Rh2BG577700

Protein mrp homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
79449664 .. 79452919
3256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG577700.1

Sequence Viewer

Length: 354 bp
ATGCAGAGCATTGAGGCAATTGCAATTGATTTGGCATACTTGTATGGCCACTACCCCAAGCTCAGTGATACCAATGTCTTTCGTGTTCTAGCTACTGCTTCTTTTCTTGATCTTCAGGTTTGCAAATCCATGAAATTTCTAGTTGGTGGTGCTTCCTTGAAGTTTGAGCAAAAGGCAAATGAGGTGGTGATCGAGCTTCCTTGGGTCAAGAATGTCATTGTGACTATGTCAGCACAACCTGCACAACCCCTTTATGCCGGGCAACTTCCACAAGAGTTACAGACAATTTCAAATATTGTGGCAGTTTCTAGTTGCAAGGTTCTCAAAATATGGGTTGGAGGTGGACAAGATTGA

Protein Analysis

117

Amino Acids

12.79

Weight (kDa)

6.55

Isoelectric Point (pI)

49.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 247
AcoI YGGCCR 1 cut(s) 46
AcsI RAATTY 1 cut(s) 134
AcuI CTGAAG 1 cut(s) 98
AgsI TTSAA 2 cut(s) 160, 291
AluBI AGCT 3 cut(s) 61, 92, 196
AluI AGCT 3 cut(s) 61, 92, 196
AoxI GGCC 1 cut(s) 46
ApoI RAATTY 1 cut(s) 134
AsuC2I CCSGG 1 cut(s) 259
AsuHPI GGTGA 1 cut(s) 199
BaeI ACNNNNGTAYC 2 cut(s) 60, 93
BalI TGGCCA 1 cut(s) 48
BcnI CCSGG 1 cut(s) 259
BfaI CTAG 3 cut(s) 89, 140, 309
BfuAI ACCTGC 1 cut(s) 247
Bme1390I CCNGG 1 cut(s) 259
BmrFI CCNGG 1 cut(s) 259
BpuMI CCSGG 1 cut(s) 259
BsaJI CCNNGG 1 cut(s) 200
BseDI CCNNGG 1 cut(s) 200
BseMII CTCAG 1 cut(s) 76
BsgI GTGCAG 1 cut(s) 225
BshFI GGCC 1 cut(s) 48
BsiSI CCGG 1 cut(s) 258
BsnI GGCC 1 cut(s) 48
Bsp143I GATC 2 cut(s) 109, 189
BspANI GGCC 1 cut(s) 48
BspCNI CTCAG 1 cut(s) 75
BspMI ACCTGC 1 cut(s) 247
BssECI CCNNGG 1 cut(s) 200
BssMI GATC 2 cut(s) 109, 189
BssT1I CCWWGG 1 cut(s) 200
BstAPI GCANNNNNTGC 1 cut(s) 239
BstDEI CTNAG 1 cut(s) 62
BstKTI GATC 2 cut(s) 112, 192
BstMBI GATC 2 cut(s) 109, 189
BstMWI GCNNNNNNNGC 1 cut(s) 239
BstSCI CCNGG 1 cut(s) 257
BsuRI GGCC 1 cut(s) 48
BtsIMutI CAGTG 1 cut(s) 70
BveI ACCTGC 1 cut(s) 247
CspCI CAANNNNNGTGG 4 cut(s) 165, 200, 279, 314
CviAII CATG 1 cut(s) 130
CviJI RGCY 4 cut(s) 48, 61, 92, 196
CviKI_1 RGCY 4 cut(s) 48, 61, 92, 196
DdeI CTNAG 1 cut(s) 62
DpnI GATC 2 cut(s) 111, 191
DpnII GATC 2 cut(s) 109, 189
EaeI YGGCCR 1 cut(s) 46
Eco130I CCWWGG 1 cut(s) 200
Eco57I CTGAAG 1 cut(s) 98
EcoT14I CCWWGG 1 cut(s) 200
ErhI CCWWGG 1 cut(s) 200
FaeI CATG 1 cut(s) 133
FaiI YATR 6 cut(s) 37, 45, 131, 227, 255, 331
FatI CATG 1 cut(s) 129
FspBI CTAG 3 cut(s) 89, 140, 309
HaeIII GGCC 1 cut(s) 48
HapII CCGG 1 cut(s) 258
Hin1II CATG 1 cut(s) 133
HpaII CCGG 1 cut(s) 258
HphI GGTGA 1 cut(s) 199
Hpy166II GTNNAC 1 cut(s) 344
Hpy188III TCNNGA 2 cut(s) 107, 208
Hpy8I GTNNAC 1 cut(s) 344
HpyCH4V TGCA 5 cut(s) 4, 23, 123, 242, 315
HpyF10VI GCNNNNNNNGC 1 cut(s) 239
HpyF3I CTNAG 1 cut(s) 62
Hsp92II CATG 1 cut(s) 133
Kzo9I GATC 2 cut(s) 109, 189
LpnPI CCDG 3 cut(s) 101, 252, 271
MaeI CTAG 3 cut(s) 89, 140, 309
MaeIII GTNAC 2 cut(s) 220, 276
MalI GATC 2 cut(s) 111, 191
MboI GATC 2 cut(s) 109, 189
MboII GAAGA 1 cut(s) 104
MfeI CAATTG 2 cut(s) 18, 24
MlsI TGGCCA 1 cut(s) 48
MluCI AATT 4 cut(s) 18, 24, 134, 285
MluNI TGGCCA 1 cut(s) 48
MmeI TCCRAC 1 cut(s) 316
MnlI CCTC 3 cut(s) 7, 175, 332
Mox20I TGGCCA 1 cut(s) 48
MscI TGGCCA 1 cut(s) 48
Msp20I TGGCCA 1 cut(s) 48
MspI CCGG 1 cut(s) 258
MspR9I CCNGG 1 cut(s) 259
MunI CAATTG 2 cut(s) 18, 24
MwoI GCNNNNNNNGC 1 cut(s) 239
NciI CCSGG 1 cut(s) 259
NdeII GATC 2 cut(s) 109, 189
NlaIII CATG 1 cut(s) 133
NmuCI GTSAC 1 cut(s) 220
PflFI GACNNNGTC 1 cut(s) 226
PsyI GACNNNGTC 1 cut(s) 226
Sau3AI GATC 2 cut(s) 109, 189
ScrFI CCNGG 1 cut(s) 259
SetI ASST 8 cut(s) 63, 94, 120, 186, 198, 241, 321, 343
Sse9I AATT 4 cut(s) 18, 24, 134, 285
SspI AATATT 1 cut(s) 295
SspMI CTAG 3 cut(s) 89, 140, 309
StyD4I CCNGG 1 cut(s) 257
StyI CCWWGG 1 cut(s) 200
TaqI TCGA 1 cut(s) 192
TasI AATT 4 cut(s) 18, 24, 134, 285
TscAI CASTG 1 cut(s) 70
TseFI GTSAC 1 cut(s) 220
Tsp45I GTSAC 1 cut(s) 220
TspDTI ATGAA 1 cut(s) 146
TspRI CASTG 1 cut(s) 70
Tth111I GACNNNGTC 1 cut(s) 226
XapI RAATTY 1 cut(s) 134
XspI CTAG 3 cut(s) 89, 140, 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.