Prupe.1G044800_v2.0.a1

Belongs to the eIF-2B alpha beta delta subunits family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000605
Physical Location & Seq
Forward (+)
3199951 .. 3204931
4981 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G044800.1

Sequence Viewer

Length: 1251 bp
ATGGCCGACGTCCAAGGTCTCGTCAATGACTTTGCCACTAAGCTCAGCAAACGGAAGGTGGAGGGTTCGAGGGAGACTGCTCGGATGACGGCGGAGTTGCTTCGGACGGTAATATCGCAACAGAAGATGACATCATCCACAAACCATGCCGCCGTTCTTATTGACGCCGTCAGAGGTGTTGGCGGGCGGCTTATTGATGCTAATCCTGTTGAACTTGCTGTTGGGAACATTGTGAGGCGTGTTTTGTATATTATTAGAGAGGAGGAGCTTTCACTTCAAGCTGGAGAATTGACTTTATCCTCTCAAGACAGTGATAGAGAAATTGATGAGGAAGATGATAAACTTTTCCTGTCGTCTGCTGCTACTTATCAAAGAATTCTGCATCCACCTTCATTGGCTACGCTGCTTGGGAGCAAAACCGACACACCACCAGCTTGCCATCCTTCAGCTTCAAGGAATCATGATATTGAGGGAAAAGCTGATAAAAGTCCAAGCAGCTTGACATTGAAGCGCCATATCATGGAGGCAGTAAATGATCTCATTGAAGATATAAAAACTTGCCATGAGCAGATTGCAGATCAGGCAGTAGAGCTAATCCATCAGAACGAGGTGGTACTAACCTTAGGCCACTCAAGAACTGTGAAGAAATTCCTATGTGCTGCGAAGGAGAAGAAACGATCGTTCCAGGTGGTCGTTGCTGAGGGTGCTCCAAAGTATCTTGGACATGTTCTTGCAAAAGGGCTGGCTGCAAAAGGTTTACAAACTACAATGATTGCCGACTCTTCAGTGTTTGCCATGATTTCACGAGTAAACATGGTTGTAGTTGGGGTTCGTGCTGTGCTGGCCAATGGTGGAGTCATAGCTCCTGTTGGCATAAACATGGTTGCACTTGCTGCAAGAAAGCATGCTGTTCCATTTGTCGTGGTTGCTGGCACTTATAAGTTGTGTCCTTTGTATCCAAATAATCCGGAGGTTTTGCTGAATGATATGAGATGCCCATCGGAACTCTTATCTTTTGGGGAATTCTCAGATTGCATAGATTTTAGTATCGGCAGCGAAGCTCCTCTTCTTCATGTTCTTAATCCTGCATTTGATTATGTGCCACCAGAACTAGTCAGTCTTTTTGTCACTGATACTGGGGGGCATACTCCATCATTCATCTATAGGCTCATTTCTGAATTTTACTCTGCTGATGATTTGGCTCTGCAACAAAAACTGCTTCCTGAAAGTGAACATTCTAATTCCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
IF-2B

Protein Analysis

417

Amino Acids

45.2

Weight (kDa)

5.83

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000605)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07300 AT3G07300 AT3G07300
fragaria_vesca FvH4_1g26370 FvH4_4g04150 FvH4_7g02780 FvH4_7g02780 FvH4_7g02780 FvH4_7g02780
malus_domestica MD02G1290200.v1.1 MD07G1036800.v1.1 MD13G1218100.v1.1 MD13G1218200.v1.1
prunus_persica Prupe.1G044800_v2.0.a1 Prupe.2G032300_v2.0.a1 Prupe.2G032300_v2.0.a1 Prupe.2G032300_v2.0.a1
pyrus_communis pycom07g02550
rosa_chinensis RchiOBHm_Chr1g0313651 RchiOBHm_Chr1g0322021 RchiOBHm_Chr1g0322871 RchiOBHm_Chr1g0322881 RchiOBHm_Chr1g0378031 RchiOBHm_Chr2g0146721 RchiOBHm_Chr4g0394571 RchiOBHm_Chr4g0444661
rosa_laevigata RLG00000009689 RLG00000014710 RLG00000020215 RLG00000028674 RLG00000030393
rosa_multiflora Rmu_sc0001168.1_g000008 Rmu_sc0001168.1_g000019 Rmu_sc0001986.1_g000042 Rmu_sc0005424.1_g000018
rosa_roxburghii Rroxscaffold_1G00066950 Rroxscaffold_4G00308160 Rroxscaffold_4G00327340 Rroxscaffold_4G00331500 Rroxscaffold_5G00339610 Rroxscaffold_5G00370190 Rroxscaffold_6G00400520 Rroxscaffold_7G00188200
rosa_rugosa Rorug01G0035100 Rorug01G0035200 Rorug01G0131800.1 Rorug01G0193700 Rorug03G0291700 Rorug03G0291800 Rorug03G0291800 Rorug03G0291900 Rorug03G0364400.1 Rorug04G0439300 Rorug04G0439400 Rorug05G0543000 Rorug07G0306800
rosa_samantha Rh1AG048400 Rh1AG309400 Rh1AG358100 Rh1AG424800 Rh1BG046200 Rh1CG052500 Rh1DG056700 Rh2AG452600 Rh2BG465300 Rh2CG439500 Rh2DG245700 Rh2DG245800 Rh2DG474300 Rh4AG053000 Rh4BG050900 Rh4CG057700 Rh4DG049700 Rh5BG052500 Rh5DG543800 Rh6DG164300 Rh7AG422900 Rh7BG328900
rosa_wichuraiana Rw1G004380 Rw4G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 939
AatII GACGTC 1 cut(s) 12
AccB7I CCANNNNNTGG 1 cut(s) 520
AccIII TCCGGA 1 cut(s) 967
AciI CCGC 4 cut(s) 92, 150, 183, 187
AcoI YGGCCR 2 cut(s) 3, 843
AcsI RAATTY 4 cut(s) 375, 647, 1022, 1178
AcuI CTGAAG 2 cut(s) 429, 768
AcyI GRCGYC 2 cut(s) 9, 165
AfaI GTAC 1 cut(s) 615
AfiI CCNNNNNNNGG 1 cut(s) 520
AflIII ACRYGT 1 cut(s) 724
AgsI TTSAA 5 cut(s) 212, 278, 453, 508, 545
AhlI ACTAGT 1 cut(s) 1111
AjnI CCWGG 1 cut(s) 684
AjuI GAANNNNNNNTTGG 2 cut(s) 204, 236
Alw21I GWGCWC 1 cut(s) 709
Alw26I GTCTC 2 cut(s) 23, 68
Aor13HI TCCGGA 1 cut(s) 967
AoxI GGCC 3 cut(s) 3, 625, 843
ApeKI GCWGC 7 cut(s) 359, 403, 495, 659, 746, 893, 1053
ApoI RAATTY 4 cut(s) 375, 647, 1022, 1178
Asp700I GAANNNNTTC 1 cut(s) 647
AspLEI GCGC 1 cut(s) 513
AxyI CCTNAGG 1 cut(s) 622
BalI TGGCCA 1 cut(s) 845
BauI CACGAG 1 cut(s) 804
Bbv12I GWGCWC 1 cut(s) 709
BbvCI CCTCAGC 1 cut(s) 699
BbvI GCAGC 7 cut(s) 346, 390, 507, 646, 733, 880, 1065
BccI CCATC 4 cut(s) 447, 606, 1006, 1159
BceAI ACGGC 3 cut(s) 105, 137, 152
BciT130I CCWGG 1 cut(s) 686
BciVI GTATCC 1 cut(s) 966
BcoDI GTCTC 2 cut(s) 23, 68
BcuI ACTAGT 1 cut(s) 1111
BfaI CTAG 1 cut(s) 1112
BfmI CTRYAG 1 cut(s) 1162
BfoI RGCGCY 1 cut(s) 514
BfuI GTATCC 1 cut(s) 966
BisI GCNGC 9 cut(s) 150, 188, 360, 404, 496, 660, 747, 894, 1054
BlpI GCTNAGC 1 cut(s) 44
BlsI GCNGC 9 cut(s) 151, 189, 361, 405, 497, 661, 748, 895, 1055
Bme1390I CCNGG 1 cut(s) 686
BmrFI CCNGG 1 cut(s) 686
BmrI ACTGGG 1 cut(s) 1146
BmsI GCATC 3 cut(s) 187, 391, 983
BmuI ACTGGG 1 cut(s) 1146
BpmI CTGGAG 1 cut(s) 303
Bpu10I CCTNAGC 1 cut(s) 699
Bpu1102I GCTNAGC 1 cut(s) 44
BpuEI CTTGAG 2 cut(s) 288, 616
BsaBI GATNNNNATC 2 cut(s) 201, 997
BsaHI GRCGYC 2 cut(s) 9, 165
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 1 cut(s) 13
BsaWI WCCGGW 1 cut(s) 967
Bsc4I CCNNNNNNNGG 1 cut(s) 520
Bse1I ACTGG 1 cut(s) 1141
Bse21I CCTNAGG 1 cut(s) 622
Bse8I GATNNNNATC 2 cut(s) 201, 997
BseAI TCCGGA 1 cut(s) 967
BseBI CCWGG 1 cut(s) 686
BseDI CCNNGG 1 cut(s) 13
BseGI GGATG 4 cut(s) 90, 134, 382, 439
BseJI GATNNNNATC 2 cut(s) 201, 997
BseLI CCNNNNNNNGG 1 cut(s) 520
BseMII CTCAG 3 cut(s) 58, 690, 1041
BseNI ACTGG 1 cut(s) 1141
BseRI GAGGAG 3 cut(s) 275, 278, 1053
BseXI GCAGC 7 cut(s) 346, 390, 507, 646, 733, 880, 1065
Bsh1285I CGRYCG 1 cut(s) 680
BshFI GGCC 3 cut(s) 5, 627, 845
BsiEI CGRYCG 1 cut(s) 680
BsiHKAI GWGCWC 1 cut(s) 709
BsiSI CCGG 1 cut(s) 968
BslI CCNNNNNNNGG 1 cut(s) 520
BsmAI GTCTC 2 cut(s) 23, 68
BsnI GGCC 3 cut(s) 5, 627, 845
Bso31I GGTCTC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 709
Bsp13I TCCGGA 1 cut(s) 967
Bsp143I GATC 3 cut(s) 535, 577, 677
Bsp1720I GCTNAGC 1 cut(s) 44
BspACI CCGC 4 cut(s) 92, 150, 183, 187
BspANI GGCC 3 cut(s) 5, 627, 845
BspCNI CTCAG 3 cut(s) 57, 691, 1040
BspEI TCCGGA 1 cut(s) 967
BspHI TCATGA 1 cut(s) 460
BspTNI GGTCTC 1 cut(s) 23
BsrI ACTGG 1 cut(s) 1141
BssECI CCNNGG 1 cut(s) 13
BssMI GATC 3 cut(s) 535, 577, 677
BssNI GRCGYC 2 cut(s) 9, 165
BssSI CACGAG 1 cut(s) 804
BssT1I CCWWGG 1 cut(s) 13
Bst2BI CACGAG 1 cut(s) 804
Bst2UI CCWGG 1 cut(s) 686
Bst4CI ACNGT 3 cut(s) 109, 311, 640
Bst6I CTCTTC 2 cut(s) 787, 1071
BstACI GRCGYC 2 cut(s) 9, 165
BstAPI GCANNNNNTGC 1 cut(s) 893
BstC8I GCNNGC 6 cut(s) 185, 436, 744, 843, 906, 931
BstDEI CTNAG 5 cut(s) 39, 44, 622, 699, 1027
BstF5I GGATG 4 cut(s) 90, 134, 382, 439
BstH2I RGCGCY 1 cut(s) 514
BstHHI GCGC 1 cut(s) 513
BstKTI GATC 3 cut(s) 538, 580, 680
BstMAI GTCTC 2 cut(s) 23, 68
BstMBI GATC 3 cut(s) 535, 577, 677
BstMCI CGRYCG 1 cut(s) 680
BstMWI GCNNNNNNNGC 4 cut(s) 581, 704, 842, 893
BstNI CCWGG 1 cut(s) 686
BstNSI RCATGY 2 cut(s) 728, 908
BstSCI CCNGG 1 cut(s) 684
BstSFI CTRYAG 1 cut(s) 1162
BstV1I GCAGC 7 cut(s) 346, 390, 507, 646, 733, 880, 1065
Bsu36I CCTNAGG 1 cut(s) 622
BsuI GTATCC 1 cut(s) 966
BsuRI GGCC 3 cut(s) 5, 627, 845
BtsCI GGATG 4 cut(s) 90, 134, 382, 439
BtsIMutI CAGTG 3 cut(s) 316, 792, 1128
Cac8I GCNNGC 6 cut(s) 185, 436, 744, 843, 906, 931
CciI TCATGA 1 cut(s) 460
CfoI GCGC 1 cut(s) 513
CseI GACGC 1 cut(s) 173
Csp6I GTAC 1 cut(s) 614
CspCI CAANNNNNGTGG 2 cut(s) 375, 410
CviQI GTAC 1 cut(s) 614
DdeI CTNAG 5 cut(s) 39, 44, 622, 699, 1027
DpnI GATC 3 cut(s) 537, 579, 679
DpnII GATC 3 cut(s) 535, 577, 677
EaeI YGGCCR 2 cut(s) 3, 843
Eam1104I CTCTTC 2 cut(s) 787, 1071
EarI CTCTTC 2 cut(s) 787, 1071
EciI GGCGGA 1 cut(s) 107
Eco130I CCWWGG 1 cut(s) 13
Eco31I GGTCTC 1 cut(s) 23
Eco57I CTGAAG 2 cut(s) 429, 768
Eco81I CCTNAGG 1 cut(s) 622
EcoRI GAATTC 2 cut(s) 375, 1022
EcoRII CCWGG 1 cut(s) 684
EcoT14I CCWWGG 1 cut(s) 13
ErhI CCWWGG 1 cut(s) 13
FalI AAGNNNNNCTT 2 cut(s) 1050, 1082
FauI CCCGC 1 cut(s) 176
Fnu4HI GCNGC 9 cut(s) 150, 188, 360, 404, 496, 660, 747, 894, 1054
FokI GGATG 4 cut(s) 97, 121, 369, 426
Fsp4HI GCNGC 9 cut(s) 150, 188, 360, 404, 496, 660, 747, 894, 1054
FspBI CTAG 1 cut(s) 1112
GlaI GCGC 1 cut(s) 512
GluI GCNGC 9 cut(s) 150, 188, 360, 404, 496, 660, 747, 894, 1054
GsuI CTGGAG 1 cut(s) 303
HaeII RGCGCY 1 cut(s) 514
HaeIII GGCC 3 cut(s) 5, 627, 845
HapII CCGG 1 cut(s) 968
HgaI GACGC 1 cut(s) 173
HhaI GCGC 1 cut(s) 513
Hin1I GRCGYC 2 cut(s) 9, 165
Hin6I GCGC 1 cut(s) 511
HinP1I GCGC 1 cut(s) 511
HinfI GANTC 3 cut(s) 457, 779, 855
HpaII CCGG 1 cut(s) 968
Hpy166II GTNNAC 3 cut(s) 758, 811, 1232
Hpy188I TCNGA 7 cut(s) 84, 105, 173, 603, 1003, 1030, 1177
Hpy188III TCNNGA 6 cut(s) 305, 461, 633, 804, 968, 1223
Hpy8I GTNNAC 3 cut(s) 758, 811, 1232
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 4 cut(s) 49, 399, 453, 658
HpyCH4III ACNGT 3 cut(s) 109, 311, 640
HpyCH4IV ACGT 1 cut(s) 9
HpyCH4V TGCA 9 cut(s) 382, 575, 734, 749, 887, 896, 1035, 1088, 1207
HpyF10VI GCNNNNNNNGC 4 cut(s) 581, 704, 842, 893
HpyF3I CTNAG 5 cut(s) 39, 44, 622, 699, 1027
HpySE526I ACGT 1 cut(s) 9
Hsp92I GRCGYC 2 cut(s) 9, 165
HspAI GCGC 1 cut(s) 511
Kpn2I TCCGGA 1 cut(s) 967
Kzo9I GATC 3 cut(s) 535, 577, 677
LmnI GCTCC 5 cut(s) 265, 411, 712, 868, 1066
Lsp1109I GCAGC 7 cut(s) 346, 390, 507, 646, 733, 880, 1065
LweI GCATC 3 cut(s) 187, 391, 983
MaeI CTAG 1 cut(s) 1112
MaeII ACGT 1 cut(s) 9
MaeIII GTNAC 1 cut(s) 1126
MalI GATC 3 cut(s) 537, 579, 679
MboI GATC 3 cut(s) 535, 577, 677
MboII GAAGA 8 cut(s) 136, 344, 557, 655, 682, 774, 1058, 1061
MhlI GDGCHC 1 cut(s) 709
MlsI TGGCCA 1 cut(s) 845
MluCI AATT 7 cut(s) 287, 321, 375, 647, 1022, 1178, 1240
MluNI TGGCCA 1 cut(s) 845
MlyI GAGTC 2 cut(s) 773, 864
Mox20I TGGCCA 1 cut(s) 845
MroI TCCGGA 1 cut(s) 967
MroXI GAANNNNTTC 1 cut(s) 647
MscI TGGCCA 1 cut(s) 845
MseI TTAA 1 cut(s) 1080
MslI CAYNNNNRTG 1 cut(s) 878
Msp20I TGGCCA 1 cut(s) 845
MspI CCGG 1 cut(s) 968
MspR9I CCNGG 1 cut(s) 686
MvaI CCWGG 1 cut(s) 686
MwoI GCNNNNNNNGC 4 cut(s) 581, 704, 842, 893
NdeII GATC 3 cut(s) 535, 577, 677
NmuCI GTSAC 1 cut(s) 1126
NspI RCATGY 2 cut(s) 728, 908
PaeI GCATGC 1 cut(s) 908
PagI TCATGA 1 cut(s) 460
PciI ACATGT 1 cut(s) 724
PdmI GAANNNNTTC 1 cut(s) 647
PfeI GAWTC 1 cut(s) 457
PflFI GACNNNGTC 1 cut(s) 167
PflMI CCANNNNNTGG 1 cut(s) 520
PkrI GCNGC 9 cut(s) 151, 189, 361, 405, 497, 661, 748, 895, 1055
Ple19I CGATCG 1 cut(s) 680
PleI GAGTC 2 cut(s) 773, 863
PpsI GAGTC 2 cut(s) 773, 863
PscI ACATGT 1 cut(s) 724
PsiI TTATAA 1 cut(s) 939
Psp6I CCWGG 1 cut(s) 684
PspGI CCWGG 1 cut(s) 684
PsrI GAACNNNNNNTAC 2 cut(s) 813, 845
PsyI GACNNNGTC 1 cut(s) 167
PvuI CGATCG 1 cut(s) 680
RsaI GTAC 1 cut(s) 615
RsaNI GTAC 1 cut(s) 614
RseI CAYNNNNRTG 1 cut(s) 878
SaqAI TTAA 1 cut(s) 1080
SatI GCNGC 9 cut(s) 150, 188, 360, 404, 496, 660, 747, 894, 1054
Sau3AI GATC 3 cut(s) 535, 577, 677
SchI GAGTC 2 cut(s) 773, 864
ScrFI CCNGG 1 cut(s) 686
SduI GDGCHC 1 cut(s) 709
SfaNI GCATC 3 cut(s) 187, 391, 983
SfcI CTRYAG 1 cut(s) 1162
SmiMI CAYNNNNRTG 1 cut(s) 878
SmlI CTYRAG 2 cut(s) 303, 631
SmoI CTYRAG 2 cut(s) 303, 631
SpeI ACTAGT 1 cut(s) 1111
SphI GCATGC 1 cut(s) 908
Sse9I AATT 7 cut(s) 287, 321, 375, 647, 1022, 1178, 1240
SsiI CCGC 4 cut(s) 92, 150, 183, 187
SspMI CTAG 1 cut(s) 1112
StyD4I CCNGG 1 cut(s) 684
StyI CCWWGG 1 cut(s) 13
TaaI ACNGT 3 cut(s) 109, 311, 640
TaiI ACGT 1 cut(s) 12
TaqI TCGA 1 cut(s) 68
TasI AATT 7 cut(s) 287, 321, 375, 647, 1022, 1178, 1240
TauI GCSGC 2 cut(s) 152, 190
TfiI GAWTC 1 cut(s) 457
Tru1I TTAA 1 cut(s) 1080
Tru9I TTAA 1 cut(s) 1080
TscAI CASTG 3 cut(s) 316, 792, 1135
TseFI GTSAC 1 cut(s) 1126
TseI GCWGC 7 cut(s) 359, 403, 495, 659, 746, 893, 1053
Tsp45I GTSAC 1 cut(s) 1126
TspDTI ATGAA 3 cut(s) 381, 1061, 1147
TspGWI ACGGA 1 cut(s) 67
TspRI CASTG 3 cut(s) 316, 792, 1135
Tth111I GACNNNGTC 1 cut(s) 167
Van91I CCANNNNNTGG 1 cut(s) 520
XapI RAATTY 4 cut(s) 375, 647, 1022, 1178
XceI RCATGY 2 cut(s) 728, 908
XmnI GAANNNNTTC 1 cut(s) 647
XspI CTAG 1 cut(s) 1112
ZraI GACGTC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.