DEAD-box ATP-dependent RNA helicase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 247 |
| AccB1I | GGYRCC | 1 cut(s) | 515 |
| AciI | CCGC | 3 cut(s) | 392, 580, 584 |
| AcoI | YGGCCR | 2 cut(s) | 46, 581 |
| AcsI | RAATTY | 4 cut(s) | 134, 726, 1042, 1135 |
| AcuI | CTGAAG | 3 cut(s) | 98, 458, 752 |
| AcyI | GRCGYC | 1 cut(s) | 516 |
| AfaI | GTAC | 2 cut(s) | 895, 908 |
| AfeI | AGCGCT | 1 cut(s) | 531 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 512, 749 |
| AgsI | TTSAA | 7 cut(s) | 291, 842, 869, 950, 1049, 1184, 1234 |
| AjnI | CCWGG | 3 cut(s) | 505, 604, 1032 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 971, 1003 |
| AluBI | AGCT | 7 cut(s) | 61, 92, 196, 326, 456, 466, 497 |
| AluI | AGCT | 7 cut(s) | 61, 92, 196, 326, 456, 466, 497 |
| Alw26I | GTCTC | 1 cut(s) | 313 |
| Ama87I | CYCGRG | 1 cut(s) | 451 |
| Aor51HI | AGCGCT | 1 cut(s) | 531 |
| AoxI | GGCC | 4 cut(s) | 46, 503, 581, 1227 |
| ApeKI | GCWGC | 3 cut(s) | 456, 880, 1097 |
| ApoI | RAATTY | 4 cut(s) | 134, 726, 1042, 1135 |
| AspLEI | GCGC | 2 cut(s) | 518, 532 |
| AspS9I | GGNCC | 1 cut(s) | 503 |
| AsuC2I | CCSGG | 1 cut(s) | 259 |
| AsuHPI | GGTGA | 4 cut(s) | 199, 710, 764, 925 |
| AvaI | CYCGRG | 1 cut(s) | 451 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 60, 93 |
| BalI | TGGCCA | 1 cut(s) | 48 |
| BanI | GGYRCC | 1 cut(s) | 515 |
| BauI | CACGAG | 1 cut(s) | 936 |
| BbvI | GCAGC | 3 cut(s) | 443, 892, 1084 |
| BciT130I | CCWGG | 3 cut(s) | 507, 606, 1034 |
| BclI | TGATCA | 1 cut(s) | 481 |
| BcnI | CCSGG | 1 cut(s) | 259 |
| BcoDI | GTCTC | 1 cut(s) | 313 |
| BfaI | CTAG | 4 cut(s) | 89, 140, 309, 650 |
| BfmI | CTRYAG | 7 cut(s) | 357, 425, 457, 525, 861, 875, 1098 |
| BfoI | RGCGCY | 2 cut(s) | 519, 533 |
| BfuAI | ACCTGC | 1 cut(s) | 247 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1235 |
| BisI | GCNGC | 5 cut(s) | 457, 581, 584, 881, 1098 |
| BlsI | GCNGC | 5 cut(s) | 458, 582, 585, 882, 1099 |
| Bme1390I | CCNGG | 4 cut(s) | 259, 507, 606, 1034 |
| BmeT110I | CYCGRG | 1 cut(s) | 451 |
| BmgT120I | GGNCC | 1 cut(s) | 503 |
| BmiI | GGNNCC | 3 cut(s) | 517, 827, 1086 |
| BmrFI | CCNGG | 4 cut(s) | 259, 507, 606, 1034 |
| BmsI | GCATC | 3 cut(s) | 385, 857, 951 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1110 |
| BpuMI | CCSGG | 1 cut(s) | 259 |
| BsaHI | GRCGYC | 1 cut(s) | 516 |
| BsaI | GGTCTC | 1 cut(s) | 313 |
| BsaJI | CCNNGG | 2 cut(s) | 200, 408 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 512, 749 |
| Bse1I | ACTGG | 1 cut(s) | 899 |
| BseBI | CCWGG | 3 cut(s) | 507, 606, 1034 |
| BseDI | CCNNGG | 2 cut(s) | 200, 408 |
| BseGI | GGATG | 1 cut(s) | 400 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 512, 749 |
| BseMII | CTCAG | 1 cut(s) | 76 |
| BseNI | ACTGG | 1 cut(s) | 899 |
| BseRI | GAGGAG | 3 cut(s) | 555, 716, 1094 |
| BseX3I | CGGCCG | 1 cut(s) | 581 |
| BseXI | GCAGC | 3 cut(s) | 443, 892, 1084 |
| BsgI | GTGCAG | 2 cut(s) | 225, 923 |
| Bsh1285I | CGRYCG | 1 cut(s) | 584 |
| BshFI | GGCC | 4 cut(s) | 48, 505, 583, 1229 |
| BshNI | GGYRCC | 1 cut(s) | 515 |
| BsiEI | CGRYCG | 1 cut(s) | 584 |
| BsiHKCI | CYCGRG | 1 cut(s) | 451 |
| BsiSI | CCGG | 1 cut(s) | 258 |
| BslFI | GGGAC | 1 cut(s) | 433 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 512, 749 |
| BsmAI | GTCTC | 1 cut(s) | 313 |
| BsmFI | GGGAC | 1 cut(s) | 433 |
| BsnI | GGCC | 4 cut(s) | 48, 505, 583, 1229 |
| Bso31I | GGTCTC | 1 cut(s) | 313 |
| BsoBI | CYCGRG | 1 cut(s) | 451 |
| Bsp143I | GATC | 3 cut(s) | 109, 189, 481 |
| BspACI | CCGC | 3 cut(s) | 392, 580, 584 |
| BspANI | GGCC | 4 cut(s) | 48, 505, 583, 1229 |
| BspCNI | CTCAG | 1 cut(s) | 75 |
| BspLI | GGNNCC | 3 cut(s) | 517, 827, 1086 |
| BspMAI | CTGCAG | 3 cut(s) | 429, 461, 1102 |
| BspMI | ACCTGC | 1 cut(s) | 247 |
| BspT107I | GGYRCC | 1 cut(s) | 515 |
| BspTNI | GGTCTC | 1 cut(s) | 313 |
| BsrI | ACTGG | 1 cut(s) | 899 |
| BssECI | CCNNGG | 2 cut(s) | 200, 408 |
| BssMI | GATC | 3 cut(s) | 109, 189, 481 |
| BssNI | GRCGYC | 1 cut(s) | 516 |
| BssSI | CACGAG | 1 cut(s) | 936 |
| BssT1I | CCWWGG | 2 cut(s) | 200, 408 |
| Bst2BI | CACGAG | 1 cut(s) | 936 |
| Bst2UI | CCWGG | 3 cut(s) | 507, 606, 1034 |
| Bst4CI | ACNGT | 4 cut(s) | 361, 402, 865, 1109 |
| Bst6I | CTCTTC | 2 cut(s) | 1071, 1205 |
| BstACI | GRCGYC | 1 cut(s) | 516 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 239 |
| BstC8I | GCNNGC | 2 cut(s) | 468, 1227 |
| BstDEI | CTNAG | 3 cut(s) | 62, 821, 972 |
| BstF5I | GGATG | 1 cut(s) | 400 |
| BstH2I | RGCGCY | 2 cut(s) | 519, 533 |
| BstHHI | GCGC | 2 cut(s) | 518, 532 |
| BstKTI | GATC | 3 cut(s) | 112, 192, 484 |
| BstMAI | GTCTC | 1 cut(s) | 313 |
| BstMBI | GATC | 3 cut(s) | 109, 189, 481 |
| BstMCI | CGRYCG | 1 cut(s) | 584 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 166, 239, 456, 1235 |
| BstNI | CCWGG | 3 cut(s) | 507, 606, 1034 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1110 |
| BstSCI | CCNGG | 4 cut(s) | 257, 505, 604, 1032 |
| BstSFI | CTRYAG | 7 cut(s) | 357, 425, 457, 525, 861, 875, 1098 |
| BstV1I | GCAGC | 3 cut(s) | 443, 892, 1084 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 500 |
| BstZI | CGGCCG | 1 cut(s) | 581 |
| BsuRI | GGCC | 4 cut(s) | 48, 505, 583, 1229 |
| BtsCI | GGATG | 1 cut(s) | 400 |
| BtsI | GCAGTG | 1 cut(s) | 422 |
| BtsIMutI | CAGTG | 5 cut(s) | 70, 366, 382, 422, 906 |
| BveI | ACCTGC | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 2 cut(s) | 468, 1227 |
| CciNI | GCGGCCGC | 1 cut(s) | 581 |
| CfoI | GCGC | 2 cut(s) | 518, 532 |
| Cfr13I | GGNCC | 1 cut(s) | 503 |
| CseI | GACGC | 1 cut(s) | 618 |
| CsiI | ACCWGGT | 1 cut(s) | 1032 |
| Csp6I | GTAC | 2 cut(s) | 894, 907 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 165, 200, 279, 314 |
| CviAII | CATG | 2 cut(s) | 130, 746 |
| CviQI | GTAC | 2 cut(s) | 894, 907 |
| DdeI | CTNAG | 3 cut(s) | 62, 821, 972 |
| DinI | GGCGCC | 1 cut(s) | 517 |
| DpnI | GATC | 3 cut(s) | 111, 191, 483 |
| DpnII | GATC | 3 cut(s) | 109, 189, 481 |
| EaeI | YGGCCR | 2 cut(s) | 46, 581 |
| EagI | CGGCCG | 1 cut(s) | 581 |
| Eam1104I | CTCTTC | 2 cut(s) | 1071, 1205 |
| EarI | CTCTTC | 2 cut(s) | 1071, 1205 |
| EciI | GGCGGA | 1 cut(s) | 407 |
| EclXI | CGGCCG | 1 cut(s) | 581 |
| Eco130I | CCWWGG | 2 cut(s) | 200, 408 |
| Eco147I | AGGCCT | 1 cut(s) | 1229 |
| Eco31I | GGTCTC | 1 cut(s) | 313 |
| Eco47III | AGCGCT | 1 cut(s) | 531 |
| Eco52I | CGGCCG | 1 cut(s) | 581 |
| Eco57I | CTGAAG | 3 cut(s) | 98, 458, 752 |
| Eco88I | CYCGRG | 1 cut(s) | 451 |
| EcoRII | CCWGG | 3 cut(s) | 505, 604, 1032 |
| EcoT14I | CCWWGG | 2 cut(s) | 200, 408 |
| EgeI | GGCGCC | 1 cut(s) | 517 |
| EheI | GGCGCC | 1 cut(s) | 517 |
| ErhI | CCWWGG | 2 cut(s) | 200, 408 |
| FaeI | CATG | 2 cut(s) | 133, 749 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1214 |
| FaqI | GGGAC | 1 cut(s) | 433 |
| FatI | CATG | 2 cut(s) | 129, 745 |
| FbaI | TGATCA | 1 cut(s) | 481 |
| Fnu4HI | GCNGC | 5 cut(s) | 457, 581, 584, 881, 1098 |
| FokI | GGATG | 1 cut(s) | 407 |
| Fsp4HI | GCNGC | 5 cut(s) | 457, 581, 584, 881, 1098 |
| FspBI | CTAG | 4 cut(s) | 89, 140, 309, 650 |
| GlaI | GCGC | 2 cut(s) | 517, 531 |
| GluI | GCNGC | 5 cut(s) | 457, 581, 584, 881, 1098 |
| HaeII | RGCGCY | 2 cut(s) | 519, 533 |
| HaeIII | GGCC | 4 cut(s) | 48, 505, 583, 1229 |
| HapII | CCGG | 1 cut(s) | 258 |
| HgaI | GACGC | 1 cut(s) | 618 |
| HhaI | GCGC | 2 cut(s) | 518, 532 |
| Hin1I | GRCGYC | 1 cut(s) | 516 |
| Hin1II | CATG | 2 cut(s) | 133, 749 |
| Hin6I | GCGC | 2 cut(s) | 516, 530 |
| HinP1I | GCGC | 2 cut(s) | 516, 530 |
| HincII | GTYRAC | 2 cut(s) | 405, 1105 |
| HindII | GTYRAC | 2 cut(s) | 405, 1105 |
| HinfI | GANTC | 1 cut(s) | 642 |
| HpaI | GTTAAC | 1 cut(s) | 405 |
| HpaII | CCGG | 1 cut(s) | 258 |
| HphI | GGTGA | 4 cut(s) | 199, 710, 764, 925 |
| Hpy166II | GTNNAC | 4 cut(s) | 405, 755, 896, 1105 |
| Hpy188I | TCNGA | 3 cut(s) | 477, 711, 732 |
| Hpy188III | TCNNGA | 3 cut(s) | 107, 208, 799 |
| Hpy8I | GTNNAC | 4 cut(s) | 405, 755, 896, 1105 |
| HpyAV | CCTTC | 5 cut(s) | 626, 727, 796, 1002, 1228 |
| HpyCH4III | ACNGT | 4 cut(s) | 361, 402, 865, 1109 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 166, 239, 456, 1235 |
| HpyF3I | CTNAG | 3 cut(s) | 62, 821, 972 |
| Hsp92I | GRCGYC | 1 cut(s) | 516 |
| Hsp92II | CATG | 2 cut(s) | 133, 749 |
| HspAI | GCGC | 2 cut(s) | 516, 530 |
| KasI | GGCGCC | 1 cut(s) | 515 |
| Ksp22I | TGATCA | 1 cut(s) | 481 |
| KspAI | GTTAAC | 1 cut(s) | 405 |
| Kzo9I | GATC | 3 cut(s) | 109, 189, 481 |
| LmnI | GCTCC | 1 cut(s) | 463 |
| Lsp1109I | GCAGC | 3 cut(s) | 443, 892, 1084 |
| LweI | GCATC | 3 cut(s) | 385, 857, 951 |
| MabI | ACCWGGT | 1 cut(s) | 1032 |
| MaeI | CTAG | 4 cut(s) | 89, 140, 309, 650 |
| MaeIII | GTNAC | 2 cut(s) | 220, 276 |
| MalI | GATC | 3 cut(s) | 111, 191, 483 |
| MboI | GATC | 3 cut(s) | 109, 189, 481 |
| MboII | GAAGA | 8 cut(s) | 104, 847, 962, 988, 1088, 1157, 1196, 1222 |
| MfeI | CAATTG | 2 cut(s) | 18, 945 |
| MlsI | TGGCCA | 1 cut(s) | 48 |
| MluNI | TGGCCA | 1 cut(s) | 48 |
| Mly113I | GGCGCC | 1 cut(s) | 516 |
| MmeI | TCCRAC | 2 cut(s) | 517, 985 |
| Mox20I | TGGCCA | 1 cut(s) | 48 |
| MscI | TGGCCA | 1 cut(s) | 48 |
| MseI | TTAA | 5 cut(s) | 404, 660, 1013, 1154, 1190 |
| MslI | CAYNNNNRTG | 2 cut(s) | 750, 782 |
| Msp20I | TGGCCA | 1 cut(s) | 48 |
| MspI | CCGG | 1 cut(s) | 258 |
| MspR9I | CCNGG | 4 cut(s) | 259, 507, 606, 1034 |
| MunI | CAATTG | 2 cut(s) | 18, 945 |
| MvaI | CCWGG | 3 cut(s) | 507, 606, 1034 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 166, 239, 456, 1235 |
| NarI | GGCGCC | 1 cut(s) | 516 |
| NciI | CCSGG | 1 cut(s) | 259 |
| NdeII | GATC | 3 cut(s) | 109, 189, 481 |
| NlaIII | CATG | 2 cut(s) | 133, 749 |
| NlaIV | GGNNCC | 3 cut(s) | 517, 827, 1086 |
| NmuCI | GTSAC | 1 cut(s) | 220 |
| NotI | GCGGCCGC | 1 cut(s) | 581 |
| PaeR7I | CTCGAG | 1 cut(s) | 451 |
| PceI | AGGCCT | 1 cut(s) | 1229 |
| PfeI | GAWTC | 1 cut(s) | 642 |
| PflFI | GACNNNGTC | 1 cut(s) | 226 |
| PkrI | GCNGC | 5 cut(s) | 458, 582, 585, 882, 1099 |
| PluTI | GGCGCC | 1 cut(s) | 519 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1110 |
| Psp6I | CCWGG | 3 cut(s) | 505, 604, 1032 |
| PspGI | CCWGG | 3 cut(s) | 505, 604, 1032 |
| PspN4I | GGNNCC | 3 cut(s) | 517, 827, 1086 |
| PspPI | GGNCC | 1 cut(s) | 503 |
| PspXI | VCTCGAGB | 1 cut(s) | 451 |
| PstI | CTGCAG | 3 cut(s) | 429, 461, 1102 |
| PsyI | GACNNNGTC | 1 cut(s) | 226 |
| RsaI | GTAC | 2 cut(s) | 895, 908 |
| RsaNI | GTAC | 2 cut(s) | 894, 907 |
| RseI | CAYNNNNRTG | 2 cut(s) | 750, 782 |
| SaqAI | TTAA | 5 cut(s) | 404, 660, 1013, 1154, 1190 |
| SatI | GCNGC | 5 cut(s) | 457, 581, 584, 881, 1098 |
| Sau3AI | GATC | 3 cut(s) | 109, 189, 481 |
| Sau96I | GGNCC | 1 cut(s) | 503 |
| ScrFI | CCNGG | 4 cut(s) | 259, 507, 606, 1034 |
| SexAI | ACCWGGT | 1 cut(s) | 1032 |
| SfaNI | GCATC | 3 cut(s) | 385, 857, 951 |
| SfcI | CTRYAG | 7 cut(s) | 357, 425, 457, 525, 861, 875, 1098 |
| SfoI | GGCGCC | 1 cut(s) | 517 |
| Sfr274I | CTCGAG | 1 cut(s) | 451 |
| SlaI | CTCGAG | 1 cut(s) | 451 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 750, 782 |
| SmlI | CTYRAG | 1 cut(s) | 451 |
| SmoI | CTYRAG | 1 cut(s) | 451 |
| SseBI | AGGCCT | 1 cut(s) | 1229 |
| SsiI | CCGC | 3 cut(s) | 392, 580, 584 |
| SspDI | GGCGCC | 1 cut(s) | 515 |
| SspI | AATATT | 2 cut(s) | 295, 665 |
| SspMI | CTAG | 4 cut(s) | 89, 140, 309, 650 |
| StuI | AGGCCT | 1 cut(s) | 1229 |
| StyD4I | CCNGG | 4 cut(s) | 257, 505, 604, 1032 |
| StyI | CCWWGG | 2 cut(s) | 200, 408 |
| TaaI | ACNGT | 4 cut(s) | 361, 402, 865, 1109 |
| TaqI | TCGA | 4 cut(s) | 192, 452, 851, 1021 |
| TatI | WGTACW | 2 cut(s) | 893, 906 |
| TauI | GCSGC | 2 cut(s) | 583, 586 |
| TfiI | GAWTC | 1 cut(s) | 642 |
| Tru1I | TTAA | 5 cut(s) | 404, 660, 1013, 1154, 1190 |
| Tru9I | TTAA | 5 cut(s) | 404, 660, 1013, 1154, 1190 |
| TscAI | CASTG | 5 cut(s) | 70, 366, 382, 429, 906 |
| TseFI | GTSAC | 1 cut(s) | 220 |
| TseI | GCWGC | 3 cut(s) | 456, 880, 1097 |
| Tsp45I | GTSAC | 1 cut(s) | 220 |
| TspDTI | ATGAA | 4 cut(s) | 146, 608, 738, 1182 |
| TspGWI | ACGGA | 1 cut(s) | 772 |
| TspRI | CASTG | 5 cut(s) | 70, 366, 382, 429, 906 |
| Tth111I | GACNNNGTC | 1 cut(s) | 226 |
| XapI | RAATTY | 4 cut(s) | 134, 726, 1042, 1135 |
| XhoI | CTCGAG | 1 cut(s) | 451 |
| XspI | CTAG | 4 cut(s) | 89, 140, 309, 650 |