Blue copper
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 314 |
| AarI | CACCTGC | 1 cut(s) | 315 |
| Acc36I | ACCTGC | 1 cut(s) | 315 |
| AccI | GTMKAC | 1 cut(s) | 141 |
| AciI | CCGC | 2 cut(s) | 95, 180 |
| AcoI | YGGCCR | 2 cut(s) | 3, 11 |
| AfaI | GTAC | 1 cut(s) | 337 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 361, 362 |
| AgsI | TTSAA | 2 cut(s) | 202, 371 |
| AjnI | CCWGG | 1 cut(s) | 338 |
| AluBI | AGCT | 3 cut(s) | 172, 215, 387 |
| AluI | AGCT | 3 cut(s) | 172, 215, 387 |
| Alw26I | GTCTC | 2 cut(s) | 21, 30 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 387 |
| AoxI | GGCC | 4 cut(s) | 3, 11, 105, 329 |
| ApeKI | GCWGC | 2 cut(s) | 384, 387 |
| AsuHPI | GGTGA | 2 cut(s) | 384, 411 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 378 |
| BbvI | GCAGC | 2 cut(s) | 374, 396 |
| BciT130I | CCWGG | 1 cut(s) | 340 |
| BcoDI | GTCTC | 2 cut(s) | 21, 30 |
| BfmI | CTRYAG | 1 cut(s) | 405 |
| BfuAI | ACCTGC | 1 cut(s) | 315 |
| BisI | GCNGC | 2 cut(s) | 385, 388 |
| BlsI | GCNGC | 2 cut(s) | 386, 389 |
| Bme1390I | CCNGG | 1 cut(s) | 340 |
| BmrFI | CCNGG | 1 cut(s) | 340 |
| BmrI | ACTGGG | 1 cut(s) | 350 |
| BmsI | GCATC | 2 cut(s) | 167, 451 |
| BmuI | ACTGGG | 1 cut(s) | 350 |
| BpiI | GAAGAC | 1 cut(s) | 378 |
| BsaJI | CCNNGG | 1 cut(s) | 108 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 361, 362 |
| Bse1I | ACTGG | 3 cut(s) | 6, 356, 446 |
| BseBI | CCWGG | 1 cut(s) | 340 |
| BseDI | CCNNGG | 1 cut(s) | 108 |
| BseGI | GGATG | 3 cut(s) | 189, 310, 442 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 361, 362 |
| BseNI | ACTGG | 3 cut(s) | 6, 356, 446 |
| BseX3I | CGGCCG | 1 cut(s) | 11 |
| BseXI | GCAGC | 2 cut(s) | 374, 396 |
| BsgI | GTGCAG | 1 cut(s) | 380 |
| Bsh1285I | CGRYCG | 1 cut(s) | 14 |
| BshFI | GGCC | 4 cut(s) | 5, 13, 107, 331 |
| BsiEI | CGRYCG | 1 cut(s) | 14 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 361, 362 |
| BsmAI | GTCTC | 2 cut(s) | 21, 30 |
| BsmBI | CGTCTC | 2 cut(s) | 21, 30 |
| BsnI | GGCC | 4 cut(s) | 5, 13, 107, 331 |
| BspACI | CCGC | 2 cut(s) | 95, 180 |
| BspANI | GGCC | 4 cut(s) | 5, 13, 107, 331 |
| BspMI | ACCTGC | 1 cut(s) | 315 |
| BsrI | ACTGG | 3 cut(s) | 6, 356, 446 |
| BssECI | CCNNGG | 1 cut(s) | 108 |
| Bst2UI | CCWGG | 1 cut(s) | 340 |
| Bst4CI | ACNGT | 1 cut(s) | 33 |
| BstC8I | GCNNGC | 1 cut(s) | 156 |
| BstF5I | GGATG | 3 cut(s) | 189, 310, 442 |
| BstMAI | GTCTC | 2 cut(s) | 21, 30 |
| BstMCI | CGRYCG | 1 cut(s) | 14 |
| BstNI | CCWGG | 1 cut(s) | 340 |
| BstSCI | CCNGG | 1 cut(s) | 338 |
| BstSFI | CTRYAG | 1 cut(s) | 405 |
| BstV1I | GCAGC | 2 cut(s) | 374, 396 |
| BstV2I | GAAGAC | 1 cut(s) | 378 |
| BstZI | CGGCCG | 1 cut(s) | 11 |
| BsuRI | GGCC | 4 cut(s) | 5, 13, 107, 331 |
| BtsCI | GGATG | 3 cut(s) | 189, 310, 442 |
| BtsIMutI | CAGTG | 1 cut(s) | 363 |
| BveI | ACCTGC | 1 cut(s) | 315 |
| Cac8I | GCNNGC | 1 cut(s) | 156 |
| CaiI | CAGNNNCTG | 1 cut(s) | 387 |
| CsiI | ACCWGGT | 1 cut(s) | 338 |
| Csp6I | GTAC | 1 cut(s) | 336 |
| CviQI | GTAC | 1 cut(s) | 336 |
| EaeI | YGGCCR | 2 cut(s) | 3, 11 |
| EagI | CGGCCG | 1 cut(s) | 11 |
| EclXI | CGGCCG | 1 cut(s) | 11 |
| Eco52I | CGGCCG | 1 cut(s) | 11 |
| EcoRII | CCWGG | 1 cut(s) | 338 |
| Esp3I | CGTCTC | 2 cut(s) | 21, 30 |
| FaiI | YATR | 8 cut(s) | 177, 210, 267, 278, 293, 314, 346, 348 |
| FauNDI | CATATG | 1 cut(s) | 346 |
| FblI | GTMKAC | 1 cut(s) | 141 |
| Fnu4HI | GCNGC | 2 cut(s) | 385, 388 |
| FokI | GGATG | 3 cut(s) | 176, 317, 429 |
| Fsp4HI | GCNGC | 2 cut(s) | 385, 388 |
| GluI | GCNGC | 2 cut(s) | 385, 388 |
| HaeIII | GGCC | 4 cut(s) | 5, 13, 107, 331 |
| HincII | GTYRAC | 2 cut(s) | 142, 234 |
| HindII | GTYRAC | 2 cut(s) | 142, 234 |
| HinfI | GANTC | 1 cut(s) | 117 |
| HphI | GGTGA | 2 cut(s) | 384, 411 |
| Hpy166II | GTNNAC | 2 cut(s) | 142, 234 |
| Hpy188I | TCNGA | 1 cut(s) | 52 |
| Hpy188III | TCNNGA | 2 cut(s) | 193, 202 |
| Hpy8I | GTNNAC | 2 cut(s) | 142, 234 |
| Hpy99I | CGWCG | 3 cut(s) | 25, 37, 146 |
| HpyAV | CCTTC | 1 cut(s) | 405 |
| HpyCH4III | ACNGT | 1 cut(s) | 33 |
| HpyCH4V | TGCA | 4 cut(s) | 158, 239, 350, 361 |
| Lsp1109I | GCAGC | 2 cut(s) | 374, 396 |
| LweI | GCATC | 2 cut(s) | 167, 451 |
| MabI | ACCWGGT | 1 cut(s) | 338 |
| MboII | GAAGA | 1 cut(s) | 383 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MmeI | TCCRAC | 2 cut(s) | 69, 75 |
| MnlI | CCTC | 5 cut(s) | 85, 103, 263, 301, 427 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 387 |
| MspR9I | CCNGG | 1 cut(s) | 340 |
| MvaI | CCWGG | 1 cut(s) | 340 |
| NdeI | CATATG | 1 cut(s) | 346 |
| NmeAIII | GCCGAG | 1 cut(s) | 133 |
| PaqCI | CACCTGC | 1 cut(s) | 315 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 29 |
| PfeI | GAWTC | 1 cut(s) | 117 |
| PkrI | GCNGC | 2 cut(s) | 386, 389 |
| PsiI | TTATAA | 1 cut(s) | 314 |
| Psp6I | CCWGG | 1 cut(s) | 338 |
| PspGI | CCWGG | 1 cut(s) | 338 |
| PstNI | CAGNNNCTG | 1 cut(s) | 387 |
| PvuII | CAGCTG | 1 cut(s) | 387 |
| RsaI | GTAC | 1 cut(s) | 337 |
| RsaNI | GTAC | 1 cut(s) | 336 |
| SalI | GTCGAC | 1 cut(s) | 140 |
| SatI | GCNGC | 2 cut(s) | 385, 388 |
| ScrFI | CCNGG | 1 cut(s) | 340 |
| SetI | ASST | 9 cut(s) | 174, 217, 312, 329, 344, 389, 397, 419, 424 |
| SexAI | ACCWGGT | 1 cut(s) | 338 |
| SfaNI | GCATC | 2 cut(s) | 167, 451 |
| SfcI | CTRYAG | 1 cut(s) | 405 |
| SsiI | CCGC | 2 cut(s) | 95, 180 |
| StyD4I | CCNGG | 1 cut(s) | 338 |
| TaaI | ACNGT | 1 cut(s) | 33 |
| TaqI | TCGA | 1 cut(s) | 141 |
| TfiI | GAWTC | 1 cut(s) | 117 |
| TscAI | CASTG | 1 cut(s) | 363 |
| TseI | GCWGC | 2 cut(s) | 384, 387 |
| TspDTI | ATGAA | 3 cut(s) | 164, 225, 300 |
| TspGWI | ACGGA | 1 cut(s) | 9 |
| TspRI | CASTG | 1 cut(s) | 363 |
| XmiI | GTMKAC | 1 cut(s) | 141 |