AT1G26320

NADP-dependent alkenal double bond reductase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
9105038 .. 9107231
2194 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26320.2

Sequence Viewer

Length: 1056 bp
ATGACGAACGCAGAAGCAGTAACGGTGACCAACAAGCAAATCATATTCCCAGACTATGTTACTGGATTTCCAAAAGAATCTGATCTTAAAATAACCACAACTACCATTGATCTAAGGCTTCCGGAGGGATCCACCTCAGTACTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTACATGCGCATTTGCATGGGAAAGCCCGATCCCTTGTCTTCTTCCCTTGTTCCACCTTACAAGACCGGCGTGCCAATCATTGGGCTTGGAGTGTCTAAAGTGATTGATTCAGGACATCCAGATTACAAAAAGGGAGACTTACTTTGGGGACTAGTTGGATGGGAGGAGTACAGTGTTATTACTTTAACTACTTACTCACACTTCAAAATCGAACATACCGATGTTCCATTATCTTACTACACTGGACTTCTTGGTATGCCTGGTATGACTGCTTATGCTGGATTTTACGAAGTTTGTTCACCTAAAAAAGGAGAGACTGTCTTCGTGTCAGCTGCATCCGGCGCGGTTGGTCAGCTCGTGGGACAATTTGCAAAGTTGATGGGTTGTTATGTCGTTGGTAGTGCTGGCAGTAAAGAAAAGGTTTATCTACTCAAGACAAAGTTTGGGTTTGATGATGCTTTCAATTACAAGGAAGAGAAGGACTTTAGTGCTGCCCTAAAGAGGTATTTTCCGGAAGGGATCGACATATATTTTGAGAACGTTGGAGGCAAAATGTTAGATGCCGTACTCATAAACATGAAGTTGCATGGTCGTGTCGCAGTATGTGGAATGATCTCACAGTATAATTTAGTGGATCCAGAAGGCGTACACAACTTACCCACCATTCTTTACAAGAGGATACAACTTCAAGGGTTTGGTGTTTGTGATTTCTACGACAAATATCCTAAGTTTTTGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAACATACGTTGAGGATATAGCGGAAGGATTCGAGAGTGGACCTTCTGCTCTTTTAGGACTCTTCGAAGGTAAGAACGTCGGGAAACAACTATTTGTGGTTGCTCGTGAGTGA

Protein Analysis

351

Amino Acids

38.76

Weight (kDa)

5.84

Isoelectric Point (pI)

29.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 12 - 120 4.2e-22 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 173 - 301 5.9e-22 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 182
AccB7I CCANNNNNTGG 1 cut(s) 254
AccII CGCG 1 cut(s) 518
AccIII TCCGGA 2 cut(s) 121, 685
AciI CCGC 2 cut(s) 518, 965
AclI AACGTT 1 cut(s) 714
AclWI GGATC 7 cut(s) 123, 136, 164, 197, 701, 803, 816
AfaI GTAC 4 cut(s) 141, 344, 741, 822
AfiI CCNNNNNNNGG 3 cut(s) 254, 482, 675
AgsI TTSAA 3 cut(s) 379, 637, 863
AhlI ACTAGT 1 cut(s) 325
AjnI CCWGG 1 cut(s) 433
AluBI AGCT 2 cut(s) 506, 529
AluI AGCT 2 cut(s) 506, 529
Alw26I GTCTC 2 cut(s) 303, 482
AlwI GGATC 7 cut(s) 123, 136, 164, 197, 701, 803, 816
Aor13HI TCCGGA 2 cut(s) 121, 685
ApeKI GCWGC 2 cut(s) 506, 665
ArsI GACNNNNNNTTYG 2 cut(s) 689, 721
AspLEI GCGC 2 cut(s) 183, 518
AspS9I GGNCC 1 cut(s) 983
AsuHPI GGTGA 3 cut(s) 37, 157, 465
AsuII TTCGAA 1 cut(s) 1008
AvaII GGWCC 1 cut(s) 983
BamHI GGATCC 2 cut(s) 128, 808
BarI GAAGNNNNNNTAC 4 cut(s) 140, 172, 932, 964
BauI CACGAG 2 cut(s) 530, 1047
BbsI GAAGAC 2 cut(s) 204, 487
BbvI GCAGC 2 cut(s) 493, 652
BccI CCATC 2 cut(s) 327, 547
BceAI ACGGC 1 cut(s) 722
BciT130I CCWGG 1 cut(s) 435
BciVI GTATCC 1 cut(s) 846
BcoDI GTCTC 2 cut(s) 303, 482
BcuI ACTAGT 1 cut(s) 325
BfaI CTAG 1 cut(s) 326
BfuI GTATCC 1 cut(s) 846
BisI GCNGC 2 cut(s) 507, 666
BlsI GCNGC 2 cut(s) 508, 667
BmcAI AGTACT 1 cut(s) 141
Bme1390I CCNGG 1 cut(s) 435
Bme18I GGWCC 1 cut(s) 983
BmgT120I GGNCC 1 cut(s) 983
BmiI GGNNCC 2 cut(s) 130, 810
BmrFI CCNGG 1 cut(s) 435
BmsI GCATC 3 cut(s) 518, 619, 724
BpiI GAAGAC 2 cut(s) 204, 487
Bpu14I TTCGAA 1 cut(s) 1008
BpuEI CTTGAG 1 cut(s) 590
BsaWI WCCGGW 2 cut(s) 121, 685
BsaXI ACNNNNNCTCC 2 cut(s) 477, 507
Bsc4I CCNNNNNNNGG 3 cut(s) 254, 482, 675
Bse118I RCCGGY 1 cut(s) 239
Bse1I ACTGG 3 cut(s) 67, 147, 421
BseAI TCCGGA 2 cut(s) 121, 685
BseBI CCWGG 1 cut(s) 435
BseGI GGATG 3 cut(s) 289, 338, 509
BseLI CCNNNNNNNGG 3 cut(s) 254, 482, 675
BseMII CTCAG 1 cut(s) 150
BseNI ACTGG 3 cut(s) 67, 147, 421
BseRI GAGGAG 1 cut(s) 353
BseXI GCAGC 2 cut(s) 493, 652
Bsh1236I CGCG 1 cut(s) 518
BsiSI CCGG 4 cut(s) 122, 240, 513, 686
BslFI GGGAC 2 cut(s) 336, 549
BslI CCNNNNNNNGG 3 cut(s) 254, 482, 675
BsmAI GTCTC 2 cut(s) 303, 482
BsmFI GGGAC 2 cut(s) 336, 549
Bsp119I TTCGAA 1 cut(s) 1008
Bsp13I TCCGGA 2 cut(s) 121, 685
Bsp143I GATC 8 cut(s) 82, 109, 128, 169, 202, 693, 786, 808
BspACI CCGC 2 cut(s) 518, 965
BspCNI CTCAG 1 cut(s) 149
BspEI TCCGGA 2 cut(s) 121, 685
BspFNI CGCG 1 cut(s) 518
BspLI GGNNCC 2 cut(s) 130, 810
BspPI GGATC 7 cut(s) 123, 136, 164, 197, 701, 803, 816
BspT104I TTCGAA 1 cut(s) 1008
BsrFI RCCGGY 1 cut(s) 239
BsrI ACTGG 3 cut(s) 67, 147, 421
BssAI RCCGGY 1 cut(s) 239
BssMI GATC 8 cut(s) 82, 109, 128, 169, 202, 693, 786, 808
BssSI CACGAG 2 cut(s) 530, 1047
Bst2BI CACGAG 2 cut(s) 530, 1047
Bst2UI CCWGG 1 cut(s) 435
Bst4CI ACNGT 4 cut(s) 25, 347, 493, 795
Bst6I CTCTTC 2 cut(s) 642, 1010
BstBI TTCGAA 1 cut(s) 1008
BstC8I GCNNGC 2 cut(s) 245, 580
BstDEI CTNAG 3 cut(s) 113, 136, 900
BstEII GGTNACC 1 cut(s) 25
BstENI CCTNNNNNAGG 1 cut(s) 480
BstF5I GGATG 3 cut(s) 289, 338, 509
BstFNI CGCG 1 cut(s) 518
BstHHI GCGC 2 cut(s) 183, 518
BstKTI GATC 8 cut(s) 85, 112, 131, 172, 205, 696, 789, 811
BstMAI GTCTC 2 cut(s) 303, 482
BstMBI GATC 8 cut(s) 82, 109, 128, 169, 202, 693, 786, 808
BstMWI GCNNNNNNNGC 1 cut(s) 515
BstNI CCWGG 1 cut(s) 435
BstNSI RCATGY 1 cut(s) 181
BstPI GGTNACC 1 cut(s) 25
BstSCI CCNGG 1 cut(s) 433
BstUI CGCG 1 cut(s) 518
BstV1I GCAGC 2 cut(s) 493, 652
BstV2I GAAGAC 2 cut(s) 204, 487
BstX2I RGATCY 2 cut(s) 128, 808
BstYI RGATCY 2 cut(s) 128, 808
BsuI GTATCC 1 cut(s) 846
BtsCI GGATG 3 cut(s) 289, 338, 509
BtsIMutI CAGTG 2 cut(s) 352, 414
Cac8I GCNNGC 2 cut(s) 245, 580
CfoI GCGC 2 cut(s) 183, 518
Cfr10I RCCGGY 1 cut(s) 239
Cfr13I GGNCC 1 cut(s) 983
Csp6I GTAC 4 cut(s) 140, 343, 740, 821
CviAII CATG 4 cut(s) 178, 190, 751, 761
CviJI RGCY 5 cut(s) 118, 199, 259, 506, 529
CviKI_1 RGCY 5 cut(s) 118, 199, 259, 506, 529
CviQI GTAC 4 cut(s) 140, 343, 740, 821
DdeI CTNAG 3 cut(s) 113, 136, 900
DpnI GATC 8 cut(s) 84, 111, 130, 171, 204, 695, 788, 810
DpnII GATC 8 cut(s) 82, 109, 128, 169, 202, 693, 786, 808
Eam1104I CTCTTC 2 cut(s) 642, 1010
EarI CTCTTC 2 cut(s) 642, 1010
Eco47I GGWCC 1 cut(s) 983
Eco91I GGTNACC 1 cut(s) 25
EcoNI CCTNNNNNAGG 1 cut(s) 480
EcoO65I GGTNACC 1 cut(s) 25
EcoRII CCWGG 1 cut(s) 433
FaeI CATG 4 cut(s) 181, 193, 754, 764
FalI AAGNNNNNCTT 2 cut(s) 296, 328
FaqI GGGAC 2 cut(s) 336, 549
FatI CATG 4 cut(s) 177, 189, 750, 760
Fnu4HI GCNGC 2 cut(s) 507, 666
FokI GGATG 3 cut(s) 276, 345, 496
Fsp4HI GCNGC 2 cut(s) 507, 666
FspAI RTGCGCAY 1 cut(s) 182
FspBI CTAG 1 cut(s) 326
FspI TGCGCA 1 cut(s) 182
GlaI GCGC 2 cut(s) 182, 517
GluI GCNGC 2 cut(s) 507, 666
HapII CCGG 4 cut(s) 122, 240, 513, 686
HhaI GCGC 2 cut(s) 183, 518
Hin1II CATG 4 cut(s) 181, 193, 754, 764
Hin6I GCGC 2 cut(s) 181, 516
HinP1I GCGC 2 cut(s) 181, 516
HinfI GANTC 5 cut(s) 77, 151, 281, 972, 1002
HpaII CCGG 4 cut(s) 122, 240, 513, 686
HphI GGTGA 3 cut(s) 37, 157, 465
Hpy166II GTNNAC 3 cut(s) 473, 823, 983
Hpy188I TCNGA 1 cut(s) 82
Hpy188III TCNNGA 9 cut(s) 122, 285, 293, 607, 686, 812, 976, 1024, 1049
Hpy8I GTNNAC 3 cut(s) 473, 823, 983
Hpy99I CGWCG 1 cut(s) 1025
HpyAV CCTTC 7 cut(s) 646, 683, 809, 929, 962, 996, 1004
HpyCH4III ACNGT 4 cut(s) 25, 347, 493, 795
HpyCH4IV ACGT 3 cut(s) 714, 951, 1020
HpyCH4V TGCA 4 cut(s) 189, 509, 545, 760
HpyF10VI GCNNNNNNNGC 1 cut(s) 515
HpyF3I CTNAG 3 cut(s) 113, 136, 900
HpySE526I ACGT 3 cut(s) 714, 951, 1020
Hsp92II CATG 4 cut(s) 181, 193, 754, 764
HspAI GCGC 2 cut(s) 181, 516
Kpn2I TCCGGA 2 cut(s) 121, 685
Kzo9I GATC 8 cut(s) 82, 109, 128, 169, 202, 693, 786, 808
Lsp1109I GCAGC 2 cut(s) 493, 652
LweI GCATC 3 cut(s) 518, 619, 724
MaeI CTAG 1 cut(s) 326
MaeII ACGT 3 cut(s) 714, 951, 1020
MaeIII GTNAC 3 cut(s) 19, 25, 58
MalI GATC 8 cut(s) 84, 111, 130, 171, 204, 695, 788, 810
MboI GATC 8 cut(s) 82, 109, 128, 169, 202, 693, 786, 808
MboII GAAGA 7 cut(s) 160, 204, 207, 487, 659, 952, 997
MflI RGATCY 2 cut(s) 128, 808
MluCI AATT 3 cut(s) 539, 637, 799
MlyI GAGTC 1 cut(s) 996
MmeI TCCRAC 2 cut(s) 310, 697
MnlI CCTC 7 cut(s) 118, 145, 331, 669, 713, 843, 949
MroI TCCGGA 2 cut(s) 121, 685
MseI TTAA 2 cut(s) 87, 359
MslI CAYNNNNRTG 4 cut(s) 188, 393, 749, 765
MspA1I CMGCKG 1 cut(s) 506
MspI CCGG 4 cut(s) 122, 240, 513, 686
MspR9I CCNGG 1 cut(s) 435
MvaI CCWGG 1 cut(s) 435
MvnI CGCG 1 cut(s) 518
MwoI GCNNNNNNNGC 1 cut(s) 515
NdeII GATC 8 cut(s) 82, 109, 128, 169, 202, 693, 786, 808
NlaIII CATG 4 cut(s) 181, 193, 754, 764
NlaIV GGNNCC 2 cut(s) 130, 810
NmuCI GTSAC 1 cut(s) 25
NsbI TGCGCA 1 cut(s) 182
NspI RCATGY 1 cut(s) 181
NspV TTCGAA 1 cut(s) 1008
PcsI WCGNNNNNNNCGW 1 cut(s) 390
PfeI GAWTC 4 cut(s) 77, 151, 281, 972
PflMI CCANNNNNTGG 1 cut(s) 254
PkrI GCNGC 2 cut(s) 508, 667
PleI GAGTC 1 cut(s) 996
PpsI GAGTC 1 cut(s) 996
Psp1406I AACGTT 1 cut(s) 714
Psp6I CCWGG 1 cut(s) 433
PspEI GGTNACC 1 cut(s) 25
PspGI CCWGG 1 cut(s) 433
PspN4I GGNNCC 2 cut(s) 130, 810
PspPI GGNCC 1 cut(s) 983
PsuI RGATCY 2 cut(s) 128, 808
PvuII CAGCTG 1 cut(s) 506
RsaI GTAC 4 cut(s) 141, 344, 741, 822
RsaNI GTAC 4 cut(s) 140, 343, 740, 821
RseI CAYNNNNRTG 4 cut(s) 188, 393, 749, 765
SaqAI TTAA 2 cut(s) 87, 359
SatI GCNGC 2 cut(s) 507, 666
Sau3AI GATC 8 cut(s) 82, 109, 128, 169, 202, 693, 786, 808
Sau96I GGNCC 1 cut(s) 983
ScaI AGTACT 1 cut(s) 141
SchI GAGTC 1 cut(s) 996
ScrFI CCNGG 1 cut(s) 435
SfaNI GCATC 3 cut(s) 518, 619, 724
SfuI TTCGAA 1 cut(s) 1008
SinI GGWCC 1 cut(s) 983
SmiMI CAYNNNNRTG 4 cut(s) 188, 393, 749, 765
SmlI CTYRAG 1 cut(s) 605
SmoI CTYRAG 1 cut(s) 605
SpeI ACTAGT 1 cut(s) 325
Sse9I AATT 3 cut(s) 539, 637, 799
SsiI CCGC 2 cut(s) 518, 965
SspMI CTAG 1 cut(s) 326
StyD4I CCNGG 1 cut(s) 433
TaaI ACNGT 4 cut(s) 25, 347, 493, 795
TaiI ACGT 3 cut(s) 717, 954, 1023
TaqI TCGA 4 cut(s) 384, 696, 975, 1008
TasI AATT 3 cut(s) 539, 637, 799
TatI WGTACW 2 cut(s) 139, 342
TfiI GAWTC 4 cut(s) 77, 151, 281, 972
Tru1I TTAA 2 cut(s) 87, 359
Tru9I TTAA 2 cut(s) 87, 359
TscAI CASTG 2 cut(s) 352, 421
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 2 cut(s) 506, 665
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 767
TspRI CASTG 2 cut(s) 352, 421
Van91I CCANNNNNTGG 1 cut(s) 254
VpaK11BI GGWCC 1 cut(s) 983
XagI CCTNNNNNAGG 1 cut(s) 480
XceI RCATGY 1 cut(s) 181
XcmI CCANNNNNNNNNTGG 1 cut(s) 139
XspI CTAG 1 cut(s) 326
ZrmI AGTACT 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.