Rh6AG117400

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
17671322 .. 17671687
366 bp
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UTR
Exon/CDS
Intron
Rh6AG117400.1

Sequence Viewer

Length: 366 bp
ATGGTGACCTCTACTGAGGAGAAGGATGAAGACGAAGCTTCAGTGGCTCAAGAATCCACCACCTCTTCACAAAGAGTTATCATACGGGAAGGTCAAAACATCGACCCAAAGCAAATAGCTGAAGGGGTAATCAAGGCCCTCGATGCACCATCAAAGCACGCAGGGAGGCCAAAGGGGGCTAGAAACAAAGAGTATTCGGTTTTTAAAGATGACACTTACTCGGGGCCAGTCACCAGCAACAAGGCTCACAAAATGACACCTAGAGATGCTTCTTCAGTGGGTACTGCATCAGAAGATGAGGGACAAATGTGGAAAGATAATCCATTCTATGAGACATCTGAAATAGAAAGGGTGTCCCATCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.36

Weight (kDa)

5.07

Isoelectric Point (pI)

49.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 3 cut(s) 24, 141, 258
AfaI GTAC 1 cut(s) 283
AluBI AGCT 2 cut(s) 38, 119
AluI AGCT 2 cut(s) 38, 119
Alw26I GTCTC 1 cut(s) 326
Ama87I CYCGRG 1 cut(s) 220
AoxI GGCC 3 cut(s) 135, 167, 224
AspS9I GGNCC 2 cut(s) 136, 224
AsuHPI GGTGA 2 cut(s) 16, 223
AvaI CYCGRG 1 cut(s) 220
BbsI GAAGAC 1 cut(s) 36
BccI CCATC 1 cut(s) 157
BcoDI GTCTC 1 cut(s) 326
BfaI CTAG 2 cut(s) 180, 261
BmeT110I CYCGRG 1 cut(s) 220
BmgT120I GGNCC 2 cut(s) 136, 224
BmiI GGNNCC 1 cut(s) 225
BmsI GCATC 3 cut(s) 133, 256, 296
BpiI GAAGAC 1 cut(s) 36
BpuEI CTTGAG 1 cut(s) 33
Bse1I ACTGG 1 cut(s) 227
BseGI GGATG 1 cut(s) 31
BseMII CTCAG 1 cut(s) 6
BseNI ACTGG 1 cut(s) 227
BseRI GAGGAG 1 cut(s) 32
BshFI GGCC 3 cut(s) 137, 169, 226
BsiHKCI CYCGRG 1 cut(s) 220
BslFI GGGAC 2 cut(s) 315, 340
BsmAI GTCTC 1 cut(s) 326
BsmFI GGGAC 2 cut(s) 315, 340
BsnI GGCC 3 cut(s) 137, 169, 226
BsoBI CYCGRG 1 cut(s) 220
BspANI GGCC 3 cut(s) 137, 169, 226
BspCNI CTCAG 1 cut(s) 7
BspLI GGNNCC 1 cut(s) 225
BsrI ACTGG 1 cut(s) 227
Bst6I CTCTTC 1 cut(s) 70
BstC8I GCNNGC 1 cut(s) 159
BstDEI CTNAG 1 cut(s) 15
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 1 cut(s) 31
BstMAI GTCTC 1 cut(s) 326
BstMWI GCNNNNNNNGC 2 cut(s) 44, 143
BstPI GGTNACC 1 cut(s) 4
BstV2I GAAGAC 1 cut(s) 36
BsuRI GGCC 3 cut(s) 137, 169, 226
BtsCI GGATG 1 cut(s) 31
BtsIMutI CAGTG 2 cut(s) 48, 282
Cac8I GCNNGC 1 cut(s) 159
Cfr13I GGNCC 2 cut(s) 136, 224
Csp6I GTAC 1 cut(s) 282
CviJI RGCY 8 cut(s) 38, 47, 119, 137, 169, 179, 226, 245
CviKI_1 RGCY 8 cut(s) 38, 47, 119, 137, 169, 179, 226, 245
CviQI GTAC 1 cut(s) 282
DdeI CTNAG 1 cut(s) 15
DraI TTTAAA 1 cut(s) 205
Eam1104I CTCTTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 70
Eco57I CTGAAG 3 cut(s) 24, 141, 258
Eco88I CYCGRG 1 cut(s) 220
Eco91I GGTNACC 1 cut(s) 4
EcoO109I RGGNCCY 1 cut(s) 136
EcoO65I GGTNACC 1 cut(s) 4
FaiI YATR 2 cut(s) 83, 330
FaqI GGGAC 2 cut(s) 315, 340
FokI GGATG 1 cut(s) 38
FspBI CTAG 2 cut(s) 180, 261
HaeIII GGCC 3 cut(s) 137, 169, 226
HindIII AAGCTT 1 cut(s) 36
HinfI GANTC 1 cut(s) 53
HphI GGTGA 2 cut(s) 16, 223
Hpy188I TCNGA 2 cut(s) 292, 340
Hpy188III TCNNGA 1 cut(s) 50
HpyAV CCTTC 3 cut(s) 16, 83, 116
HpyCH4V TGCA 2 cut(s) 146, 287
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 143
HpyF3I CTNAG 1 cut(s) 15
LpnPI CCDG 3 cut(s) 147, 240, 247
LweI GCATC 3 cut(s) 133, 256, 296
MaeI CTAG 2 cut(s) 180, 261
MaeIII GTNAC 2 cut(s) 4, 229
MboII GAAGA 4 cut(s) 41, 57, 264, 305
MnlI CCTC 6 cut(s) 10, 19, 73, 149, 159, 292
MseI TTAA 1 cut(s) 204
MwoI GCNNNNNNNGC 2 cut(s) 44, 143
NlaIV GGNNCC 1 cut(s) 225
NmuCI GTSAC 2 cut(s) 4, 229
PfeI GAWTC 1 cut(s) 53
PspEI GGTNACC 1 cut(s) 4
PspN4I GGNNCC 1 cut(s) 225
PspPI GGNCC 2 cut(s) 136, 224
RsaI GTAC 1 cut(s) 283
RsaNI GTAC 1 cut(s) 282
SaqAI TTAA 1 cut(s) 204
Sau96I GGNCC 2 cut(s) 136, 224
SetI ASST 6 cut(s) 11, 40, 65, 94, 121, 262
SfaNI GCATC 3 cut(s) 133, 256, 296
SmlI CTYRAG 1 cut(s) 48
SmoI CTYRAG 1 cut(s) 48
SspMI CTAG 2 cut(s) 180, 261
TaqI TCGA 2 cut(s) 102, 141
TfiI GAWTC 1 cut(s) 53
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TscAI CASTG 2 cut(s) 48, 282
TseFI GTSAC 2 cut(s) 4, 229
Tsp45I GTSAC 2 cut(s) 4, 229
TspDTI ATGAA 1 cut(s) 42
TspRI CASTG 2 cut(s) 48, 282
XspI CTAG 2 cut(s) 180, 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.