Rorug07G0059300

Blue copper

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000318
Physical Location & Seq
Forward (+)
4264258 .. 4266135
1878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0059300.1

Sequence Viewer

Length: 1371 bp
ATGGCGGAAGTCACCTACCTTCAAATCCACGACCTTGAAGAAAACCCAGCCTTCGAATCCCTCCCCTACTGGTCCTCCAACGACTTCGACCTCTACATCTCCTCCGATCCCGATTTCCCGCCGGCCCAGTTCATCACCGTCCACGAAGAAGACGACGAAGACTTCGACGGCGAAGACGACATCTTTTCCCAGTACCATTCCACAATCCACGCCGAGCGGAACAACCGCGACGACGTCGTTTCGGAGCCCAATTCCATTTCCAACACCGACGACTTGTCGTCGGACCGCGAGAACCAGGTCAGTTTCGTCATGGATCTGTTCCAGCAGCGCGTCGAGCAGTCTCAGGTAACGGCCCGTTCCGTTGTGGTCTCCGGCGACTCCGATTTTGGGGTTGTGGAGGGGAACTGCGATATGGATGATGGGTTGGATCTGGATTTGAGTTTAGGGTTAGATTTTAGGAATTGTTTTGATGATCCTGATGAAGATGACTTCTTTGTGGGAAGGAGGGTTTCCGGGTCGGAATCCGGTGAGGCGACGTCTTCTGTAGGTAGGGTGGAGCCGTTTGAGAGCTGCGTGAGGCTCGTTGGGTTTGGATCCGAGTCTGATGAGGATGATAATGGGGTTATTGGGCTTGATTTGCATTCGGAGGAGGAGTATGGTGAGGACCATGTTCATGGTGATTTCGATGACGAAACGGGGGTTCCTCTGTGCTGGGATTCGCTTCGATTGGAGGAGCAGAGGGAGAGTAATGAGGAGTTTGAGTGGGAAGAAGTTGATGGTAGGGTGGAAGAGGTTTTCGGAATGTTGGTTGATCCTGATAATGAGGAGGAAGCGGGGTCTGTTTCGGTTTCTCTCTCGGCAATGGCTGCTCCTGAGGAGGAAGTGAGTGTGGAGAGAGTTGAAGCTCTGGGGAATTTGGAATGGGAAGTGTTGTTGAATTCCCGCAATTGGGAGCCGAATCAGGAGCTGGACCATGACGCTGAACATTTCCCTGGTGATCACGATGACTACATCTACACTGCCGAATATGATATGTTGTTTGGGCAGTTTTCCGAGAATGAGAATGTGGTGATGGGCAGGCCTCCGGCTGCTAATTCTTTTGTCGAGACTCTTCCTTCAGTGGTTGTGACTCAGGAGGATGTGGAGAAGGGCAATGCACTCTGTGCGGTATGCAAGGATGATATTACTGTCGGGGAACAAGGAAAGAAGCTGCCTTGTGCACATAGGTACCATGGCGATTGCATTGTGCCCTGGCTGCGCATTAGGAATACCTGTCCAGTTTGTCGATATGAGTTACCTACCGATGATGCTGCTTATGAGCGTGGGAGGAGCCAGAGGACAGCTCATGGACTGAACTTTGGGCAGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu_bind_like

Protein Analysis

456

Amino Acids

51.3

Weight (kDa)

4.05

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 387 - 429 8.6e-12 Ring finger domain
zf-RING_11 PF17123 388 - 415 9.7e-08 RING-like zinc finger
zf-C3HC4_2 PF13923 388 - 428 2.5e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 388 - 428 2.6e-06 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 405 - 429 6.2e-06 RING-H2 zinc finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000318)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17675
fragaria_vesca FvH4_4g34040 FvH4_5g01010 FvH4_5g01020 FvH4_5g01030 FvH4_5g01040 FvH4_6g39940
malus_domestica MD04G1075600.v1.1 MD04G1075800.v1.1 MD04G1075900.v1.1 MD06G1068300.v1.1 MD12G1007700.v1.1 MD12G1007800.v1.1 MD12G1007900.v1.1 MD14G1005400.v1.1
prunus_persica Prupe.5G084000_v2.0.a1 Prupe.5G084100_v2.0.a1 Prupe.5G084200_v2.0.a1 Prupe.5G084400_v2.0.a1 Prupe.7G008700_v2.0.a1 Prupe.7G009100_v2.0.a1
pyrus_communis pycom04g06640 pycom04g06650 pycom06g06620
rosa_chinensis RchiOBHm_Chr2g0154451 RchiOBHm_Chr2g0154471 RchiOBHm_Chr4g0443531 RchiOBHm_Chr7g0200311 RchiOBHm_Chr7g0200321 RchiOBHm_Chr7g0200341 RchiOBHm_Chr7g0200371
rosa_laevigata RLG00000003732 RLG00000003733 RLG00000003734 RLG00000003735 RLG00000003736 RLG00000003737 RLG00000005919 RLG00000020779
rosa_multiflora Rmu_co8434485.1_g000001 Rmu_sc0000648.1_g000005 Rmu_sc0001118.1_g000024 Rmu_sc0003808.1_g000012 Rmu_sc0005350.1_g000004 Rmu_sc0005350.1_g000005 Rmu_sc0005350.1_g000009 Rmu_sc0005350.1_g000010 Rmu_sc0005350.1_g000011 Rmu_sc0006475.1_g000003
rosa_roxburghii Rroxscaffold_2G00094310 Rroxscaffold_2G00094320 Rroxscaffold_3G00256060 Rroxscaffold_3G00256070 Rroxscaffold_3G00256090 Rroxscaffold_3G00256100 Rroxscaffold_3G00256110 Rroxscaffold_3G00256150 Rroxscaffold_3G00256160 Rroxscaffold_5G00384080
rosa_rugosa Rorug02G0444500 Rorug02G0444600 Rorug04G0347000 Rorug07G0059100 Rorug07G0059200 Rorug07G0059300 Rorug07G0059400 Rorug07G0059500 Rorug07G0059600 Rorug07G0059700 Rorug07G0059800
rosa_samantha Rh2AG509000 Rh2AG509100 Rh2BG520300 Rh2BG520400 Rh2CG494400 Rh2CG494500 Rh2DG530600 Rh2DG530700 Rh4AG402700 Rh4BG414400 Rh4CG430000 Rh4DG409900 Rh4DG411200 Rh7AG184500 Rh7AG184600 Rh7AG184700 Rh7AG184800 Rh7AG184900 Rh7AG185000 Rh7BG187200 Rh7BG187300 Rh7BG187400 Rh7BG187800 Rh7BG187900 Rh7BG188000 Rh7BG188100 Rh7CG194900 Rh7CG195000 Rh7CG195100 Rh7CG195200 Rh7CG195300 Rh7DG188500 Rh7DG188600 Rh7DG188700 Rh7DG188800 Rh7DG188900 Rh7DG189100
rosa_wichuraiana Rw2G041800 Rw2G041810 Rw4G034720 Rw7G016160 Rw7G016170 Rw7G016180 Rw7G016190 Rw7G016200 Rw7G016210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 237, 539
Acc16I TGCGCA 1 cut(s) 1259
Acc65I GGTACC 1 cut(s) 1227
AccB1I GGYRCC 1 cut(s) 1227
AccBSI CCGCTC 1 cut(s) 217
AccII CGCG 3 cut(s) 228, 288, 330
AciI CCGC 8 cut(s) 5, 119, 217, 226, 286, 833, 943, 1166
AclWI GGATC 7 cut(s) 101, 321, 435, 467, 588, 601, 806
AcsI RAATTY 2 cut(s) 913, 937
AcuI CTGAAG 1 cut(s) 1101
AcyI GRCGYC 2 cut(s) 234, 536
AdeI CACNNNGTG 1 cut(s) 1163
AfaI GTAC 2 cut(s) 194, 1229
AfiI CCNNNNNNNGG 3 cut(s) 387, 948, 949
AgsI TTSAA 4 cut(s) 23, 38, 902, 937
AhdI GACNNNNNGTC 2 cut(s) 274, 277
AjnI CCWGG 3 cut(s) 294, 991, 1250
AluBI AGCT 5 cut(s) 570, 905, 967, 1210, 1343
AluI AGCT 5 cut(s) 570, 905, 967, 1210, 1343
Alw21I GWGCWC 1 cut(s) 1222
Alw26I GTCTC 3 cut(s) 345, 373, 1100
Alw44I GTGCAC 1 cut(s) 1218
AlwI GGATC 7 cut(s) 101, 321, 435, 467, 588, 601, 806
AlwNI CAGNNNCTG 1 cut(s) 967
AoxI GGCC 3 cut(s) 123, 351, 1079
ApaLI GTGCAC 1 cut(s) 1218
ApeKI GCWGC 7 cut(s) 325, 570, 866, 1088, 1210, 1255, 1310
ApoI RAATTY 2 cut(s) 913, 937
ArsI GACNNNNNNTTYG 4 cut(s) 146, 178, 368, 400
Asp718I GGTACC 1 cut(s) 1227
AspLEI GCGC 2 cut(s) 330, 1260
AspS9I GGNCC 6 cut(s) 72, 124, 283, 352, 664, 970
AsuC2I CCSGG 1 cut(s) 514
AsuHPI GGTGA 7 cut(s) 4, 127, 539, 671, 689, 1007, 1081
AsuII TTCGAA 1 cut(s) 54
AvaII GGWCC 4 cut(s) 72, 283, 664, 970
AxyI CCTNAGG 1 cut(s) 873
BaeGI GKGCMC 2 cut(s) 1222, 1251
BaeI ACNNNNGTAYC 2 cut(s) 1211, 1244
BamHI GGATCC 1 cut(s) 593
BanI GGYRCC 1 cut(s) 1227
BanII GRGCYC 1 cut(s) 249
BbsI GAAGAC 4 cut(s) 156, 165, 180, 531
Bbv12I GWGCWC 1 cut(s) 1222
BbvI GCAGC 7 cut(s) 337, 557, 853, 1075, 1197, 1242, 1297
BccI CCATC 3 cut(s) 413, 770, 1066
BceAI ACGGC 3 cut(s) 184, 366, 544
BcgI CGANNNNNNTGC 2 cut(s) 1292, 1326
BciT130I CCWGG 3 cut(s) 296, 993, 1252
BclI TGATCA 1 cut(s) 997
BcnI CCSGG 1 cut(s) 514
BcoDI GTCTC 3 cut(s) 345, 373, 1100
BfmI CTRYAG 1 cut(s) 543
BisI GCNGC 7 cut(s) 326, 571, 867, 1089, 1211, 1256, 1311
BlsI GCNGC 7 cut(s) 327, 572, 868, 1090, 1212, 1257, 1312
Bme1390I CCNGG 4 cut(s) 296, 514, 993, 1252
Bme18I GGWCC 4 cut(s) 72, 283, 664, 970
BmeRI GACNNNNNGTC 2 cut(s) 274, 277
BmgT120I GGNCC 6 cut(s) 72, 124, 283, 352, 664, 970
BmiI GGNNCC 7 cut(s) 246, 558, 595, 702, 954, 1229, 1331
BmrFI CCNGG 4 cut(s) 296, 514, 993, 1252
BmrI ACTGGG 2 cut(s) 121, 184
BmsI GCATC 1 cut(s) 1297
BmuI ACTGGG 2 cut(s) 121, 184
BpiI GAAGAC 4 cut(s) 156, 165, 180, 531
BplI GAGNNNNNCTC 2 cut(s) 1327, 1359
Bpu14I TTCGAA 1 cut(s) 54
BpuMI CCSGG 1 cut(s) 514
BsaHI GRCGYC 2 cut(s) 234, 536
BsaI GGTCTC 1 cut(s) 373
BsaJI CCNNGG 3 cut(s) 991, 1231, 1250
BsaWI WCCGGW 1 cut(s) 524
BsaXI ACNNNNNCTCC 8 cut(s) 59, 86, 89, 116, 638, 668, 746, 776
Bsc4I CCNNNNNNNGG 3 cut(s) 387, 948, 949
Bse118I RCCGGY 1 cut(s) 121
Bse1I ACTGG 4 cut(s) 74, 127, 190, 1277
Bse21I CCTNAGG 1 cut(s) 873
Bse3DI GCAATG 2 cut(s) 867, 1159
BseBI CCWGG 3 cut(s) 296, 993, 1252
BseDI CCNNGG 3 cut(s) 991, 1231, 1250
BseGI GGATG 4 cut(s) 421, 616, 1144, 1183
BseLI CCNNNNNNNGG 3 cut(s) 387, 948, 949
BseMI GCAATG 2 cut(s) 867, 1159
BseMII CTCAG 3 cut(s) 356, 864, 1145
BseNI ACTGG 4 cut(s) 74, 127, 190, 1277
BseRI GAGGAG 8 cut(s) 91, 662, 665, 746, 767, 839, 890, 1342
BseSI GKGCMC 2 cut(s) 1222, 1251
BseXI GCAGC 7 cut(s) 337, 557, 853, 1075, 1197, 1242, 1297
BseYI CCCAGC 2 cut(s) 46, 711
Bsh1236I CGCG 3 cut(s) 228, 288, 330
BshFI GGCC 3 cut(s) 125, 353, 1081
BshNI GGYRCC 1 cut(s) 1227
BsiHKAI GWGCWC 1 cut(s) 1222
BsiSI CCGG 5 cut(s) 122, 372, 513, 525, 1085
BslI CCNNNNNNNGG 3 cut(s) 387, 948, 949
BsmAI GTCTC 3 cut(s) 345, 373, 1100
BsmI GAATGC 1 cut(s) 640
BsnI GGCC 3 cut(s) 125, 353, 1081
Bso31I GGTCTC 1 cut(s) 373
Bsp119I TTCGAA 1 cut(s) 54
Bsp1286I GDGCHC 3 cut(s) 249, 1222, 1251
Bsp143I GATC 7 cut(s) 106, 313, 427, 472, 593, 811, 997
Bsp19I CCATGG 1 cut(s) 1231
BspACI CCGC 8 cut(s) 5, 119, 217, 226, 286, 833, 943, 1166
BspANI GGCC 3 cut(s) 125, 353, 1081
BspCNI CTCAG 3 cut(s) 355, 865, 1144
BspFNI CGCG 3 cut(s) 228, 288, 330
BspLI GGNNCC 7 cut(s) 246, 558, 595, 702, 954, 1229, 1331
BspPI GGATC 7 cut(s) 101, 321, 435, 467, 588, 601, 806
BspT104I TTCGAA 1 cut(s) 54
BspT107I GGYRCC 1 cut(s) 1227
BspTNI GGTCTC 1 cut(s) 373
BsrBI CCGCTC 1 cut(s) 217
BsrDI GCAATG 2 cut(s) 867, 1159
BsrFI RCCGGY 1 cut(s) 121
BsrI ACTGG 4 cut(s) 74, 127, 190, 1277
BssAI RCCGGY 1 cut(s) 121
BssECI CCNNGG 3 cut(s) 991, 1231, 1250
BssMI GATC 7 cut(s) 106, 313, 427, 472, 593, 811, 997
BssNI GRCGYC 2 cut(s) 234, 536
BssT1I CCWWGG 1 cut(s) 1231
Bst2UI CCWGG 3 cut(s) 296, 993, 1252
Bst4CI ACNGT 2 cut(s) 139, 1189
Bst6I CTCTTC 2 cut(s) 783, 1116
BstACI GRCGYC 2 cut(s) 234, 536
BstAPI GCANNNNNTGC 2 cut(s) 866, 1163
BstBI TTCGAA 1 cut(s) 54
BstC8I GCNNGC 2 cut(s) 123, 1079
BstDEI CTNAG 3 cut(s) 342, 873, 1131
BstDSI CCRYGG 1 cut(s) 1231
BstF5I GGATG 4 cut(s) 421, 616, 1144, 1183
BstFNI CGCG 3 cut(s) 228, 288, 330
BstHHI GCGC 2 cut(s) 330, 1260
BstKTI GATC 7 cut(s) 109, 316, 430, 475, 596, 814, 1000
BstMAI GTCTC 3 cut(s) 345, 373, 1100
BstMBI GATC 7 cut(s) 106, 313, 427, 472, 593, 811, 997
BstMWI GCNNNNNNNGC 5 cut(s) 334, 637, 866, 1163, 1255
BstNI CCWGG 3 cut(s) 296, 993, 1252
BstSCI CCNGG 4 cut(s) 294, 512, 991, 1250
BstSFI CTRYAG 1 cut(s) 543
BstSLI GKGCMC 2 cut(s) 1222, 1251
BstUI CGCG 3 cut(s) 228, 288, 330
BstV1I GCAGC 7 cut(s) 337, 557, 853, 1075, 1197, 1242, 1297
BstV2I GAAGAC 4 cut(s) 156, 165, 180, 531
BstX2I RGATCY 3 cut(s) 313, 427, 593
BstXI CCANNNNNNTGG 1 cut(s) 674
BstYI RGATCY 3 cut(s) 313, 427, 593
Bsu36I CCTNAGG 1 cut(s) 873
BsuRI GGCC 3 cut(s) 125, 353, 1081
BtgI CCRYGG 1 cut(s) 1231
BtsCI GGATG 4 cut(s) 421, 616, 1144, 1183
BtsI GCAGTG 1 cut(s) 1017
BtsIMutI CAGTG 2 cut(s) 1017, 1125
Cac8I GCNNGC 2 cut(s) 123, 1079
CaiI CAGNNNCTG 1 cut(s) 967
CfoI GCGC 2 cut(s) 330, 1260
Cfr10I RCCGGY 1 cut(s) 121
Cfr13I GGNCC 6 cut(s) 72, 124, 283, 352, 664, 970
CpoI CGGWCCG 1 cut(s) 283
CseI GACGC 2 cut(s) 319, 986
CsiI ACCWGGT 1 cut(s) 294
Csp6I GTAC 2 cut(s) 193, 1228
CspI CGGWCCG 1 cut(s) 283
CviAII CATG 6 cut(s) 310, 668, 674, 974, 1232, 1346
CviQI GTAC 2 cut(s) 193, 1228
DdeI CTNAG 3 cut(s) 342, 873, 1131
DpnI GATC 7 cut(s) 108, 315, 429, 474, 595, 813, 999
DpnII GATC 7 cut(s) 106, 313, 427, 472, 593, 811, 997
DraIII CACNNNGTG 1 cut(s) 1163
DriI GACNNNNNGTC 2 cut(s) 274, 277
Eam1104I CTCTTC 2 cut(s) 783, 1116
Eam1105I GACNNNNNGTC 2 cut(s) 274, 277
EarI CTCTTC 2 cut(s) 783, 1116
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 1231
Eco147I AGGCCT 1 cut(s) 1081
Eco24I GRGCYC 1 cut(s) 249
Eco31I GGTCTC 1 cut(s) 373
Eco47I GGWCC 4 cut(s) 72, 283, 664, 970
Eco57I CTGAAG 1 cut(s) 1101
Eco81I CCTNAGG 1 cut(s) 873
EcoRI GAATTC 1 cut(s) 937
EcoRII CCWGG 3 cut(s) 294, 991, 1250
EcoT14I CCWWGG 1 cut(s) 1231
EcoT38I GRGCYC 1 cut(s) 249
ErhI CCWWGG 1 cut(s) 1231
FaeI CATG 6 cut(s) 313, 671, 677, 977, 1235, 1349
FatI CATG 6 cut(s) 309, 667, 673, 973, 1231, 1345
FauI CCCGC 3 cut(s) 126, 826, 950
FbaI TGATCA 1 cut(s) 997
Fnu4HI GCNGC 7 cut(s) 326, 571, 867, 1089, 1211, 1256, 1311
FokI GGATG 4 cut(s) 428, 623, 1151, 1190
FriOI GRGCYC 1 cut(s) 249
Fsp4HI GCNGC 7 cut(s) 326, 571, 867, 1089, 1211, 1256, 1311
FspI TGCGCA 1 cut(s) 1259
GlaI GCGC 2 cut(s) 329, 1259
GluI GCNGC 7 cut(s) 326, 571, 867, 1089, 1211, 1256, 1311
GsaI CCCAGC 2 cut(s) 50, 715
HaeIII GGCC 3 cut(s) 125, 353, 1081
HapII CCGG 5 cut(s) 122, 372, 513, 525, 1085
HgaI GACGC 2 cut(s) 319, 986
HhaI GCGC 2 cut(s) 330, 1260
Hin1I GRCGYC 2 cut(s) 234, 536
Hin1II CATG 6 cut(s) 313, 671, 677, 977, 1235, 1349
Hin6I GCGC 2 cut(s) 328, 1258
HinP1I GCGC 2 cut(s) 328, 1258
HinfI GANTC 8 cut(s) 56, 377, 521, 599, 716, 958, 1108, 1129
HpaII CCGG 5 cut(s) 122, 372, 513, 525, 1085
HphI GGTGA 7 cut(s) 4, 127, 539, 671, 689, 1007, 1081
Hpy166II GTNNAC 2 cut(s) 142, 1220
Hpy188III TCNNGA 9 cut(s) 110, 431, 476, 815, 872, 962, 1001, 1105, 1133
Hpy8I GTNNAC 2 cut(s) 142, 1220
Hpy99I CGWCG 9 cut(s) 158, 170, 233, 236, 239, 272, 283, 335, 538
HpyAV CCTTC 5 cut(s) 29, 61, 495, 1125, 1141
HpyCH4III ACNGT 2 cut(s) 139, 1189
HpyCH4IV ACGT 2 cut(s) 234, 536
HpyCH4V TGCA 5 cut(s) 640, 1157, 1173, 1220, 1242
HpyF10VI GCNNNNNNNGC 5 cut(s) 334, 637, 866, 1163, 1255
HpyF3I CTNAG 3 cut(s) 342, 873, 1131
HpySE526I ACGT 2 cut(s) 234, 536
Hsp92I GRCGYC 2 cut(s) 234, 536
Hsp92II CATG 6 cut(s) 313, 671, 677, 977, 1235, 1349
HspAI GCGC 2 cut(s) 328, 1258
KpnI GGTACC 1 cut(s) 1231
KroI GCCGGC 1 cut(s) 121
KroNI GCCGGC 1 cut(s) 123
Ksp22I TGATCA 1 cut(s) 997
Kzo9I GATC 7 cut(s) 106, 313, 427, 472, 593, 811, 997
LmnI GCTCC 7 cut(s) 244, 556, 733, 874, 952, 964, 1329
Lsp1109I GCAGC 7 cut(s) 337, 557, 853, 1075, 1197, 1242, 1297
LweI GCATC 1 cut(s) 1297
MabI ACCWGGT 1 cut(s) 294
MaeII ACGT 2 cut(s) 234, 536
MaeIII GTNAC 4 cut(s) 10, 346, 1126, 1293
MalI GATC 7 cut(s) 108, 315, 429, 474, 595, 813, 999
MbiI CCGCTC 1 cut(s) 217
MboI GATC 7 cut(s) 106, 313, 427, 472, 593, 811, 997
MfeI CAATTG 1 cut(s) 946
MflI RGATCY 3 cut(s) 313, 427, 593
MhlI GDGCHC 3 cut(s) 249, 1222, 1251
MluCI AATT 6 cut(s) 250, 460, 913, 937, 946, 1093
MlyI GAGTC 4 cut(s) 371, 608, 1102, 1123
MmeI TCCRAC 5 cut(s) 102, 261, 285, 405, 498
MroNI GCCGGC 1 cut(s) 121
MslI CAYNNNNRTG 1 cut(s) 672
MspI CCGG 5 cut(s) 122, 372, 513, 525, 1085
MspR9I CCNGG 4 cut(s) 296, 514, 993, 1252
MunI CAATTG 1 cut(s) 946
Mva1269I GAATGC 1 cut(s) 640
MvaI CCWGG 3 cut(s) 296, 993, 1252
MvnI CGCG 3 cut(s) 228, 288, 330
MwoI GCNNNNNNNGC 5 cut(s) 334, 637, 866, 1163, 1255
NaeI GCCGGC 1 cut(s) 123
NciI CCSGG 1 cut(s) 514
NcoI CCATGG 1 cut(s) 1231
NdeII GATC 7 cut(s) 106, 313, 427, 472, 593, 811, 997
NgoMIV GCCGGC 1 cut(s) 121
NlaIII CATG 6 cut(s) 313, 671, 677, 977, 1235, 1349
NlaIV GGNNCC 7 cut(s) 246, 558, 595, 702, 954, 1229, 1331
NmeAIII GCCGAG 2 cut(s) 238, 836
NmuCI GTSAC 2 cut(s) 10, 1126
NsbI TGCGCA 1 cut(s) 1259
NspV TTCGAA 1 cut(s) 54
PceI AGGCCT 1 cut(s) 1081
PcsI WCGNNNNNNNCGW 3 cut(s) 150, 162, 174
PctI GAATGC 1 cut(s) 640
PdiI GCCGGC 1 cut(s) 123
PfeI GAWTC 4 cut(s) 56, 521, 716, 958
PflFI GACNNNGTC 1 cut(s) 233
PkrI GCNGC 7 cut(s) 327, 572, 868, 1090, 1212, 1257, 1312
PleI GAGTC 4 cut(s) 371, 607, 1102, 1123
PpsI GAGTC 4 cut(s) 371, 607, 1102, 1123
Psp6I CCWGG 3 cut(s) 294, 991, 1250
PspFI CCCAGC 2 cut(s) 46, 711
PspGI CCWGG 3 cut(s) 294, 991, 1250
PspN4I GGNNCC 7 cut(s) 246, 558, 595, 702, 954, 1229, 1331
PspPI GGNCC 6 cut(s) 72, 124, 283, 352, 664, 970
PstNI CAGNNNCTG 1 cut(s) 967
PsuI RGATCY 3 cut(s) 313, 427, 593
PsyI GACNNNGTC 1 cut(s) 233
RsaI GTAC 2 cut(s) 194, 1229
RsaNI GTAC 2 cut(s) 193, 1228
RseI CAYNNNNRTG 1 cut(s) 672
Rsr2I CGGWCCG 1 cut(s) 283
RsrII CGGWCCG 1 cut(s) 283
SatI GCNGC 7 cut(s) 326, 571, 867, 1089, 1211, 1256, 1311
Sau3AI GATC 7 cut(s) 106, 313, 427, 472, 593, 811, 997
Sau96I GGNCC 6 cut(s) 72, 124, 283, 352, 664, 970
SchI GAGTC 4 cut(s) 371, 608, 1102, 1123
ScrFI CCNGG 4 cut(s) 296, 514, 993, 1252
SduI GDGCHC 3 cut(s) 249, 1222, 1251
SexAI ACCWGGT 1 cut(s) 294
SfaNI GCATC 1 cut(s) 1297
SfcI CTRYAG 1 cut(s) 543
SfuI TTCGAA 1 cut(s) 54
SinI GGWCC 4 cut(s) 72, 283, 664, 970
SmiMI CAYNNNNRTG 1 cut(s) 672
Sse9I AATT 6 cut(s) 250, 460, 913, 937, 946, 1093
SseBI AGGCCT 1 cut(s) 1081
SsiI CCGC 8 cut(s) 5, 119, 217, 226, 286, 833, 943, 1166
StuI AGGCCT 1 cut(s) 1081
StyD4I CCNGG 4 cut(s) 294, 512, 991, 1250
StyI CCWWGG 1 cut(s) 1231
TaaI ACNGT 2 cut(s) 139, 1189
TaiI ACGT 2 cut(s) 237, 539
TaqI TCGA 8 cut(s) 54, 87, 165, 333, 684, 724, 1104, 1285
TasI AATT 6 cut(s) 250, 460, 913, 937, 946, 1093
TfiI GAWTC 4 cut(s) 56, 521, 716, 958
TscAI CASTG 2 cut(s) 1024, 1125
TseFI GTSAC 2 cut(s) 10, 1126
TseI GCWGC 7 cut(s) 325, 570, 866, 1088, 1210, 1255, 1310
Tsp45I GTSAC 2 cut(s) 10, 1126
TspDTI ATGAA 3 cut(s) 121, 495, 662
TspGWI ACGGA 1 cut(s) 349
TspRI CASTG 2 cut(s) 1024, 1125
Tth111I GACNNNGTC 1 cut(s) 233
VneI GTGCAC 1 cut(s) 1218
VpaK11BI GGWCC 4 cut(s) 72, 283, 664, 970
XapI RAATTY 2 cut(s) 913, 937
ZraI GACGTC 2 cut(s) 235, 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.