Rh4CG238600

Protein mrp homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
48335925 .. 48348903
12979 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG238600.1

Sequence Viewer

Length: 207 bp
ATGAAGCAACTCCACAGAAGCTTCATTCTTTTCTTAGCCTTATTATCATCCCCAGTGATATTCAGCAACACCGAGTCCTCATTGGAGTTTGAGCAAAAGGCAAATGAGGTGGTGATCGAGCTTCCTTGGGTCAAGAATGTCATTGTGACTATGTCAGCACAACCTGCACAACCCCTTTATGCCAGGCAACTTCCACAAGAGTTCTAG

Protein Analysis

68

Amino Acids

7.8

Weight (kDa)

5.65

Isoelectric Point (pI)

79.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 172
AjnI CCWGG 1 cut(s) 182
AluBI AGCT 2 cut(s) 21, 121
AluI AGCT 2 cut(s) 21, 121
AsuHPI GGTGA 1 cut(s) 124
BciT130I CCWGG 1 cut(s) 184
BfaI CTAG 1 cut(s) 205
BfuAI ACCTGC 1 cut(s) 172
Bme1390I CCNGG 1 cut(s) 184
BmrFI CCNGG 1 cut(s) 184
BmrI ACTGGG 1 cut(s) 47
BmuI ACTGGG 1 cut(s) 47
BsaJI CCNNGG 1 cut(s) 125
Bse1I ACTGG 1 cut(s) 53
BseBI CCWGG 1 cut(s) 184
BseDI CCNNGG 1 cut(s) 125
BseGI GGATG 1 cut(s) 47
BseNI ACTGG 1 cut(s) 53
BsgI GTGCAG 1 cut(s) 150
Bsp143I GATC 1 cut(s) 114
BspMI ACCTGC 1 cut(s) 172
BsrI ACTGG 1 cut(s) 53
BssECI CCNNGG 1 cut(s) 125
BssMI GATC 1 cut(s) 114
BssT1I CCWWGG 1 cut(s) 125
Bst2UI CCWGG 1 cut(s) 184
BstAPI GCANNNNNTGC 1 cut(s) 164
BstDEI CTNAG 1 cut(s) 34
BstF5I GGATG 1 cut(s) 47
BstKTI GATC 1 cut(s) 117
BstMBI GATC 1 cut(s) 114
BstMWI GCNNNNNNNGC 1 cut(s) 164
BstNI CCWGG 1 cut(s) 184
BstSCI CCNGG 1 cut(s) 182
BtsCI GGATG 1 cut(s) 47
BtsIMutI CAGTG 1 cut(s) 60
BveI ACCTGC 1 cut(s) 172
CspCI CAANNNNNGTGG 2 cut(s) 90, 125
CviJI RGCY 3 cut(s) 21, 38, 121
CviKI_1 RGCY 3 cut(s) 21, 38, 121
DdeI CTNAG 1 cut(s) 34
DpnI GATC 1 cut(s) 116
DpnII GATC 1 cut(s) 114
Eco130I CCWWGG 1 cut(s) 125
EcoRII CCWGG 1 cut(s) 182
EcoT14I CCWWGG 1 cut(s) 125
ErhI CCWWGG 1 cut(s) 125
FaiI YATR 2 cut(s) 152, 180
FokI GGATG 1 cut(s) 34
FspBI CTAG 1 cut(s) 205
HindIII AAGCTT 1 cut(s) 19
HinfI GANTC 1 cut(s) 74
HphI GGTGA 1 cut(s) 124
Hpy188III TCNNGA 1 cut(s) 133
HpyCH4V TGCA 1 cut(s) 167
HpyF10VI GCNNNNNNNGC 1 cut(s) 164
HpyF3I CTNAG 1 cut(s) 34
Kzo9I GATC 1 cut(s) 114
LpnPI CCDG 4 cut(s) 66, 169, 177, 196
MaeI CTAG 1 cut(s) 205
MaeIII GTNAC 1 cut(s) 145
MalI GATC 1 cut(s) 116
MboI GATC 1 cut(s) 114
MlyI GAGTC 1 cut(s) 83
MnlI CCTC 2 cut(s) 88, 100
MspR9I CCNGG 1 cut(s) 184
MvaI CCWGG 1 cut(s) 184
MwoI GCNNNNNNNGC 1 cut(s) 164
NdeII GATC 1 cut(s) 114
NmuCI GTSAC 1 cut(s) 145
PflFI GACNNNGTC 1 cut(s) 151
PleI GAGTC 1 cut(s) 82
PpsI GAGTC 1 cut(s) 82
Psp6I CCWGG 1 cut(s) 182
PspGI CCWGG 1 cut(s) 182
PsyI GACNNNGTC 1 cut(s) 151
Sau3AI GATC 1 cut(s) 114
SchI GAGTC 1 cut(s) 83
ScrFI CCNGG 1 cut(s) 184
SetI ASST 4 cut(s) 23, 111, 123, 166
SgeI CNNG 8 cut(s) 65, 85, 130, 138, 145, 176, 195, 196
SspMI CTAG 1 cut(s) 205
StyD4I CCNGG 1 cut(s) 182
StyI CCWWGG 1 cut(s) 125
TaqI TCGA 1 cut(s) 117
TscAI CASTG 1 cut(s) 60
TseFI GTSAC 1 cut(s) 145
Tsp45I GTSAC 1 cut(s) 145
TspDTI ATGAA 2 cut(s) 13, 17
TspRI CASTG 1 cut(s) 60
Tth111I GACNNNGTC 1 cut(s) 151
XspI CTAG 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.