Prupe.5G153300_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
13796776 .. 13797065
290 bp
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UTR
Exon/CDS
Intron
Prupe.5G153300.1

Sequence Viewer

Length: 225 bp
ATGGGTCAACTCATCTGGCAGGGTTGGCAGTTGCAATCTGCTGACTCGCCCATTCCAAGTTGTGAGTTGGGTCATGTGGTCCATGCGAAGGCTTGGGCTGCGTGTCTCTTAGACCGGAGGGTACAGCGTGAGGCTGGTTTCACAGAGCAGCGAAAACCTCCCGCTCACGGCAGTGGAAGGATAACGGGTCGGTGCTCCACCAACCCAAATTGCCTGATGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

75

Amino Acids

8.11

Weight (kDa)

8.94

Isoelectric Point (pI)

54.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 164
AciI CCGC 1 cut(s) 162
AfaI GTAC 1 cut(s) 123
AfiI CCNNNNNNNGG 2 cut(s) 88, 167
AleI CACNNNNGTG 1 cut(s) 171
Alw21I GWGCWC 1 cut(s) 197
Alw26I GTCTC 1 cut(s) 110
ApeKI GCWGC 2 cut(s) 98, 148
AspS9I GGNCC 1 cut(s) 79
AvaII GGWCC 1 cut(s) 79
Bbv12I GWGCWC 1 cut(s) 197
BbvI GCAGC 2 cut(s) 85, 160
BccI CCATC 1 cut(s) 211
BceAI ACGGC 1 cut(s) 184
BcoDI GTCTC 1 cut(s) 110
BisI GCNGC 2 cut(s) 99, 149
BlsI GCNGC 2 cut(s) 100, 150
Bme18I GGWCC 1 cut(s) 79
BmgT120I GGNCC 1 cut(s) 79
BsaWI WCCGGW 1 cut(s) 114
Bsc4I CCNNNNNNNGG 2 cut(s) 88, 167
BseLI CCNNNNNNNGG 2 cut(s) 88, 167
BseXI GCAGC 2 cut(s) 85, 160
BsiHKAI GWGCWC 1 cut(s) 197
BsiSI CCGG 1 cut(s) 115
BslI CCNNNNNNNGG 2 cut(s) 88, 167
BsmAI GTCTC 1 cut(s) 110
Bsp1286I GDGCHC 1 cut(s) 197
BspACI CCGC 1 cut(s) 162
BsrBI CCGCTC 1 cut(s) 164
BstDEI CTNAG 1 cut(s) 109
BstMAI GTCTC 1 cut(s) 110
BstMWI GCNNNNNNNGC 2 cut(s) 25, 98
BstV1I GCAGC 2 cut(s) 85, 160
BtsI GCAGTG 1 cut(s) 178
BtsIMutI CAGTG 1 cut(s) 178
Cfr13I GGNCC 1 cut(s) 79
Csp6I GTAC 1 cut(s) 122
CviAII CATG 2 cut(s) 74, 83
CviJI RGCY 3 cut(s) 92, 98, 134
CviKI_1 RGCY 3 cut(s) 92, 98, 134
CviQI GTAC 1 cut(s) 122
DdeI CTNAG 1 cut(s) 109
Eco47I GGWCC 1 cut(s) 79
FaeI CATG 2 cut(s) 77, 86
FaiI YATR 2 cut(s) 75, 84
FatI CATG 2 cut(s) 73, 82
FauI CCCGC 1 cut(s) 169
Fnu4HI GCNGC 2 cut(s) 99, 149
Fsp4HI GCNGC 2 cut(s) 99, 149
GluI GCNGC 2 cut(s) 99, 149
HapII CCGG 1 cut(s) 115
Hin1II CATG 2 cut(s) 77, 86
HincII GTYRAC 1 cut(s) 8
HindII GTYRAC 1 cut(s) 8
HinfI GANTC 1 cut(s) 44
HpaII CCGG 1 cut(s) 115
Hpy166II GTNNAC 1 cut(s) 8
Hpy8I GTNNAC 1 cut(s) 8
HpyAV CCTTC 2 cut(s) 82, 171
HpyCH4V TGCA 1 cut(s) 34
HpyF10VI GCNNNNNNNGC 2 cut(s) 25, 98
HpyF3I CTNAG 1 cut(s) 109
Hsp92II CATG 2 cut(s) 77, 86
LmnI GCTCC 1 cut(s) 200
LpnPI CCDG 3 cut(s) 5, 120, 128
Lsp1109I GCAGC 2 cut(s) 85, 160
MbiI CCGCTC 1 cut(s) 164
MhlI GDGCHC 1 cut(s) 197
MluCI AATT 1 cut(s) 208
MlyI GAGTC 1 cut(s) 38
MnlI CCTC 3 cut(s) 111, 124, 168
MslI CAYNNNNRTG 1 cut(s) 171
MspI CCGG 1 cut(s) 115
MwoI GCNNNNNNNGC 2 cut(s) 25, 98
NlaIII CATG 2 cut(s) 77, 86
OliI CACNNNNGTG 1 cut(s) 171
PkrI GCNGC 2 cut(s) 100, 150
PleI GAGTC 1 cut(s) 38
PpsI GAGTC 1 cut(s) 38
PspPI GGNCC 1 cut(s) 79
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
RseI CAYNNNNRTG 1 cut(s) 171
SatI GCNGC 2 cut(s) 99, 149
Sau96I GGNCC 1 cut(s) 79
SchI GAGTC 1 cut(s) 38
SduI GDGCHC 1 cut(s) 197
SetI ASST 1 cut(s) 160
SinI GGWCC 1 cut(s) 79
SmiMI CAYNNNNRTG 1 cut(s) 171
Sse9I AATT 1 cut(s) 208
SsiI CCGC 1 cut(s) 162
TasI AATT 1 cut(s) 208
TscAI CASTG 1 cut(s) 178
TseI GCWGC 2 cut(s) 98, 148
TspRI CASTG 1 cut(s) 178
VpaK11BI GGWCC 1 cut(s) 79
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.