCNGA 2 cut(s) 184, 394
Hpy188III TCNNGA 4 cut(s) 208, 218, 283, 308
Hpy8I GTNNAC 2 cut(s) 130, 637
HpyAV CCTTC 2 cut(s) 487, 679
HpyCH4III ACNGT 1 cut(s) 792
HpyF10VI GCNNNNNNNGC 3 cut(s) 473, 553, 737
Hsp92II CATG 7 cut(s) 35, 286, 406, 474, 484, 715, 755
HspAI GCGC 2 cut(s) 151, 474
LmnI GCTCC 2 cut(s) 304, 751
LpnPI CCDG 5 cut(s) 66, 207, 231, 243, 387
Lsp1109I GCAGC 2 cut(s) 356, 479
LweI GCATC 3 cut(s) 66, 235, 580
MaeI CTAG 4 cut(s) 167, 296, 506, 728
MaeIII GTNAC 4 cut(s) 308, 337, 376, 584
MbiI CCGCTC 1 cut(s) 503
MboII GAAGA 5 cut(s) 171, 218, 440, 733, 746
MluCI AATT 4 cut(s) 83, 289, 419, 778
MnlI CCTC 7 cut(s) 7, 39, 107, 235, 323, 381, 711
MroXI GAANNNNTTC 1 cut(s) 290
MseI TTAA 4 cut(s) 81, 321, 624, 671
Mva1269I GAATGC 1 cut(s) 42
MwoI GCNNNNNNNGC 3 cut(s) 473, 553, 737
NdeI CATATG 1 cut(s) 147
NlaIII CATG 7 cut(s) 35, 286, 406, 474, 484, 715, 755
NmuCI GTSAC 3 cut(s) 308, 337, 376
NspI RCATGY 1 cut(s) 474
PaeI GCATGC 1 cut(s) 474
PagI TCATGA 1 cut(s) 282
PctI GAATGC 1 cut(s) 42
PdmI GAANNNNTTC 1 cut(s) 290
PfeI GAWTC 2 cut(s) 275, 438
PkrI GCNGC 2 cut(s) 346, 469
PspPI GGNCC 1 cut(s) 170
PstI CTGCAG 1 cut(s) 346
RsaI GTAC 1 cut(s) 540
RsaNI GTAC 1 cut(s) 539
SaqAI TTAA 4 cut(s) 81, 321, 624, 671
SatI GCNGC 2 cut(s) 345, 468
Sau96I GGNCC 1 cut(s) 170
SetI ASST 9 cut(s) 18, 22, 125, 301, 315, 520, 544, 660, 711
SfaNI GCATC 3 cut(s) 66, 235, 580
SfcI CTRYAG 1 cut(s) 342
SinI GGWCC 1 cut(s) 170
SphI GCATGC 1 cut(s) 474
Sse9I AATT 4 cut(s) 83, 289, 419, 778
SsiI CCGC 2 cut(s) 406, 501
SspI AATATT 1 cut(s) 361
SspMI CTAG 4 cut(s) 167, 296, 506, 728
StyI CCWWGG 1 cut(s) 9
TaaI ACNGT 1 cut(s) 792
TaqII GACCGA 1 cut(s) 187
TasI AATT 4 cut(s) 83, 289, 419, 778
TfiI GAWTC 2 cut(s) 275, 438
Tru1I TTAA 4 cut(s) 81, 321, 624, 671
Tru9I TTAA 4 cut(s) 81, 321, 624, 671
TscAI CASTG 3 cut(s) 346, 381, 748
TseFI GTSAC 3 cut(s) 308, 337, 376
TseI GCWGC 2 cut(s) 344, 467
Tsp45I GTSAC 3 cut(s) 308, 337, 376
TspDTI ATGAA 4 cut(s) 299, 469, 660, 713
TspRI CASTG 3 cut(s) 346, 381, 748
VpaK11BI GGWCC 1 cut(s) 170
XapI RAATTY 2 cut(s) 289, 419
XceI RCATGY 1 cut(s) 474
XmnI GAANNNNTTC 1 cut(s) 290
XspI CTAG 4 cut(s) 167, 296, 506, 728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.