Prupe.7G008700_v2.0.a1

Stellacyanin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000318
Physical Location & Seq
Reverse (-)
1191874 .. 1192436
563 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G008700.1

Sequence Viewer

Length: 471 bp
ATGGCATGGAATAAATTTGTCACCCTTATCACCATCCTTGTGGTTCTTCTTCCGACAATCGCCATGGCGAAAGAATTCGTCGTCGGAGATGACAGCGGCTGGAAAACTAATTTTGACTACGAAGCTTGGGCCAAAGACAAAGTATTTCGTGTTGGTGATACACTAGTGTTCAATTACAAGGCTCCTAATCACAATGTGTTCAAGGTGAACGGAACTGGGTTCAAGGAATGCATTAAGCCAACAGAAAACGAAGCACCACTTTCCAGTGGAAATGACAAAATAGACCTAAATATCTCTGGAAATAAATGGTACATTTGTTCTGTTAAGAATCATTGTGATTTGGGCATGAAGCTCTTCATTACCGTCTCCGATGAGTCGTCCGCTGTTCGTGGCATCACATTATCTGGTTCATATCAAGCTTTCATGGCCGTCATCACGGCTATCCACATAATACAATCAGTAATTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu_bind_like

Protein Analysis

157

Amino Acids

17.31

Weight (kDa)

6.81

Isoelectric Point (pI)

27.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000318)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17675
fragaria_vesca FvH4_4g34040 FvH4_5g01010 FvH4_5g01020 FvH4_5g01030 FvH4_5g01040 FvH4_6g39940
malus_domestica MD04G1075600.v1.1 MD04G1075800.v1.1 MD04G1075900.v1.1 MD06G1068300.v1.1 MD12G1007700.v1.1 MD12G1007800.v1.1 MD12G1007900.v1.1 MD14G1005400.v1.1
prunus_persica Prupe.5G084000_v2.0.a1 Prupe.5G084100_v2.0.a1 Prupe.5G084200_v2.0.a1 Prupe.5G084400_v2.0.a1 Prupe.7G008700_v2.0.a1 Prupe.7G009100_v2.0.a1
pyrus_communis pycom04g06640 pycom04g06650 pycom06g06620
rosa_chinensis RchiOBHm_Chr2g0154451 RchiOBHm_Chr2g0154471 RchiOBHm_Chr4g0443531 RchiOBHm_Chr7g0200311 RchiOBHm_Chr7g0200321 RchiOBHm_Chr7g0200341 RchiOBHm_Chr7g0200371
rosa_laevigata RLG00000003732 RLG00000003733 RLG00000003734 RLG00000003735 RLG00000003736 RLG00000003737 RLG00000005919 RLG00000020779
rosa_multiflora Rmu_co8434485.1_g000001 Rmu_sc0000648.1_g000005 Rmu_sc0001118.1_g000024 Rmu_sc0003808.1_g000012 Rmu_sc0005350.1_g000004 Rmu_sc0005350.1_g000005 Rmu_sc0005350.1_g000009 Rmu_sc0005350.1_g000010 Rmu_sc0005350.1_g000011 Rmu_sc0006475.1_g000003
rosa_roxburghii Rroxscaffold_2G00094310 Rroxscaffold_2G00094320 Rroxscaffold_3G00256060 Rroxscaffold_3G00256070 Rroxscaffold_3G00256090 Rroxscaffold_3G00256100 Rroxscaffold_3G00256110 Rroxscaffold_3G00256150 Rroxscaffold_3G00256160 Rroxscaffold_5G00384080
rosa_rugosa Rorug02G0444500 Rorug02G0444600 Rorug04G0347000 Rorug07G0059100 Rorug07G0059200 Rorug07G0059300 Rorug07G0059400 Rorug07G0059500 Rorug07G0059600 Rorug07G0059700 Rorug07G0059800
rosa_samantha Rh2AG509000 Rh2AG509100 Rh2BG520300 Rh2BG520400 Rh2CG494400 Rh2CG494500 Rh2DG530600 Rh2DG530700 Rh4AG402700 Rh4BG414400 Rh4CG430000 Rh4DG409900 Rh4DG411200 Rh7AG184500 Rh7AG184600 Rh7AG184700 Rh7AG184800 Rh7AG184900 Rh7AG185000 Rh7BG187200 Rh7BG187300 Rh7BG187400 Rh7BG187800 Rh7BG187900 Rh7BG188000 Rh7BG188100 Rh7CG194900 Rh7CG195000 Rh7CG195100 Rh7CG195200 Rh7CG195300 Rh7DG188500 Rh7DG188600 Rh7DG188700 Rh7DG188800 Rh7DG188900 Rh7DG189100
rosa_wichuraiana Rw2G041800 Rw2G041810 Rw4G034720 Rw7G016160 Rw7G016170 Rw7G016180 Rw7G016190 Rw7G016200 Rw7G016210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 96, 381
AcoI YGGCCR 1 cut(s) 426
AcsI RAATTY 2 cut(s) 14, 74
AdeI CACNNNGTG 1 cut(s) 196
AfaI GTAC 1 cut(s) 311
AgsI TTSAA 3 cut(s) 172, 202, 223
AhlI ACTAGT 1 cut(s) 163
AluBI AGCT 3 cut(s) 125, 352, 419
AluI AGCT 3 cut(s) 125, 352, 419
Alw26I GTCTC 1 cut(s) 370
AlwNI CAGNNNCTG 1 cut(s) 99
AoxI GGCC 2 cut(s) 129, 426
ApoI RAATTY 2 cut(s) 14, 74
AseI ATTAAT 1 cut(s) 465
Asp700I GAANNNNTTC 2 cut(s) 74, 353
AspS9I GGNCC 1 cut(s) 129
AsuHPI GGTGA 4 cut(s) 13, 22, 167, 217
BaeI ACNNNNGTAYC 4 cut(s) 150, 183, 301, 334
BccI CCATC 1 cut(s) 41
BceAI ACGGC 2 cut(s) 413, 453
BcoDI GTCTC 1 cut(s) 370
BcuI ACTAGT 1 cut(s) 163
BfaI CTAG 1 cut(s) 164
BisI GCNGC 1 cut(s) 97
BlsI GCNGC 1 cut(s) 98
BmgT120I GGNCC 1 cut(s) 129
BmiI GGNNCC 1 cut(s) 183
BmrI ACTGGG 1 cut(s) 225
BmsI GCATC 1 cut(s) 402
BmuI ACTGGG 1 cut(s) 225
BsaJI CCNNGG 1 cut(s) 63
Bse1I ACTGG 2 cut(s) 220, 264
BseDI CCNNGG 1 cut(s) 63
BseGI GGATG 1 cut(s) 33
BseNI ACTGG 2 cut(s) 220, 264
BshFI GGCC 2 cut(s) 131, 428
BsmAI GTCTC 1 cut(s) 370
BsmBI CGTCTC 1 cut(s) 370
BsmI GAATGC 1 cut(s) 233
BsnI GGCC 2 cut(s) 131, 428
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 2 cut(s) 96, 381
BspANI GGCC 2 cut(s) 131, 428
BspLI GGNNCC 1 cut(s) 183
BspQI GCTCTTC 1 cut(s) 359
BsrI ACTGG 2 cut(s) 220, 264
BssECI CCNNGG 1 cut(s) 63
BssT1I CCWWGG 1 cut(s) 63
Bst4CI ACNGT 1 cut(s) 364
Bst6I CTCTTC 1 cut(s) 359
BstDSI CCRYGG 1 cut(s) 63
BstF5I GGATG 1 cut(s) 33
BstMAI GTCTC 1 cut(s) 370
BstMWI GCNNNNNNNGC 1 cut(s) 425
BstXI CCANNNNNNTGG 1 cut(s) 40
BsuRI GGCC 2 cut(s) 131, 428
BtgI CCRYGG 1 cut(s) 63
BtsCI GGATG 1 cut(s) 33
BtsIMutI CAGTG 1 cut(s) 271
CaiI CAGNNNCTG 1 cut(s) 99
Cfr13I GGNCC 1 cut(s) 129
Csp6I GTAC 1 cut(s) 310
CviAII CATG 4 cut(s) 6, 64, 346, 424
CviJI RGCY 9 cut(s) 99, 125, 131, 182, 238, 352, 419, 428, 440
CviKI_1 RGCY 9 cut(s) 99, 125, 131, 182, 238, 352, 419, 428, 440
CviQI GTAC 1 cut(s) 310
DraIII CACNNNGTG 1 cut(s) 196
EaeI YGGCCR 1 cut(s) 426
Eam1104I CTCTTC 1 cut(s) 359
EarI CTCTTC 1 cut(s) 359
Eco130I CCWWGG 1 cut(s) 63
EcoRI GAATTC 1 cut(s) 74
EcoT14I CCWWGG 1 cut(s) 63
EcoT22I ATGCAT 1 cut(s) 233
ErhI CCWWGG 1 cut(s) 63
Esp3I CGTCTC 1 cut(s) 370
FaeI CATG 4 cut(s) 9, 67, 349, 427
FaiI YATR 6 cut(s) 7, 65, 347, 412, 425, 449
FalI AAGNNNNNCTT 2 cut(s) 243, 275
FatI CATG 4 cut(s) 5, 63, 345, 423
Fnu4HI GCNGC 1 cut(s) 97
FokI GGATG 1 cut(s) 20
Fsp4HI GCNGC 1 cut(s) 97
FspBI CTAG 1 cut(s) 164
GluI GCNGC 1 cut(s) 97
HaeIII GGCC 2 cut(s) 131, 428
Hin1II CATG 4 cut(s) 9, 67, 349, 427
HindIII AAGCTT 2 cut(s) 123, 417
HinfI GANTC 2 cut(s) 328, 374
HphI GGTGA 4 cut(s) 13, 22, 167, 217
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 3 cut(s) 54, 86, 370
Hpy188III TCNNGA 1 cut(s) 297
Hpy8I GTNNAC 1 cut(s) 208
Hpy99I CGWCG 2 cut(s) 83, 86
HpyCH4III ACNGT 1 cut(s) 364
HpyCH4V TGCA 1 cut(s) 231
HpyF10VI GCNNNNNNNGC 1 cut(s) 425
Hsp92II CATG 4 cut(s) 9, 67, 349, 427
LguI GCTCTTC 1 cut(s) 359
LmnI GCTCC 1 cut(s) 187
LpnPI CCDG 5 cut(s) 85, 201, 277, 282, 390
LweI GCATC 1 cut(s) 402
MaeI CTAG 1 cut(s) 164
MaeIII GTNAC 1 cut(s) 19
MboII GAAGA 3 cut(s) 38, 41, 346
MluCI AATT 6 cut(s) 14, 74, 109, 172, 462, 466
MlyI GAGTC 1 cut(s) 383
MmeI TCCRAC 2 cut(s) 64, 77
Mph1103I ATGCAT 1 cut(s) 233
MroXI GAANNNNTTC 2 cut(s) 74, 353
MseI TTAA 4 cut(s) 234, 324, 465, 469
MslI CAYNNNNRTG 1 cut(s) 38
MspA1I CMGCKG 2 cut(s) 96, 383
Mva1269I GAATGC 1 cut(s) 233
MwoI GCNNNNNNNGC 1 cut(s) 425
NcoI CCATGG 1 cut(s) 63
NlaIII CATG 4 cut(s) 9, 67, 349, 427
NlaIV GGNNCC 1 cut(s) 183
NmuCI GTSAC 1 cut(s) 19
NsiI ATGCAT 1 cut(s) 233
PacI TTAATTAA 1 cut(s) 469
PciSI GCTCTTC 1 cut(s) 359
PctI GAATGC 1 cut(s) 233
PdmI GAANNNNTTC 2 cut(s) 74, 353
PfeI GAWTC 1 cut(s) 328
PkrI GCNGC 1 cut(s) 98
PleI GAGTC 1 cut(s) 382
PpsI GAGTC 1 cut(s) 382
PshBI ATTAAT 1 cut(s) 465
PspN4I GGNNCC 1 cut(s) 183
PspPI GGNCC 1 cut(s) 129
PstNI CAGNNNCTG 1 cut(s) 99
RsaI GTAC 1 cut(s) 311
RsaNI GTAC 1 cut(s) 310
RseI CAYNNNNRTG 1 cut(s) 38
SapI GCTCTTC 1 cut(s) 359
SaqAI TTAA 4 cut(s) 234, 324, 465, 469
SatI GCNGC 1 cut(s) 97
Sau96I GGNCC 1 cut(s) 129
SchI GAGTC 1 cut(s) 383
SetI ASST 5 cut(s) 127, 207, 288, 354, 421
SfaNI GCATC 1 cut(s) 402
SmiMI CAYNNNNRTG 1 cut(s) 38
SpeI ACTAGT 1 cut(s) 163
Sse9I AATT 6 cut(s) 14, 74, 109, 172, 462, 466
SsiI CCGC 2 cut(s) 96, 381
SspMI CTAG 1 cut(s) 164
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 1 cut(s) 364
TasI AATT 6 cut(s) 14, 74, 109, 172, 462, 466
TauI GCSGC 1 cut(s) 99
TfiI GAWTC 1 cut(s) 328
Tru1I TTAA 4 cut(s) 234, 324, 465, 469
Tru9I TTAA 4 cut(s) 234, 324, 465, 469
TscAI CASTG 1 cut(s) 271
TseFI GTSAC 1 cut(s) 19
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 4 cut(s) 346, 362, 399, 412
TspGWI ACGGA 1 cut(s) 225
TspRI CASTG 1 cut(s) 271
VspI ATTAAT 1 cut(s) 465
XapI RAATTY 2 cut(s) 14, 74
XmnI GAANNNNTTC 2 cut(s) 74, 353
XspI CTAG 1 cut(s) 164
Zsp2I ATGCAT 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.