pycom02g04540

Protein mrp homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
2968236 .. 2972005
3770 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g04540.8

Sequence Viewer

Length: 1167 bp
ATGATATTGCTTTCTATCTATTTTACGTTTTCCAATTCCTTTTGTTCAGATGCAGTTGGTGCTGATGAAATTTTGAAGGCGGAAGCTGAGAAAGATGTACTCAAAGCATTGTCTCAGATCATCGATCCAGACTTTGGGGTGGACATTGTCTCGTGTGGATTTGTGAAAGATCTGGACATCAATGATGTTTCATTTCGGTTAGAGCTCACTACACCAGCATGTCCAATAAAGGACATGGTAATTGACACAATCCTCATTGTTTTATCAGGACTCGCATATTTTGAACAACAGGCAAATGAGGTGTTGAACGCTCTTCCTTGGGTCAAAAATGTCAGTGTGACTATGTCAGCACAGCCAGCGAAACCAATTTATGCCGGGCAACTTCCGTCAGGGTTACAGACGATTTCAAATATTATAGCAGTTTCTAGTTGCAAGGGAGGTGTGGGAAGATCGACTGTAGCGGTAAACTTGGCATACACTTTGGCTGGCATGGGTGCTAGAGTTGGTATATTTGATGCTGACGTCCATGGTCCAAGTTTACCGACAATGGTCTCCCCTGAGAACCGAATACTAGTGATGAACCCAGAGAAGAAAACCATAATTCCTACCGAATACTTGGGAGTGAAATTGGTGTCATTTGGATTTTCCGGGCAAGGGCGTGCTATAATGCGAGGCCCTACGGTTTCTGGGGTCATCAACCAACTTCTAACTACAACTGAGGGAGAGCTGGATTACCTTGTTATTGACATGCCTCCAGGAACTGGTGATATTCAGCTTACTTTGTGCCAGGTTGTCCAGCAGGTCGGTATCCCGAATCTGTTTGATCTTCCCATTAGACCAACTCTATCTGCTTCCGGAGATAGTGGAACGCCCGAAGTGGTAGCTGATCCTCTAGGTGAAGTTTCGAAGACATTTCAGGGTCTCGGAATATGTGTTGTGCAACAGTATATTAACCGGCGCCATAGCAATAAACTAATACATGAAATTTTCTATGTTATGGCGCAGATTGCTCCTCACGATCAGTTGCAGACAATAGAGCGACTAGTTGATGTTCCTCGACTAGTTCCTTATCAGGCAAGTTACCATTCTTACCATAGTTTTTCACTGCATCGGCCTCAAATGGTAATAATAACAATGCTGTTTTTCCCTTCCCTTATACATGTTTGA

Protein Analysis

389

Amino Acids

42.15

Weight (kDa)

5.15

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 525
Acc36I ACCTGC 1 cut(s) 790
AccB1I GGYRCC 1 cut(s) 957
AccB7I CCANNNNNTGG 2 cut(s) 134, 761
AccIII TCCGGA 1 cut(s) 854
AciI CCGC 2 cut(s) 80, 461
AclWI GGATC 2 cut(s) 119, 881
AcsI RAATTY 2 cut(s) 69, 984
AcyI GRCGYC 2 cut(s) 522, 958
AfaI GTAC 1 cut(s) 99
AfiI CCNNNNNNNGG 3 cut(s) 134, 654, 761
AflIII ACRYGT 1 cut(s) 1159
AgsI TTSAA 4 cut(s) 76, 284, 307, 408
AhlI ACTAGT 3 cut(s) 571, 1042, 1060
AjnI CCWGG 2 cut(s) 754, 786
AluBI AGCT 5 cut(s) 86, 205, 727, 775, 884
AluI AGCT 5 cut(s) 86, 205, 727, 775, 884
Alw21I GWGCWC 1 cut(s) 207
Alw26I GTCTC 4 cut(s) 117, 154, 556, 926
AlwI GGATC 2 cut(s) 119, 881
AlwNI CAGNNNCTG 1 cut(s) 761
Aor13HI TCCGGA 1 cut(s) 854
AoxI GGCC 2 cut(s) 673, 1112
ApoI RAATTY 2 cut(s) 69, 984
AspLEI GCGC 2 cut(s) 960, 1003
AspS9I GGNCC 2 cut(s) 530, 674
AsuC2I CCSGG 2 cut(s) 376, 649
AsuHPI GGTGA 2 cut(s) 776, 908
AsuII TTCGAA 1 cut(s) 905
AvaII GGWCC 1 cut(s) 530
BanI GGYRCC 1 cut(s) 957
BanII GRGCYC 1 cut(s) 207
BauI CACGAG 1 cut(s) 151
BbsI GAAGAC 1 cut(s) 914
Bbv12I GWGCWC 1 cut(s) 207
BciT130I CCWGG 2 cut(s) 756, 788
BciVI GTATCC 1 cut(s) 818
BcnI CCSGG 2 cut(s) 376, 649
BcoDI GTCTC 4 cut(s) 117, 154, 556, 926
BcuI ACTAGT 3 cut(s) 571, 1042, 1060
BfaI CTAG 6 cut(s) 426, 498, 572, 893, 1043, 1061
BfmI CTRYAG 1 cut(s) 456
BfoI RGCGCY 1 cut(s) 961
BfuAI ACCTGC 1 cut(s) 790
BfuI GTATCC 1 cut(s) 818
BglII AGATCT 1 cut(s) 169
Bme1390I CCNGG 4 cut(s) 376, 649, 756, 788
Bme18I GGWCC 1 cut(s) 530
BmgT120I GGNCC 2 cut(s) 530, 674
BmiI GGNNCC 1 cut(s) 959
BmrFI CCNGG 4 cut(s) 376, 649, 756, 788
BmsI GCATC 3 cut(s) 40, 505, 1117
BoxI GACNNNNGTC 1 cut(s) 548
BpiI GAAGAC 1 cut(s) 914
BpmI CTGGAG 1 cut(s) 738
Bpu14I TTCGAA 1 cut(s) 905
BpuMI CCSGG 2 cut(s) 376, 649
Bsa29I ATCGAT 1 cut(s) 123
BsaHI GRCGYC 2 cut(s) 522, 958
BsaI GGTCTC 2 cut(s) 556, 926
BsaJI CCNNGG 2 cut(s) 317, 526
BsaWI WCCGGW 1 cut(s) 854
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 654, 761
Bse118I RCCGGY 1 cut(s) 954
Bse1I ACTGG 1 cut(s) 766
BseAI TCCGGA 1 cut(s) 854
BseBI CCWGG 2 cut(s) 756, 788
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 2 cut(s) 317, 526
BseLI CCNNNNNNNGG 3 cut(s) 134, 654, 761
BseMII CTCAG 4 cut(s) 78, 128, 549, 708
BseNI ACTGG 1 cut(s) 766
BseRI GAGGAG 1 cut(s) 1002
BshFI GGCC 2 cut(s) 675, 1114
BshNI GGYRCC 1 cut(s) 957
BshVI ATCGAT 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 207
BsiSI CCGG 4 cut(s) 375, 648, 855, 955
BslI CCNNNNNNNGG 3 cut(s) 134, 654, 761
BsmAI GTCTC 4 cut(s) 117, 154, 556, 926
BsnI GGCC 2 cut(s) 675, 1114
Bso31I GGTCTC 2 cut(s) 556, 926
Bsp119I TTCGAA 1 cut(s) 905
Bsp1286I GDGCHC 1 cut(s) 207
Bsp13I TCCGGA 1 cut(s) 854
Bsp143I GATC 7 cut(s) 117, 124, 169, 449, 823, 886, 1018
Bsp19I CCATGG 1 cut(s) 526
BspACI CCGC 2 cut(s) 80, 461
BspANI GGCC 2 cut(s) 675, 1114
BspCNI CTCAG 4 cut(s) 79, 127, 550, 709
BspDI ATCGAT 1 cut(s) 123
BspEI TCCGGA 1 cut(s) 854
BspLI GGNNCC 1 cut(s) 959
BspMI ACCTGC 1 cut(s) 790
BspPI GGATC 2 cut(s) 119, 881
BspQI GCTCTTC 1 cut(s) 318
BspT104I TTCGAA 1 cut(s) 905
BspT107I GGYRCC 1 cut(s) 957
BspTNI GGTCTC 2 cut(s) 556, 926
BsrFI RCCGGY 1 cut(s) 954
BsrI ACTGG 1 cut(s) 766
BssAI RCCGGY 1 cut(s) 954
BssECI CCNNGG 2 cut(s) 317, 526
BssMI GATC 7 cut(s) 117, 124, 169, 449, 823, 886, 1018
BssNI GRCGYC 2 cut(s) 522, 958
BssSI CACGAG 1 cut(s) 151
BssT1I CCWWGG 2 cut(s) 317, 526
Bst2BI CACGAG 1 cut(s) 151
Bst2UI CCWGG 2 cut(s) 756, 788
Bst4CI ACNGT 3 cut(s) 457, 682, 945
Bst6I CTCTTC 1 cut(s) 318
BstACI GRCGYC 2 cut(s) 522, 958
BstAPI GCANNNNNTGC 1 cut(s) 59
BstBI TTCGAA 1 cut(s) 905
BstC8I GCNNGC 3 cut(s) 357, 487, 660
BstDEI CTNAG 4 cut(s) 87, 114, 558, 717
BstDSI CCRYGG 1 cut(s) 526
BstH2I RGCGCY 1 cut(s) 961
BstHHI GCGC 2 cut(s) 960, 1003
BstKTI GATC 7 cut(s) 120, 127, 172, 452, 826, 889, 1021
BstMAI GTCTC 4 cut(s) 117, 154, 556, 926
BstMBI GATC 7 cut(s) 117, 124, 169, 449, 823, 886, 1018
BstMWI GCNNNNNNNGC 3 cut(s) 59, 356, 1007
BstNI CCWGG 2 cut(s) 756, 788
BstNSI RCATGY 3 cut(s) 222, 751, 1163
BstPAI GACNNNNGTC 1 cut(s) 548
BstSCI CCNGG 4 cut(s) 374, 647, 754, 786
BstSFI CTRYAG 1 cut(s) 456
BstV2I GAAGAC 1 cut(s) 914
BstX2I RGATCY 1 cut(s) 169
BstYI RGATCY 1 cut(s) 169
Bsu15I ATCGAT 1 cut(s) 123
BsuI GTATCC 1 cut(s) 818
BsuRI GGCC 2 cut(s) 675, 1114
BsuTUI ATCGAT 1 cut(s) 123
BtgI CCRYGG 1 cut(s) 526
BtsI GCAGTG 1 cut(s) 1103
BtsIMutI CAGTG 2 cut(s) 340, 1103
BveI ACCTGC 1 cut(s) 790
Cac8I GCNNGC 3 cut(s) 357, 487, 660
CaiI CAGNNNCTG 1 cut(s) 761
CfoI GCGC 2 cut(s) 960, 1003
Cfr10I RCCGGY 1 cut(s) 954
Cfr13I GGNCC 2 cut(s) 530, 674
ClaI ATCGAT 1 cut(s) 123
Csp6I GTAC 1 cut(s) 98
CviAII CATG 7 cut(s) 219, 235, 490, 527, 748, 980, 1160
CviJI RGCY 9 cut(s) 86, 205, 355, 485, 675, 727, 775, 884, 1114
CviKI_1 RGCY 9 cut(s) 86, 205, 355, 485, 675, 727, 775, 884, 1114
CviQI GTAC 1 cut(s) 98
DdeI CTNAG 4 cut(s) 87, 114, 558, 717
DinI GGCGCC 1 cut(s) 959
DpnI GATC 7 cut(s) 119, 126, 171, 451, 825, 888, 1020
DpnII GATC 7 cut(s) 117, 124, 169, 449, 823, 886, 1018
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
EciI GGCGGA 1 cut(s) 95
Ecl136II GAGCTC 1 cut(s) 205
Eco130I CCWWGG 2 cut(s) 317, 526
Eco24I GRGCYC 1 cut(s) 207
Eco31I GGTCTC 2 cut(s) 556, 926
Eco47I GGWCC 1 cut(s) 530
Eco53kI GAGCTC 1 cut(s) 205
EcoICRI GAGCTC 1 cut(s) 205
EcoO109I RGGNCCY 1 cut(s) 674
EcoRII CCWGG 2 cut(s) 754, 786
EcoT14I CCWWGG 2 cut(s) 317, 526
EcoT38I GRGCYC 1 cut(s) 207
EgeI GGCGCC 1 cut(s) 959
EheI GGCGCC 1 cut(s) 959
ErhI CCWWGG 2 cut(s) 317, 526
FaeI CATG 7 cut(s) 222, 238, 493, 530, 751, 983, 1163
FatI CATG 7 cut(s) 218, 234, 489, 526, 747, 979, 1159
FriOI GRGCYC 1 cut(s) 207
FspBI CTAG 6 cut(s) 426, 498, 572, 893, 1043, 1061
GlaI GCGC 2 cut(s) 959, 1002
GsuI CTGGAG 1 cut(s) 738
HaeII RGCGCY 1 cut(s) 961
HaeIII GGCC 2 cut(s) 675, 1114
HapII CCGG 4 cut(s) 375, 648, 855, 955
HhaI GCGC 2 cut(s) 960, 1003
Hin1I GRCGYC 2 cut(s) 522, 958
Hin1II CATG 7 cut(s) 222, 238, 493, 530, 751, 983, 1163
Hin6I GCGC 2 cut(s) 958, 1001
HinP1I GCGC 2 cut(s) 958, 1001
HinfI GANTC 2 cut(s) 270, 814
HpaII CCGG 4 cut(s) 375, 648, 855, 955
HphI GGTGA 2 cut(s) 776, 908
Hpy166II GTNNAC 3 cut(s) 142, 466, 539
Hpy188I TCNGA 3 cut(s) 49, 117, 926
Hpy188III TCNNGA 6 cut(s) 128, 173, 267, 811, 855, 1016
Hpy8I GTNNAC 3 cut(s) 142, 466, 539
HpyAV CCTTC 2 cut(s) 70, 1158
HpyCH4III ACNGT 3 cut(s) 457, 682, 945
HpyCH4IV ACGT 2 cut(s) 26, 522
HpyCH4V TGCA 5 cut(s) 53, 432, 940, 1027, 1108
HpyF10VI GCNNNNNNNGC 3 cut(s) 59, 356, 1007
HpyF3I CTNAG 4 cut(s) 87, 114, 558, 717
HpySE526I ACGT 2 cut(s) 26, 522
Hsp92I GRCGYC 2 cut(s) 522, 958
Hsp92II CATG 7 cut(s) 222, 238, 493, 530, 751, 983, 1163
HspAI GCGC 2 cut(s) 958, 1001
KasI GGCGCC 1 cut(s) 957
Kpn2I TCCGGA 1 cut(s) 854
Kzo9I GATC 7 cut(s) 117, 124, 169, 449, 823, 886, 1018
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 1 cut(s) 1015
LweI GCATC 3 cut(s) 40, 505, 1117
MaeI CTAG 6 cut(s) 426, 498, 572, 893, 1043, 1061
MaeII ACGT 2 cut(s) 26, 522
MaeIII GTNAC 3 cut(s) 337, 393, 1079
MalI GATC 7 cut(s) 119, 126, 171, 451, 825, 888, 1020
MboI GATC 7 cut(s) 117, 124, 169, 449, 823, 886, 1018
MboII GAAGA 5 cut(s) 305, 459, 601, 818, 919
MflI RGATCY 1 cut(s) 169
MhlI GDGCHC 1 cut(s) 207
MluCI AATT 7 cut(s) 34, 69, 240, 366, 600, 626, 984
Mly113I GGCGCC 1 cut(s) 958
MlyI GAGTC 1 cut(s) 264
MroI TCCGGA 1 cut(s) 854
MseI TTAA 1 cut(s) 951
MslI CAYNNNNRTG 1 cut(s) 217
MspI CCGG 4 cut(s) 375, 648, 855, 955
MspR9I CCNGG 4 cut(s) 376, 649, 756, 788
MvaI CCWGG 2 cut(s) 756, 788
MwoI GCNNNNNNNGC 3 cut(s) 59, 356, 1007
NarI GGCGCC 1 cut(s) 958
NciI CCSGG 2 cut(s) 376, 649
NcoI CCATGG 1 cut(s) 526
NdeII GATC 7 cut(s) 117, 124, 169, 449, 823, 886, 1018
NlaIII CATG 7 cut(s) 222, 238, 493, 530, 751, 983, 1163
NlaIV GGNNCC 1 cut(s) 959
NmuCI GTSAC 1 cut(s) 337
NspI RCATGY 3 cut(s) 222, 751, 1163
NspV TTCGAA 1 cut(s) 905
PciI ACATGT 1 cut(s) 1159
PciSI GCTCTTC 1 cut(s) 318
PfeI GAWTC 1 cut(s) 814
PflFI GACNNNGTC 2 cut(s) 146, 343
PflMI CCANNNNNTGG 2 cut(s) 134, 761
PfoI TCCNGGA 1 cut(s) 754
PleI GAGTC 1 cut(s) 264
PluTI GGCGCC 1 cut(s) 961
PpsI GAGTC 1 cut(s) 264
PscI ACATGT 1 cut(s) 1159
PshAI GACNNNNGTC 1 cut(s) 548
Psp124BI GAGCTC 1 cut(s) 207
Psp6I CCWGG 2 cut(s) 754, 786
PspGI CCWGG 2 cut(s) 754, 786
PspN4I GGNNCC 1 cut(s) 959
PspPI GGNCC 2 cut(s) 530, 674
PstNI CAGNNNCTG 1 cut(s) 761
PsuI RGATCY 1 cut(s) 169
PsyI GACNNNGTC 2 cut(s) 146, 343
RsaI GTAC 1 cut(s) 99
RsaNI GTAC 1 cut(s) 98
RseI CAYNNNNRTG 1 cut(s) 217
SacI GAGCTC 1 cut(s) 207
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 1 cut(s) 951
Sau3AI GATC 7 cut(s) 117, 124, 169, 449, 823, 886, 1018
Sau96I GGNCC 2 cut(s) 530, 674
SchI GAGTC 1 cut(s) 264
ScrFI CCNGG 4 cut(s) 376, 649, 756, 788
SduI GDGCHC 1 cut(s) 207
SfaNI GCATC 3 cut(s) 40, 505, 1117
SfcI CTRYAG 1 cut(s) 456
SfoI GGCGCC 1 cut(s) 959
SfuI TTCGAA 1 cut(s) 905
SinI GGWCC 1 cut(s) 530
SmiMI CAYNNNNRTG 1 cut(s) 217
SpeI ACTAGT 3 cut(s) 571, 1042, 1060
Sse9I AATT 7 cut(s) 34, 69, 240, 366, 600, 626, 984
SsiI CCGC 2 cut(s) 80, 461
SspDI GGCGCC 1 cut(s) 957
SspI AATATT 1 cut(s) 412
SspMI CTAG 6 cut(s) 426, 498, 572, 893, 1043, 1061
SstI GAGCTC 1 cut(s) 207
StyD4I CCNGG 4 cut(s) 374, 647, 754, 786
StyI CCWWGG 2 cut(s) 317, 526
TaaI ACNGT 3 cut(s) 457, 682, 945
TaiI ACGT 2 cut(s) 29, 525
TaqI TCGA 4 cut(s) 123, 452, 905, 1057
TasI AATT 7 cut(s) 34, 69, 240, 366, 600, 626, 984
TatI WGTACW 1 cut(s) 97
TfiI GAWTC 1 cut(s) 814
Tru1I TTAA 1 cut(s) 951
Tru9I TTAA 1 cut(s) 951
TscAI CASTG 2 cut(s) 340, 1110
TseFI GTSAC 1 cut(s) 337
Tsp45I GTSAC 1 cut(s) 337
TspDTI ATGAA 4 cut(s) 81, 180, 593, 996
TspGWI ACGGA 1 cut(s) 375
TspRI CASTG 2 cut(s) 340, 1110
Tth111I GACNNNGTC 2 cut(s) 146, 343
Van91I CCANNNNNTGG 2 cut(s) 134, 761
VpaK11BI GGWCC 1 cut(s) 530
XapI RAATTY 2 cut(s) 69, 984
XceI RCATGY 3 cut(s) 222, 751, 1163
XspI CTAG 6 cut(s) 426, 498, 572, 893, 1043, 1061
ZraI GACGTC 1 cut(s) 523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.