RLG00000019204

CRM domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
48318764 .. 48319650
887 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019204

Sequence Viewer

Length: 354 bp
ATGGTACAGAGAAGCTTAGAGCAAAATCGTGAAGCTGCTGGCAAAAGTCGTATGAGGAAAAAGGCTTATGTCCAGCAACTAGAAACAAGCCGTTTAAAACTGACGCAACTGGAGCTGGAACTGGACAGGACTGGAAAACAGGCTTTGGATAAATCGAAGAATATGGATGGCCTTCGAGTAGTAAAGAAGCACATTCAGAAGCTGGAATACGACCTTGAGTTGCTTAAAGCACATGCTAAAAGAAATGTTGAATTTAGTTTTGATGCTATTGAAGAAACTCCAGAAGATATTGAGAGTGTAAGAGTTTGGGAGCTCCTCAAACTTCAAGCTTCTCATACTCCAATGAGGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

13.72

Weight (kDa)

9.39

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 251
AfaI GTAC 1 cut(s) 6
AgsI TTSAA 3 cut(s) 251, 272, 326
AluBI AGCT 6 cut(s) 15, 35, 115, 202, 313, 329
AluI AGCT 6 cut(s) 15, 35, 115, 202, 313, 329
Alw21I GWGCWC 1 cut(s) 315
AlwNI CAGNNNCTG 1 cut(s) 202
AoxI GGCC 2 cut(s) 169, 347
ApeKI GCWGC 1 cut(s) 35
ApoI RAATTY 1 cut(s) 251
BanII GRGCYC 1 cut(s) 315
BarI GAAGNNNNNNTAC 2 cut(s) 191, 223
Bbv12I GWGCWC 1 cut(s) 315
BbvI GCAGC 1 cut(s) 22
BccI CCATC 1 cut(s) 161
BceAI ACGGC 1 cut(s) 75
BfaI CTAG 1 cut(s) 80
BisI GCNGC 1 cut(s) 36
BlsI GCNGC 1 cut(s) 37
BmsI GCATC 1 cut(s) 253
BpmI CTGGAG 2 cut(s) 131, 264
BpuEI CTTGAG 1 cut(s) 236
Bse1I ACTGG 3 cut(s) 114, 126, 136
BseGI GGATG 1 cut(s) 172
BseNI ACTGG 3 cut(s) 114, 126, 136
BseRI GAGGAG 1 cut(s) 305
BseXI GCAGC 1 cut(s) 22
BshFI GGCC 2 cut(s) 171, 349
BsiHKAI GWGCWC 1 cut(s) 315
BsnI GGCC 2 cut(s) 171, 349
Bsp1286I GDGCHC 1 cut(s) 315
BspANI GGCC 2 cut(s) 171, 349
BsrI ACTGG 3 cut(s) 114, 126, 136
BstC8I GCNNGC 1 cut(s) 40
BstDEI CTNAG 1 cut(s) 16
BstF5I GGATG 1 cut(s) 172
BstMWI GCNNNNNNNGC 1 cut(s) 112
BstNSI RCATGY 1 cut(s) 236
BstV1I GCAGC 1 cut(s) 22
BsuRI GGCC 2 cut(s) 171, 349
BtsCI GGATG 1 cut(s) 172
Cac8I GCNNGC 1 cut(s) 40
CaiI CAGNNNCTG 1 cut(s) 202
CseI GACGC 1 cut(s) 112
Csp6I GTAC 1 cut(s) 5
CviAII CATG 2 cut(s) 233, 351
CviQI GTAC 1 cut(s) 5
DdeI CTNAG 1 cut(s) 16
DraI TTTAAA 1 cut(s) 96
Ecl136II GAGCTC 1 cut(s) 313
Eco24I GRGCYC 1 cut(s) 315
Eco53kI GAGCTC 1 cut(s) 313
EcoICRI GAGCTC 1 cut(s) 313
EcoT38I GRGCYC 1 cut(s) 315
FaeI CATG 2 cut(s) 236, 354
FaiI YATR 6 cut(s) 53, 69, 164, 234, 336, 352
FatI CATG 2 cut(s) 232, 350
Fnu4HI GCNGC 1 cut(s) 36
FokI GGATG 1 cut(s) 179
FriOI GRGCYC 1 cut(s) 315
Fsp4HI GCNGC 1 cut(s) 36
FspBI CTAG 1 cut(s) 80
GluI GCNGC 1 cut(s) 36
GsuI CTGGAG 2 cut(s) 131, 264
HaeIII GGCC 2 cut(s) 171, 349
HgaI GACGC 1 cut(s) 112
Hin1II CATG 2 cut(s) 236, 354
HindIII AAGCTT 2 cut(s) 13, 327
Hpy188I TCNGA 1 cut(s) 198
Hpy188III TCNNGA 2 cut(s) 29, 281
HpyAV CCTTC 1 cut(s) 182
HpyF10VI GCNNNNNNNGC 1 cut(s) 112
HpyF3I CTNAG 1 cut(s) 16
Hsp92II CATG 2 cut(s) 236, 354
LmnI GCTCC 3 cut(s) 112, 310, 318
Lsp1109I GCAGC 1 cut(s) 22
LweI GCATC 1 cut(s) 253
MaeI CTAG 1 cut(s) 80
MboII GAAGA 3 cut(s) 169, 284, 296
MhlI GDGCHC 1 cut(s) 315
MluCI AATT 1 cut(s) 251
MnlI CCTC 3 cut(s) 48, 326, 339
MseI TTAA 2 cut(s) 95, 225
MwoI GCNNNNNNNGC 1 cut(s) 112
NlaIII CATG 2 cut(s) 236, 354
NspI RCATGY 1 cut(s) 236
PkrI GCNGC 1 cut(s) 37
Psp124BI GAGCTC 1 cut(s) 315
PstNI CAGNNNCTG 1 cut(s) 202
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
SacI GAGCTC 1 cut(s) 315
SaqAI TTAA 2 cut(s) 95, 225
SatI GCNGC 1 cut(s) 36
SduI GDGCHC 1 cut(s) 315
SetI ASST 7 cut(s) 17, 37, 117, 204, 216, 315, 331
SfaNI GCATC 1 cut(s) 253
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
Sse9I AATT 1 cut(s) 251
SspMI CTAG 1 cut(s) 80
SstI GAGCTC 1 cut(s) 315
TaqI TCGA 2 cut(s) 155, 175
TasI AATT 1 cut(s) 251
Tru1I TTAA 2 cut(s) 95, 225
Tru9I TTAA 2 cut(s) 95, 225
TseI GCWGC 1 cut(s) 35
XapI RAATTY 1 cut(s) 251
XceI RCATGY 1 cut(s) 236
XspI CTAG 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.