AT5G37940

NADP-dependent alkenal double bond reductase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
15107124 .. 15108988
1865 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37940.1

Sequence Viewer

Length: 1062 bp
ATGGCGAACATCTGCATAGCGACGACGGCAACTAACAATCAGGTGATTCTCCGTGACTACGTGAGTGGATTCCCTAAACAATCCGACCTCTACATTGCCACAACCACCATTGACTTACGTGTACCTCCCGGATCCATGGCGGTTCTAGTCAAGAATCTCTACTTATCTTGCGATCCTCATAGCCGCACTCGCATGGGGAAGCCTGATCCCTCATCCCAGGCTTCCATGGCTCATGCTTTCACTATCGGCAAGCCAATCTCTGGGTTTGGAGTGGCTAAAGCAATAGATTCAGGGCACCCAAATTACAAAACAGGAGATTTACTTTGGGGAAGAGTTGGTTGGGAAGAGTATAGTGTTATTACTCCAACTCCTTCTTCACATTTCAAGATTCATCACACCGATGTTCCATTATCTTTCTACACTGGACTTCTTGGTATTCCGGGTCTCACTGCGTATGTTGGGTTTTACGAGATATGTTCTCCGAAGAAAGGAGAGACTGTATTTGTATCAGCTGCATCTGGCGCAGTAGGTCAACTTGTGGGACAGTTTGCGAAGATGGCGGGATGCTATGTCGTTGGAAGCGCTAGCAGTAAAGAGAAGGTTGATCTTCTCAAGACTAAGTTTGGGTATGATGACGCTTTCAATTATAAGGAAGAAAAGGATCTTAGTGCTGCCCTAAAGAGGTGTTTCCCAGAAGGAATAGACATATACTTTGAGAACGTGGGAGGCAAAATGTTAGACGCAGTGCTCCAAAACATGAGGACACATGGCCGAATCGCAGCGTGTGGAATGATTTCACAATACAATCTAAAGGAACCAGAAGGTTTACATAACACAGCCACCATTGTCCACAAACGCATCCGTGTTCAAGATTTTGCAGCTGTCGAATTTTTTGATAGATACTCCAAGTTTTTGGACTTCATACTTCCACACGTAAGAGAAGGGAAGATAACATATGTTGAGGATATAGCCCAAGGACTTGAGAATGGACCTTCTGCTTTGATCGGACTCTTCCACGGTAAGAACGTCGGGAAACAACTTGTCGAAGTTGCTCGCGAGTGA

Protein Analysis

353

Amino Acids

38.62

Weight (kDa)

8.1

Isoelectric Point (pI)

32.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 14 - 122 6.5e-19 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 175 - 308 8.4e-24 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 648
AccB1I GGYRCC 1 cut(s) 294
AccB7I CCANNNNNTGG 1 cut(s) 260
AccII CGCG 1 cut(s) 1056
AciI CCGC 3 cut(s) 140, 184, 560
AclWI GGATC 5 cut(s) 126, 139, 167, 200, 669
AcoI YGGCCR 1 cut(s) 769
AcsI RAATTY 1 cut(s) 887
AfaI GTAC 1 cut(s) 123
AfeI AGCGCT 1 cut(s) 583
AfiI CCNNNNNNNGG 3 cut(s) 260, 488, 681
AflIII ACRYGT 2 cut(s) 118, 931
AgsI TTSAA 3 cut(s) 385, 643, 869
AjnI CCWGG 1 cut(s) 216
AjuI GAANNNNNNNTTGG 4 cut(s) 322, 354, 358, 390
AluBI AGCT 2 cut(s) 512, 881
AluI AGCT 2 cut(s) 512, 881
Alw21I GWGCWC 1 cut(s) 750
Alw26I GTCTC 2 cut(s) 449, 488
AlwI GGATC 5 cut(s) 126, 139, 167, 200, 669
Aor51HI AGCGCT 1 cut(s) 583
AoxI GGCC 1 cut(s) 769
ApeKI GCWGC 4 cut(s) 512, 671, 779, 878
ApoI RAATTY 1 cut(s) 887
ArsI GACNNNNNNTTYG 2 cut(s) 695, 727
Asp700I GAANNNNTTC 1 cut(s) 793
AspLEI GCGC 2 cut(s) 524, 584
AspS9I GGNCC 1 cut(s) 989
AsuC2I CCSGG 2 cut(s) 129, 441
AsuHPI GGTGA 1 cut(s) 55
AsuNHI GCTAGC 1 cut(s) 584
AvaII GGWCC 1 cut(s) 989
BaeGI GKGCMC 1 cut(s) 297
BamHI GGATCC 1 cut(s) 131
BanI GGYRCC 1 cut(s) 294
Bbv12I GWGCWC 1 cut(s) 750
BbvI GCAGC 4 cut(s) 499, 658, 791, 890
BccI CCATC 1 cut(s) 550
BceAI ACGGC 1 cut(s) 42
BciT130I CCWGG 1 cut(s) 218
BcnI CCSGG 2 cut(s) 129, 441
BcoDI GTCTC 2 cut(s) 449, 488
BfaI CTAG 2 cut(s) 146, 585
BfoI RGCGCY 1 cut(s) 585
BisI GCNGC 5 cut(s) 184, 513, 672, 780, 879
BlsI GCNGC 5 cut(s) 185, 514, 673, 781, 880
Bme1390I CCNGG 3 cut(s) 129, 218, 441
Bme18I GGWCC 1 cut(s) 989
BmgT120I GGNCC 1 cut(s) 989
BmiI GGNNCC 3 cut(s) 133, 296, 816
BmrFI CCNGG 3 cut(s) 129, 218, 441
BmsI GCATC 3 cut(s) 524, 554, 867
BmtI GCTAGC 1 cut(s) 588
BpuEI CTTGAG 2 cut(s) 596, 1001
BpuMI CCSGG 2 cut(s) 129, 441
BsaAI YACGTR 3 cut(s) 61, 119, 934
BsaI GGTCTC 1 cut(s) 449
BsaJI CCNNGG 5 cut(s) 135, 216, 225, 973, 1015
BsaXI ACNNNNNCTCC 4 cut(s) 352, 382, 483, 513
Bsc4I CCNNNNNNNGG 3 cut(s) 260, 488, 681
Bse1I ACTGG 1 cut(s) 427
Bse3DI GCAATG 1 cut(s) 93
BseBI CCWGG 1 cut(s) 218
BseDI CCNNGG 5 cut(s) 135, 216, 225, 973, 1015
BseGI GGATG 3 cut(s) 212, 569, 858
BseLI CCNNNNNNNGG 3 cut(s) 260, 488, 681
BseMI GCAATG 1 cut(s) 93
BseNI ACTGG 1 cut(s) 427
BseSI GKGCMC 1 cut(s) 297
BseXI GCAGC 4 cut(s) 499, 658, 791, 890
Bsh1236I CGCG 1 cut(s) 1056
BshFI GGCC 1 cut(s) 771
BshNI GGYRCC 1 cut(s) 294
BsiHKAI GWGCWC 1 cut(s) 750
BsiSI CCGG 2 cut(s) 129, 440
BslFI GGGAC 1 cut(s) 555
BslI CCNNNNNNNGG 3 cut(s) 260, 488, 681
BsmAI GTCTC 2 cut(s) 449, 488
BsmFI GGGAC 1 cut(s) 555
BsnI GGCC 1 cut(s) 771
Bso31I GGTCTC 1 cut(s) 449
Bsp1286I GDGCHC 2 cut(s) 297, 750
Bsp143I GATC 6 cut(s) 131, 172, 205, 604, 661, 1002
Bsp19I CCATGG 2 cut(s) 135, 225
Bsp68I TCGCGA 1 cut(s) 1056
BspACI CCGC 3 cut(s) 140, 184, 560
BspANI GGCC 1 cut(s) 771
BspFNI CGCG 1 cut(s) 1056
BspLI GGNNCC 3 cut(s) 133, 296, 816
BspOI GCTAGC 1 cut(s) 588
BspPI GGATC 5 cut(s) 126, 139, 167, 200, 669
BspT107I GGYRCC 1 cut(s) 294
BspTNI GGTCTC 1 cut(s) 449
BsrDI GCAATG 1 cut(s) 93
BsrI ACTGG 1 cut(s) 427
BssECI CCNNGG 5 cut(s) 135, 216, 225, 973, 1015
BssMI GATC 6 cut(s) 131, 172, 205, 604, 661, 1002
BssT1I CCWWGG 3 cut(s) 135, 225, 973
Bst2UI CCWGG 1 cut(s) 218
Bst4CI ACNGT 3 cut(s) 499, 546, 1019
Bst6I CTCTTC 3 cut(s) 325, 339, 1016
BstBAI YACGTR 3 cut(s) 61, 119, 934
BstC8I GCNNGC 3 cut(s) 251, 586, 1054
BstDEI CTNAG 2 cut(s) 618, 665
BstDSI CCRYGG 3 cut(s) 135, 225, 1015
BstF5I GGATG 3 cut(s) 212, 569, 858
BstFNI CGCG 1 cut(s) 1056
BstH2I RGCGCY 1 cut(s) 585
BstHHI GCGC 2 cut(s) 524, 584
BstKTI GATC 6 cut(s) 134, 175, 208, 607, 664, 1005
BstMAI GTCTC 2 cut(s) 449, 488
BstMBI GATC 6 cut(s) 131, 172, 205, 604, 661, 1002
BstMWI GCNNNNNNNGC 5 cut(s) 26, 189, 227, 521, 557
BstNI CCWGG 1 cut(s) 218
BstSCI CCNGG 3 cut(s) 127, 216, 439
BstSLI GKGCMC 1 cut(s) 297
BstUI CGCG 1 cut(s) 1056
BstV1I GCAGC 4 cut(s) 499, 658, 791, 890
BstX2I RGATCY 2 cut(s) 131, 661
BstXI CCANNNNNNTGG 1 cut(s) 913
BstYI RGATCY 2 cut(s) 131, 661
BsuRI GGCC 1 cut(s) 771
BtgI CCRYGG 3 cut(s) 135, 225, 1015
BtsCI GGATG 3 cut(s) 212, 569, 858
BtsI GCAGTG 2 cut(s) 447, 750
BtsIMutI CAGTG 3 cut(s) 420, 447, 750
BtuMI TCGCGA 1 cut(s) 1056
Cac8I GCNNGC 3 cut(s) 251, 586, 1054
CfoI GCGC 2 cut(s) 524, 584
Cfr13I GGNCC 1 cut(s) 989
CseI GACGC 2 cut(s) 644, 749
Csp6I GTAC 1 cut(s) 122
CviAII CATG 6 cut(s) 136, 193, 226, 233, 757, 767
CviQI GTAC 1 cut(s) 122
DdeI CTNAG 2 cut(s) 618, 665
DpnI GATC 6 cut(s) 133, 174, 207, 606, 663, 1004
DpnII GATC 6 cut(s) 131, 172, 205, 604, 661, 1002
EaeI YGGCCR 1 cut(s) 769
Eam1104I CTCTTC 3 cut(s) 325, 339, 1016
EarI CTCTTC 3 cut(s) 325, 339, 1016
Eco130I CCWWGG 3 cut(s) 135, 225, 973
Eco31I GGTCTC 1 cut(s) 449
Eco47I GGWCC 1 cut(s) 989
Eco47III AGCGCT 1 cut(s) 583
EcoRII CCWGG 1 cut(s) 216
EcoT14I CCWWGG 3 cut(s) 135, 225, 973
ErhI CCWWGG 3 cut(s) 135, 225, 973
FaeI CATG 6 cut(s) 139, 196, 229, 236, 760, 770
FaqI GGGAC 1 cut(s) 555
FatI CATG 6 cut(s) 135, 192, 225, 232, 756, 766
FauI CCCGC 1 cut(s) 553
FauNDI CATATG 1 cut(s) 955
Fnu4HI GCNGC 5 cut(s) 184, 513, 672, 780, 879
FokI GGATG 3 cut(s) 199, 576, 845
Fsp4HI GCNGC 5 cut(s) 184, 513, 672, 780, 879
FspBI CTAG 2 cut(s) 146, 585
GlaI GCGC 2 cut(s) 523, 583
GluI GCNGC 5 cut(s) 184, 513, 672, 780, 879
HaeII RGCGCY 1 cut(s) 585
HaeIII GGCC 1 cut(s) 771
HapII CCGG 2 cut(s) 129, 440
HgaI GACGC 2 cut(s) 644, 749
HhaI GCGC 2 cut(s) 524, 584
Hin1II CATG 6 cut(s) 139, 196, 229, 236, 760, 770
Hin6I GCGC 2 cut(s) 522, 582
HinP1I GCGC 2 cut(s) 522, 582
HincII GTYRAC 1 cut(s) 533
HindII GTYRAC 1 cut(s) 533
HinfI GANTC 7 cut(s) 46, 69, 154, 287, 388, 774, 1008
HpaII CCGG 2 cut(s) 129, 440
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 4 cut(s) 122, 533, 827, 850
Hpy188I TCNGA 3 cut(s) 85, 483, 1007
Hpy188III TCNNGA 6 cut(s) 151, 385, 613, 869, 1030, 1055
Hpy8I GTNNAC 4 cut(s) 122, 533, 827, 850
Hpy99I CGWCG 3 cut(s) 25, 28, 1031
HpyAV CCTTC 6 cut(s) 381, 592, 689, 815, 935, 1002
HpyCH4III ACNGT 3 cut(s) 499, 546, 1019
HpyCH4IV ACGT 5 cut(s) 60, 118, 720, 933, 1026
HpyCH4V TGCA 3 cut(s) 15, 515, 878
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 189, 227, 521, 557
HpyF3I CTNAG 2 cut(s) 618, 665
HpySE526I ACGT 5 cut(s) 60, 118, 720, 933, 1026
Hsp92II CATG 6 cut(s) 139, 196, 229, 236, 760, 770
HspAI GCGC 2 cut(s) 522, 582
Kzo9I GATC 6 cut(s) 131, 172, 205, 604, 661, 1002
LmnI GCTCC 1 cut(s) 753
Lsp1109I GCAGC 4 cut(s) 499, 658, 791, 890
LweI GCATC 3 cut(s) 524, 554, 867
MaeI CTAG 2 cut(s) 146, 585
MaeII ACGT 5 cut(s) 60, 118, 720, 933, 1026
MaeIII GTNAC 1 cut(s) 53
MalI GATC 6 cut(s) 133, 174, 207, 606, 663, 1004
MboI GATC 6 cut(s) 131, 172, 205, 604, 661, 1002
MboII GAAGA 9 cut(s) 342, 356, 366, 496, 565, 599, 665, 958, 1003
MflI RGATCY 2 cut(s) 131, 661
MhlI GDGCHC 2 cut(s) 297, 750
MluCI AATT 3 cut(s) 301, 643, 887
MlyI GAGTC 1 cut(s) 1002
MmeI TCCRAC 3 cut(s) 108, 389, 556
MnlI CCTC 8 cut(s) 98, 135, 186, 220, 675, 719, 753, 955
MroXI GAANNNNTTC 1 cut(s) 793
MslI CAYNNNNRTG 2 cut(s) 191, 399
MspA1I CMGCKG 2 cut(s) 512, 881
MspI CCGG 2 cut(s) 129, 440
MspR9I CCNGG 3 cut(s) 129, 218, 441
MvaI CCWGG 1 cut(s) 218
MvnI CGCG 1 cut(s) 1056
MwoI GCNNNNNNNGC 5 cut(s) 26, 189, 227, 521, 557
NciI CCSGG 2 cut(s) 129, 441
NcoI CCATGG 2 cut(s) 135, 225
NdeI CATATG 1 cut(s) 955
NdeII GATC 6 cut(s) 131, 172, 205, 604, 661, 1002
NheI GCTAGC 1 cut(s) 584
NlaIII CATG 6 cut(s) 139, 196, 229, 236, 760, 770
NlaIV GGNNCC 3 cut(s) 133, 296, 816
NmuCI GTSAC 1 cut(s) 53
NruI TCGCGA 1 cut(s) 1056
PcsI WCGNNNNNNNCGW 1 cut(s) 1023
PdmI GAANNNNTTC 1 cut(s) 793
PfeI GAWTC 6 cut(s) 46, 69, 154, 287, 388, 774
PflMI CCANNNNNTGG 1 cut(s) 260
PfoI TCCNGGA 1 cut(s) 127
PkrI GCNGC 5 cut(s) 185, 514, 673, 781, 880
PleI GAGTC 1 cut(s) 1002
PpsI GAGTC 1 cut(s) 1002
Ppu21I YACGTR 3 cut(s) 61, 119, 934
PsiI TTATAA 1 cut(s) 648
Psp6I CCWGG 1 cut(s) 216
PspGI CCWGG 1 cut(s) 216
PspN4I GGNNCC 3 cut(s) 133, 296, 816
PspPI GGNCC 1 cut(s) 989
PsuI RGATCY 2 cut(s) 131, 661
PvuII CAGCTG 2 cut(s) 512, 881
RruI TCGCGA 1 cut(s) 1056
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
RseI CAYNNNNRTG 2 cut(s) 191, 399
SatI GCNGC 5 cut(s) 184, 513, 672, 780, 879
Sau3AI GATC 6 cut(s) 131, 172, 205, 604, 661, 1002
Sau96I GGNCC 1 cut(s) 989
SchI GAGTC 1 cut(s) 1002
ScrFI CCNGG 3 cut(s) 129, 218, 441
SduI GDGCHC 2 cut(s) 297, 750
SfaNI GCATC 3 cut(s) 524, 554, 867
SinI GGWCC 1 cut(s) 989
SmiMI CAYNNNNRTG 2 cut(s) 191, 399
SmlI CTYRAG 2 cut(s) 611, 980
SmoI CTYRAG 2 cut(s) 611, 980
Sse9I AATT 3 cut(s) 301, 643, 887
SsiI CCGC 3 cut(s) 140, 184, 560
SspMI CTAG 2 cut(s) 146, 585
StyD4I CCNGG 3 cut(s) 127, 216, 439
StyI CCWWGG 3 cut(s) 135, 225, 973
TaaI ACNGT 3 cut(s) 499, 546, 1019
TaiI ACGT 5 cut(s) 63, 121, 723, 936, 1029
TaqI TCGA 2 cut(s) 885, 1044
TasI AATT 3 cut(s) 301, 643, 887
TauI GCSGC 1 cut(s) 186
TfiI GAWTC 6 cut(s) 46, 69, 154, 287, 388, 774
TscAI CASTG 3 cut(s) 427, 454, 750
TseFI GTSAC 1 cut(s) 53
TseI GCWGC 4 cut(s) 512, 671, 779, 878
Tsp45I GTSAC 1 cut(s) 53
TspDTI ATGAA 2 cut(s) 380, 910
TspGWI ACGGA 2 cut(s) 41, 851
TspRI CASTG 3 cut(s) 427, 454, 750
Van91I CCANNNNNTGG 1 cut(s) 260
VpaK11BI GGWCC 1 cut(s) 989
XapI RAATTY 1 cut(s) 887
XmnI GAANNNNTTC 1 cut(s) 793
XspI CTAG 2 cut(s) 146, 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.