Rh2BG282100

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000431
Physical Location & Seq
Reverse (-)
30967332 .. 30970267
2936 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG282100.1

Sequence Viewer

Length: 330 bp
ATGACGTTAGTGAGAAACAAACAGGTGATATTGAGGAACTATGTCACCACTTTTCCGAAAGATTCGGACTTGTATGTGACCAGCACTACTGCTAGTGTCAAGTTCAAGCTTCCTGCTCACACTATCATTACCACTTCAAAGGAACCAGCCGTCATAGTGAAGAACCTCTACTTGTCTTGCGATCCCTACCAGCGGCTCTTTATGGAAGAAATCCCAGGAGTCGACGAATCTACGTATAGTCAGCGAGTCTACTATACACCCGGCTCGCAGTGGGTGGAGGTGCTTCAATTTTTGCCAAGGAATTGCAAAACCAAGATGGGCCGCCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

109

Amino Acids

12.58

Weight (kDa)

9.33

Isoelectric Point (pI)

45.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 222, 249
AciI CCGC 2 cut(s) 193, 322
AclWI GGATC 1 cut(s) 176
AfiI CCNNNNNNNGG 1 cut(s) 192
AgsI TTSAA 3 cut(s) 106, 138, 287
AjnI CCWGG 1 cut(s) 214
AluBI AGCT 1 cut(s) 109
AluI AGCT 1 cut(s) 109
AlwI GGATC 1 cut(s) 176
AoxI GGCC 1 cut(s) 319
AspS9I GGNCC 1 cut(s) 319
AsuC2I CCSGG 1 cut(s) 261
AsuHPI GGTGA 2 cut(s) 37, 37
BarI GAAGNNNNNNTAC 2 cut(s) 152, 184
BccI CCATC 1 cut(s) 310
BceAI ACGGC 1 cut(s) 134
BciT130I CCWGG 1 cut(s) 216
BcnI CCSGG 1 cut(s) 261
BfaI CTAG 1 cut(s) 93
BisI GCNGC 2 cut(s) 194, 322
BlsI GCNGC 2 cut(s) 195, 323
Bme1390I CCNGG 2 cut(s) 216, 261
BmgT120I GGNCC 1 cut(s) 319
BmiI GGNNCC 1 cut(s) 144
BmrFI CCNGG 2 cut(s) 216, 261
BpuMI CCSGG 1 cut(s) 261
BsaAI YACGTR 1 cut(s) 234
BsaJI CCNNGG 2 cut(s) 214, 296
Bsc4I CCNNNNNNNGG 1 cut(s) 192
BseBI CCWGG 1 cut(s) 216
BseDI CCNNGG 2 cut(s) 214, 296
BseLI CCNNNNNNNGG 1 cut(s) 192
BshFI GGCC 1 cut(s) 321
BsiSI CCGG 1 cut(s) 261
BslI CCNNNNNNNGG 1 cut(s) 192
BsnI GGCC 1 cut(s) 321
Bsp143I GATC 1 cut(s) 181
BspACI CCGC 2 cut(s) 193, 322
BspANI GGCC 1 cut(s) 321
BspLI GGNNCC 1 cut(s) 144
BspPI GGATC 1 cut(s) 176
BssECI CCNNGG 2 cut(s) 214, 296
BssMI GATC 1 cut(s) 181
BssT1I CCWWGG 1 cut(s) 296
Bst2UI CCWGG 1 cut(s) 216
BstBAI YACGTR 1 cut(s) 234
BstC8I GCNNGC 1 cut(s) 266
BstKTI GATC 1 cut(s) 184
BstMBI GATC 1 cut(s) 181
BstNI CCWGG 1 cut(s) 216
BstSCI CCNGG 2 cut(s) 214, 259
BstSNI TACGTA 1 cut(s) 234
BsuRI GGCC 1 cut(s) 321
BtsI GCAGTG 1 cut(s) 275
BtsIMutI CAGTG 1 cut(s) 275
Cac8I GCNNGC 1 cut(s) 266
Cfr13I GGNCC 1 cut(s) 319
CviJI RGCY 5 cut(s) 109, 149, 196, 264, 321
CviKI_1 RGCY 5 cut(s) 109, 149, 196, 264, 321
DpnI GATC 1 cut(s) 183
DpnII GATC 1 cut(s) 181
Eco105I TACGTA 1 cut(s) 234
Eco130I CCWWGG 1 cut(s) 296
EcoRII CCWGG 1 cut(s) 214
EcoT14I CCWWGG 1 cut(s) 296
ErhI CCWWGG 1 cut(s) 296
FaiI YATR 7 cut(s) 42, 75, 155, 203, 237, 255, 328
FblI GTMKAC 2 cut(s) 222, 249
Fnu4HI GCNGC 2 cut(s) 194, 322
Fsp4HI GCNGC 2 cut(s) 194, 322
FspBI CTAG 1 cut(s) 93
GluI GCNGC 2 cut(s) 194, 322
HaeIII GGCC 1 cut(s) 321
HapII CCGG 1 cut(s) 261
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 4 cut(s) 62, 219, 227, 246
HpaII CCGG 1 cut(s) 261
HphI GGTGA 2 cut(s) 37, 37
Hpy166II GTNNAC 2 cut(s) 223, 250
Hpy188I TCNGA 2 cut(s) 57, 67
Hpy8I GTNNAC 2 cut(s) 223, 250
Hpy99I CGWCG 1 cut(s) 227
HpyCH4IV ACGT 2 cut(s) 5, 233
HpyCH4V TGCA 1 cut(s) 306
HpySE526I ACGT 2 cut(s) 5, 233
Kzo9I GATC 1 cut(s) 181
LpnPI CCDG 8 cut(s) 8, 94, 126, 159, 201, 203, 228, 274
MaeI CTAG 1 cut(s) 93
MaeII ACGT 2 cut(s) 5, 233
MaeIII GTNAC 2 cut(s) 43, 76
MalI GATC 1 cut(s) 183
MboI GATC 1 cut(s) 181
MboII GAAGA 2 cut(s) 172, 218
MluCI AATT 2 cut(s) 287, 301
MlyI GAGTC 2 cut(s) 228, 255
MnlI CCTC 3 cut(s) 27, 176, 271
MspA1I CMGCKG 1 cut(s) 193
MspI CCGG 1 cut(s) 261
MspR9I CCNGG 2 cut(s) 216, 261
MvaI CCWGG 1 cut(s) 216
NciI CCSGG 1 cut(s) 261
NdeII GATC 1 cut(s) 181
NlaIV GGNNCC 1 cut(s) 144
NmuCI GTSAC 2 cut(s) 43, 76
PfeI GAWTC 2 cut(s) 62, 227
PkrI GCNGC 2 cut(s) 195, 323
PleI GAGTC 2 cut(s) 227, 254
PpsI GAGTC 2 cut(s) 227, 254
Ppu21I YACGTR 1 cut(s) 234
Psp6I CCWGG 1 cut(s) 214
PspGI CCWGG 1 cut(s) 214
PspN4I GGNNCC 1 cut(s) 144
PspPI GGNCC 1 cut(s) 319
SalI GTCGAC 1 cut(s) 221
SatI GCNGC 2 cut(s) 194, 322
Sau3AI GATC 1 cut(s) 181
Sau96I GGNCC 1 cut(s) 319
SchI GAGTC 2 cut(s) 228, 255
ScrFI CCNGG 2 cut(s) 216, 261
SetI ASST 6 cut(s) 8, 27, 111, 168, 236, 282
SnaBI TACGTA 1 cut(s) 234
Sse9I AATT 2 cut(s) 287, 301
SsiI CCGC 2 cut(s) 193, 322
SspMI CTAG 1 cut(s) 93
StyD4I CCNGG 2 cut(s) 214, 259
StyI CCWWGG 1 cut(s) 296
TaiI ACGT 2 cut(s) 8, 236
TaqI TCGA 1 cut(s) 222
TasI AATT 2 cut(s) 287, 301
TauI GCSGC 2 cut(s) 196, 324
TfiI GAWTC 2 cut(s) 62, 227
TscAI CASTG 1 cut(s) 275
TseFI GTSAC 2 cut(s) 43, 76
Tsp45I GTSAC 2 cut(s) 43, 76
TspRI CASTG 1 cut(s) 275
XmiI GTMKAC 2 cut(s) 222, 249
XspI CTAG 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.