Prupe.2G032300_v2.0.a1

Belongs to the eIF-2B alpha beta delta subunits family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
3484230 .. 3493692
9463 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G032300.3

Sequence Viewer

Length: 1254 bp
ATGCCAGACGTGCATTCCCTGGTGAATGATTTCCTTATCAAGCTTAAAAAACGTAATATTGAGGGCTCACAGGCCACAGCAAAGCTGACGGCGGAATTACTTCGGTCCGTGATTTCATCACAGCGGGTACCCTACACAAATCAAGCTGGTGCCTTGATAGATGCTGTTAAAGCTGTTGGGGAGCAGCTGATTGCTGCAAATCCTATTGAGCTGGCTGTGGGTAATATTGTGAGGCGTGTTCTGCACATTATTAGGGAGGAGGATCTTTCTCTCACTACAGCTGCTATGGCTGGGTTGAACATGTCGACTGTTAGTGATGATGAAGATGATGGTGAGCACGACAACCATCCGGTTCTATCTGCTGCTGTTGTTGCTGCTGCTGCAAGGAGCACACTGCGTCCACCATCTTTGCAAACGCTTCTTGAGGACATGCCTGATGCAGCAGCTGTTCCTCACACTTCTTCATCTGGGGGTGATTCTGAAGAAAAAACCAAATCTGCTGATAAAAGTTCAAGAAGTCGGAAACTGAAGCATGATGTCATTGAAGCAGTCAATGAACTTATACAAGATATTGGCACTTGCCATGAACAGATTGCCGAGCAGGCAGTTGAGCACATTCACCAGAATGAGGTTATATTAACTTTAGGCAGTTCAAAAACAGTACTGGAATTTCTTTGTGCTGCAAATGAGAAAAAAAGATCATTTCGGGTATTTGTTGCAGAGGGAGCTCCAAGGTATCAGGGCCATCTTCTAGCTAAAGAATTGGTTGCAAGAGGTTTGCAAACCACGCTGATCACTGATTCAGCAGTTTTTGCCATGATATCCAGAGTGAACATGGTTATAGTTGGCGCTCATGCTGTCATGGCCAATGGTGGTGTTATAGCACCTGTTGGGTTGAATATGGTTGCACTTGCAGCGCAAAGGCATGCCGTCCCTTTTGTTGTACTTGCCGGCAGTCATAAGTTGTGCCCTTTGTATCCTCACAATCCTGAAGTGTTGCTGAATGAGTTAAGATCCCCTTCTGAGCTGCTGGATTTTGGAGAATTCTCCGATTGCATGGATTTTGGAAGTGGCACTGCTTCCCCGCTCCTTCATGTTGTCAATCCTACATTTGATTATGTGCCACCAAAGCTTGTCAGTTTATTTATCACTGATACAGGAGGGCATAATCCATCATACATGTACCGGCTCATCGCAGATTATTATTCTGCTGATGATTTAGTGGTCCAACGAAGACCTGCTATAGGAAGTTGA

Protein Analysis

418

Amino Acids

44.91

Weight (kDa)

5.64

Isoelectric Point (pI)

54.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000605)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07300 AT3G07300 AT3G07300
fragaria_vesca FvH4_1g26370 FvH4_4g04150 FvH4_7g02780 FvH4_7g02780 FvH4_7g02780 FvH4_7g02780
malus_domestica MD02G1290200.v1.1 MD07G1036800.v1.1 MD13G1218100.v1.1 MD13G1218200.v1.1
prunus_persica Prupe.1G044800_v2.0.a1 Prupe.2G032300_v2.0.a1 Prupe.2G032300_v2.0.a1 Prupe.2G032300_v2.0.a1
pyrus_communis pycom07g02550
rosa_chinensis RchiOBHm_Chr1g0313651 RchiOBHm_Chr1g0322021 RchiOBHm_Chr1g0322871 RchiOBHm_Chr1g0322881 RchiOBHm_Chr1g0378031 RchiOBHm_Chr2g0146721 RchiOBHm_Chr4g0394571 RchiOBHm_Chr4g0444661
rosa_laevigata RLG00000009689 RLG00000014710 RLG00000020215 RLG00000028674 RLG00000030393
rosa_multiflora Rmu_sc0001168.1_g000008 Rmu_sc0001168.1_g000019 Rmu_sc0001986.1_g000042 Rmu_sc0005424.1_g000018
rosa_roxburghii Rroxscaffold_1G00066950 Rroxscaffold_4G00308160 Rroxscaffold_4G00327340 Rroxscaffold_4G00331500 Rroxscaffold_5G00339610 Rroxscaffold_5G00370190 Rroxscaffold_6G00400520 Rroxscaffold_7G00188200
rosa_rugosa Rorug01G0035100 Rorug01G0035200 Rorug01G0131800.1 Rorug01G0193700 Rorug03G0291700 Rorug03G0291800 Rorug03G0291800 Rorug03G0291900 Rorug03G0364400.1 Rorug04G0439300 Rorug04G0439400 Rorug05G0543000 Rorug07G0306800
rosa_samantha Rh1AG048400 Rh1AG309400 Rh1AG358100 Rh1AG424800 Rh1BG046200 Rh1CG052500 Rh1DG056700 Rh2AG452600 Rh2BG465300 Rh2CG439500 Rh2DG245700 Rh2DG245800 Rh2DG474300 Rh4AG053000 Rh4BG050900 Rh4CG057700 Rh4DG049700 Rh5BG052500 Rh5DG543800 Rh6DG164300 Rh7AG422900 Rh7BG328900
rosa_wichuraiana Rw1G004380 Rw4G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1246
Acc65I GGTACC 1 cut(s) 127
AccB1I GGYRCC 2 cut(s) 127, 149
AccBSI CCGCTC 1 cut(s) 1087
AccI GTMKAC 1 cut(s) 305
AciI CCGC 3 cut(s) 92, 124, 1085
AclWI GGATC 2 cut(s) 270, 1008
AcoI YGGCCR 1 cut(s) 864
AcsI RAATTY 2 cut(s) 668, 1043
AcuI CTGAAG 3 cut(s) 501, 548, 1011
AfaI GTAC 4 cut(s) 129, 663, 945, 1184
AfiI CCNNNNNNNGG 2 cut(s) 628, 1244
AflIII ACRYGT 2 cut(s) 300, 1179
AgsI TTSAA 5 cut(s) 298, 513, 545, 654, 898
AjiI CACGTC 1 cut(s) 10
AjnI CCWGG 1 cut(s) 18
Alw21I GWGCWC 4 cut(s) 339, 392, 615, 730
AlwI GGATC 2 cut(s) 270, 1008
AlwNI CAGNNNCTG 1 cut(s) 446
AoxI GGCC 3 cut(s) 72, 742, 864
ApoI RAATTY 2 cut(s) 668, 1043
Asp700I GAANNNNTTC 2 cut(s) 29, 99
Asp718I GGTACC 1 cut(s) 127
AspLEI GCGC 2 cut(s) 851, 919
AspS9I GGNCC 3 cut(s) 105, 742, 1225
AsuHPI GGTGA 4 cut(s) 34, 344, 485, 611
AvaII GGWCC 2 cut(s) 105, 1225
BaeGI GKGCMC 1 cut(s) 971
BalI TGGCCA 1 cut(s) 866
BanI GGYRCC 2 cut(s) 127, 149
BanII GRGCYC 2 cut(s) 68, 730
BbsI GAAGAC 1 cut(s) 1240
Bbv12I GWGCWC 4 cut(s) 339, 392, 615, 730
BccI CCATC 5 cut(s) 323, 354, 412, 753, 1180
BceAI ACGGC 2 cut(s) 105, 914
BciT130I CCWGG 1 cut(s) 20
BciVI GTATCC 1 cut(s) 987
BclI TGATCA 1 cut(s) 792
BfaI CTAG 1 cut(s) 752
BfmI CTRYAG 2 cut(s) 276, 1242
BfoI RGCGCY 1 cut(s) 852
BfuAI ACCTGC 1 cut(s) 1246
BfuI GTATCC 1 cut(s) 987
BglI GCCNNNNNGGC 1 cut(s) 602
BmcAI AGTACT 1 cut(s) 663
Bme1390I CCNGG 1 cut(s) 20
Bme18I GGWCC 2 cut(s) 105, 1225
BmgBI CACGTC 1 cut(s) 10
BmgT120I GGNCC 3 cut(s) 105, 742, 1225
BmiI GGNNCC 2 cut(s) 129, 151
BmrFI CCNGG 1 cut(s) 20
BmsI GCATC 2 cut(s) 151, 427
BpiI GAAGAC 1 cut(s) 1240
BpuEI CTTGAG 1 cut(s) 443
BsaJI CCNNGG 2 cut(s) 18, 731
BsaWI WCCGGW 1 cut(s) 349
Bsc4I CCNNNNNNNGG 2 cut(s) 628, 1244
Bse118I RCCGGY 2 cut(s) 950, 1185
Bse1I ACTGG 1 cut(s) 669
BseBI CCWGG 1 cut(s) 20
BseDI CCNNGG 2 cut(s) 18, 731
BseGI GGATG 1 cut(s) 346
BseLI CCNNNNNNNGG 2 cut(s) 628, 1244
BseMII CTCAG 1 cut(s) 1014
BseNI ACTGG 1 cut(s) 669
BseRI GAGGAG 1 cut(s) 272
BseSI GKGCMC 1 cut(s) 971
BseYI CCCAGC 1 cut(s) 290
BsgI GTGCAG 1 cut(s) 227
BshFI GGCC 3 cut(s) 74, 744, 866
BshNI GGYRCC 2 cut(s) 127, 149
BsiHKAI GWGCWC 4 cut(s) 339, 392, 615, 730
BsiSI CCGG 3 cut(s) 350, 951, 1186
BslFI GGGAC 1 cut(s) 917
BslI CCNNNNNNNGG 2 cut(s) 628, 1244
BsmFI GGGAC 1 cut(s) 917
BsmI GAATGC 1 cut(s) 13
BsnI GGCC 3 cut(s) 74, 744, 866
Bsp1286I GDGCHC 6 cut(s) 68, 339, 392, 615, 730, 971
Bsp143I GATC 4 cut(s) 262, 698, 792, 1013
BspACI CCGC 3 cut(s) 92, 124, 1085
BspANI GGCC 3 cut(s) 74, 744, 866
BspCNI CTCAG 1 cut(s) 1015
BspLI GGNNCC 2 cut(s) 129, 151
BspMI ACCTGC 1 cut(s) 1246
BspPI GGATC 2 cut(s) 270, 1008
BspT107I GGYRCC 2 cut(s) 127, 149
BsrBI CCGCTC 1 cut(s) 1087
BsrFI RCCGGY 2 cut(s) 950, 1185
BsrI ACTGG 1 cut(s) 669
BssAI RCCGGY 2 cut(s) 950, 1185
BssECI CCNNGG 2 cut(s) 18, 731
BssMI GATC 4 cut(s) 262, 698, 792, 1013
BssT1I CCWWGG 1 cut(s) 731
Bst2UI CCWGG 1 cut(s) 20
Bst4CI ACNGT 2 cut(s) 310, 661
BstAPI GCANNNNNTGC 1 cut(s) 812
BstC8I GCNNGC 4 cut(s) 213, 603, 927, 952
BstDEI CTNAG 1 cut(s) 1023
BstENI CCTNNNNNAGG 1 cut(s) 1242
BstF5I GGATG 1 cut(s) 346
BstH2I RGCGCY 1 cut(s) 852
BstHHI GCGC 2 cut(s) 851, 919
BstKTI GATC 4 cut(s) 265, 701, 795, 1016
BstMBI GATC 4 cut(s) 262, 698, 792, 1013
BstNI CCWGG 1 cut(s) 20
BstNSI RCATGY 4 cut(s) 304, 433, 929, 1183
BstSCI CCNGG 1 cut(s) 18
BstSFI CTRYAG 2 cut(s) 276, 1242
BstSLI GKGCMC 1 cut(s) 971
BstV2I GAAGAC 1 cut(s) 1240
BstX2I RGATCY 2 cut(s) 262, 1013
BstYI RGATCY 2 cut(s) 262, 1013
BsuI GTATCC 1 cut(s) 987
BsuRI GGCC 3 cut(s) 74, 744, 866
BtgZI GCGATG 1 cut(s) 1177
BtrI CACGTC 1 cut(s) 10
BtsCI GGATG 1 cut(s) 346
BtsI GCAGTG 2 cut(s) 392, 1074
BtsIMutI CAGTG 4 cut(s) 392, 795, 1074, 1149
BveI ACCTGC 1 cut(s) 1246
Cac8I GCNNGC 4 cut(s) 213, 603, 927, 952
CaiI CAGNNNCTG 1 cut(s) 446
CfoI GCGC 2 cut(s) 851, 919
Cfr10I RCCGGY 2 cut(s) 950, 1185
Cfr13I GGNCC 3 cut(s) 105, 742, 1225
CpoI CGGWCCG 1 cut(s) 105
CseI GACGC 1 cut(s) 386
Csp6I GTAC 4 cut(s) 128, 662, 944, 1183
CspCI CAANNNNNGTGG 2 cut(s) 390, 425
CspI CGGWCCG 1 cut(s) 105
CviQI GTAC 4 cut(s) 128, 662, 944, 1183
DdeI CTNAG 1 cut(s) 1023
DpnI GATC 4 cut(s) 264, 700, 794, 1015
DpnII GATC 4 cut(s) 262, 698, 792, 1013
EaeI YGGCCR 1 cut(s) 864
EciI GGCGGA 1 cut(s) 107
Ecl136II GAGCTC 1 cut(s) 728
Eco130I CCWWGG 1 cut(s) 731
Eco24I GRGCYC 2 cut(s) 68, 730
Eco32I GATATC 1 cut(s) 822
Eco47I GGWCC 2 cut(s) 105, 1225
Eco53kI GAGCTC 1 cut(s) 728
Eco57I CTGAAG 3 cut(s) 501, 548, 1011
EcoICRI GAGCTC 1 cut(s) 728
EcoNI CCTNNNNNAGG 1 cut(s) 1242
EcoRI GAATTC 1 cut(s) 1043
EcoRII CCWGG 1 cut(s) 18
EcoRV GATATC 1 cut(s) 822
EcoT14I CCWWGG 1 cut(s) 731
EcoT38I GRGCYC 2 cut(s) 68, 730
ErhI CCWWGG 1 cut(s) 731
FalI AAGNNNNNCTT 2 cut(s) 1003, 1035
FaqI GGGAC 1 cut(s) 917
FauI CCCGC 2 cut(s) 117, 1092
FbaI TGATCA 1 cut(s) 792
FblI GTMKAC 1 cut(s) 305
FokI GGATG 1 cut(s) 333
FriOI GRGCYC 2 cut(s) 68, 730
FspBI CTAG 1 cut(s) 752
GlaI GCGC 2 cut(s) 850, 918
GsaI CCCAGC 1 cut(s) 294
HaeII RGCGCY 1 cut(s) 852
HaeIII GGCC 3 cut(s) 74, 744, 866
HapII CCGG 3 cut(s) 350, 951, 1186
HgaI GACGC 1 cut(s) 386
HhaI GCGC 2 cut(s) 851, 919
Hin6I GCGC 2 cut(s) 849, 917
HinP1I GCGC 2 cut(s) 849, 917
HincII GTYRAC 1 cut(s) 306
HindII GTYRAC 1 cut(s) 306
HindIII AAGCTT 2 cut(s) 41, 1130
HinfI GANTC 2 cut(s) 476, 800
HpaII CCGG 3 cut(s) 350, 951, 1186
HphI GGTGA 4 cut(s) 34, 344, 485, 611
Hpy166II GTNNAC 3 cut(s) 306, 401, 832
Hpy188I TCNGA 4 cut(s) 481, 522, 1024, 1051
Hpy188III TCNNGA 4 cut(s) 422, 513, 825, 989
Hpy8I GTNNAC 3 cut(s) 306, 401, 832
HpyAV CCTTC 2 cut(s) 1029, 1100
HpyCH4III ACNGT 2 cut(s) 310, 661
HpyCH4IV ACGT 2 cut(s) 9, 52
HpyF3I CTNAG 1 cut(s) 1023
HpySE526I ACGT 2 cut(s) 9, 52
HspAI GCGC 2 cut(s) 849, 917
KpnI GGTACC 1 cut(s) 131
KroI GCCGGC 1 cut(s) 950
KroNI GCCGGC 1 cut(s) 952
Ksp22I TGATCA 1 cut(s) 792
Kzo9I GATC 4 cut(s) 262, 698, 792, 1013
LmnI GCTCC 5 cut(s) 181, 387, 725, 733, 1092
LweI GCATC 2 cut(s) 151, 427
MaeI CTAG 1 cut(s) 752
MaeII ACGT 2 cut(s) 9, 52
MalI GATC 4 cut(s) 264, 700, 794, 1015
MbiI CCGCTC 1 cut(s) 1087
MboI GATC 4 cut(s) 262, 698, 792, 1013
MboII GAAGA 5 cut(s) 335, 453, 494, 740, 1245
MflI RGATCY 2 cut(s) 262, 1013
MhlI GDGCHC 6 cut(s) 68, 339, 392, 615, 730, 971
MlsI TGGCCA 1 cut(s) 866
MluCI AATT 4 cut(s) 95, 668, 761, 1043
MluNI TGGCCA 1 cut(s) 866
MmeI TCCRAC 2 cut(s) 500, 1252
Mox20I TGGCCA 1 cut(s) 866
MroNI GCCGGC 1 cut(s) 950
MroXI GAANNNNTTC 2 cut(s) 29, 99
MscI TGGCCA 1 cut(s) 866
MseI TTAA 4 cut(s) 45, 168, 638, 1010
MslI CAYNNNNRTG 1 cut(s) 624
Msp20I TGGCCA 1 cut(s) 866
MspA1I CMGCKG 4 cut(s) 124, 187, 281, 446
MspI CCGG 3 cut(s) 350, 951, 1186
MspR9I CCNGG 1 cut(s) 20
Mva1269I GAATGC 1 cut(s) 13
MvaI CCWGG 1 cut(s) 20
NaeI GCCGGC 1 cut(s) 952
NdeII GATC 4 cut(s) 262, 698, 792, 1013
NgoMIV GCCGGC 1 cut(s) 950
NlaIV GGNNCC 2 cut(s) 129, 151
NmeAIII GCCGAG 1 cut(s) 622
NspI RCATGY 4 cut(s) 304, 433, 929, 1183
PaeI GCATGC 1 cut(s) 929
PciI ACATGT 2 cut(s) 300, 1179
PctI GAATGC 1 cut(s) 13
PdiI GCCGGC 1 cut(s) 952
PdmI GAANNNNTTC 2 cut(s) 29, 99
PfeI GAWTC 2 cut(s) 476, 800
PscI ACATGT 2 cut(s) 300, 1179
Psp124BI GAGCTC 1 cut(s) 730
Psp6I CCWGG 1 cut(s) 18
PspFI CCCAGC 1 cut(s) 290
PspGI CCWGG 1 cut(s) 18
PspN4I GGNNCC 2 cut(s) 129, 151
PspPI GGNCC 3 cut(s) 105, 742, 1225
PstNI CAGNNNCTG 1 cut(s) 446
PsuI RGATCY 2 cut(s) 262, 1013
PvuII CAGCTG 3 cut(s) 187, 281, 446
RsaI GTAC 4 cut(s) 129, 663, 945, 1184
RsaNI GTAC 4 cut(s) 128, 662, 944, 1183
RseI CAYNNNNRTG 1 cut(s) 624
Rsr2I CGGWCCG 1 cut(s) 105
RsrII CGGWCCG 1 cut(s) 105
SacI GAGCTC 1 cut(s) 730
SalI GTCGAC 1 cut(s) 304
SaqAI TTAA 4 cut(s) 45, 168, 638, 1010
Sau3AI GATC 4 cut(s) 262, 698, 792, 1013
Sau96I GGNCC 3 cut(s) 105, 742, 1225
ScaI AGTACT 1 cut(s) 663
ScrFI CCNGG 1 cut(s) 20
SduI GDGCHC 6 cut(s) 68, 339, 392, 615, 730, 971
SfaNI GCATC 2 cut(s) 151, 427
SfcI CTRYAG 2 cut(s) 276, 1242
SinI GGWCC 2 cut(s) 105, 1225
SmiMI CAYNNNNRTG 1 cut(s) 624
SmlI CTYRAG 1 cut(s) 422
SmoI CTYRAG 1 cut(s) 422
SphI GCATGC 1 cut(s) 929
Sse9I AATT 4 cut(s) 95, 668, 761, 1043
SsiI CCGC 3 cut(s) 92, 124, 1085
SspI AATATT 2 cut(s) 58, 226
SspMI CTAG 1 cut(s) 752
SstI GAGCTC 1 cut(s) 730
StyD4I CCNGG 1 cut(s) 18
StyI CCWWGG 1 cut(s) 731
TaaI ACNGT 2 cut(s) 310, 661
TaiI ACGT 2 cut(s) 12, 55
TaqI TCGA 1 cut(s) 305
TaqII GACCGA 1 cut(s) 93
TasI AATT 4 cut(s) 95, 668, 761, 1043
TatI WGTACW 2 cut(s) 661, 943
TfiI GAWTC 2 cut(s) 476, 800
Tru1I TTAA 4 cut(s) 45, 168, 638, 1010
Tru9I TTAA 4 cut(s) 45, 168, 638, 1010
TscAI CASTG 4 cut(s) 399, 802, 1081, 1156
TspDTI ATGAA 6 cut(s) 105, 336, 453, 570, 600, 1082
TspGWI ACGGA 1 cut(s) 97
TspRI CASTG 4 cut(s) 399, 802, 1081, 1156
VpaK11BI GGWCC 2 cut(s) 105, 1225
XagI CCTNNNNNAGG 1 cut(s) 1242
XapI RAATTY 2 cut(s) 668, 1043
XceI RCATGY 4 cut(s) 304, 433, 929, 1183
XcmI CCANNNNNNNNNTGG 1 cut(s) 832
XmiI GTMKAC 1 cut(s) 305
XmnI GAANNNNTTC 2 cut(s) 29, 99
XspI CTAG 1 cut(s) 752
ZrmI AGTACT 1 cut(s) 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.