Prupe.1G543700_v2.0.a1

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000431
Physical Location & Seq
Forward (+)
44434305 .. 44436369
2065 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G543700.1

Sequence Viewer

Length: 1071 bp
ATGGCAAAATTGGTGAGCAACAAGCAGGTGATTTTGAGAGACTACGTCTCTGGCAGGTATCCGACCGAGTCGGACATGTATGTGAAGACAAGTAACATAAGCTTGAAGGTTCCACATGTACAAGGAGGACAAGGAGAAGGGCCTTGTAATAATATTGTGTTGGTCAAGAACCTCTACTTGTCCTGCGATCCAATGATGCGATTTCTCATCATGGATACTTCTCATTACAAAATGACCAAATACGAATATTGTACCCCTGGCTCTCCAATTTGTGGGTATGGTGTGGCCAAAGTTTTGGACTCCAGTAATCCAGAATTTAAAGAAGGTGACTTGGTATGGGGGCTAACCAGATGGGAAGAGTATAGCTTCATCACAAACACTAAAAGCCTCATCAAAATCCAGCACACTGATGTACCCCTTTCCTACTATACTGGAATTCTGGGTATGCCCGGTAAGAGTGCTTATGCTGGTTTCTTTGAAGTATGCACTCCGAAGAAAGGGGAATACGTGTTCGTGTCTGCAGCATCCGGAGCAGTTGGGCAGCTTGTGGGACAATTTGCAAAATTGGCTGGTTGTTATGTTGTTGGAAGTGCTGGAAGTAAAGAAAAGGTTGACCTGCTGAAGAATAAGTTGGGGTTCGATGAGGCCTTCAACTACAAGGAGGAGCATGATTTAAACGCAGCTCTGAAAAGGTATTTTCCTCAAGGCATTGATGTCTACTTTGAGAATGTTGGTGGGGATATGCTGGAGGCTGTGCTGCTCAACATGAGAGAACACGGTCGCATTACTATTTGCGGAATGATTTCACAATACAATCTTCCCGAGCCTCAAGGAATTAAAAACGTGATGCAAATTGCATTTAAGAGACTGCATATACACGGATTTACACATCGCGATTACGATCACATCGTGCCCAAATACTTAGACTTTGTGCTGCCTTACATCCGCCAAGGCAAATTAGTGTATGTGGAAGACATAGTTGAAGGCCTTGAGAATGGTCCAGCAGCCCTGGTTGGGCTTTTCAATGGCCGCAACTTTGGCAAACAAGTCATTGCACTTGCTCACCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

357

Amino Acids

39.78

Weight (kDa)

7.6

Isoelectric Point (pI)

30.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 16
Acc36I ACCTGC 3 cut(s) 16, 45, 624
AccB7I CCANNNNNTGG 1 cut(s) 272
AccI GTMKAC 1 cut(s) 717
AccII CGCG 1 cut(s) 894
AccIII TCCGGA 1 cut(s) 527
AciI CCGC 3 cut(s) 795, 946, 1030
AclWI GGATC 1 cut(s) 182
AcoI YGGCCR 2 cut(s) 285, 1027
AcsI RAATTY 2 cut(s) 314, 435
AcuI CTGAAG 1 cut(s) 641
AdeI CACNNNGTG 1 cut(s) 910
AfaI GTAC 3 cut(s) 120, 253, 414
AfiI CCNNNNNNNGG 3 cut(s) 272, 497, 1014
AflIII ACRYGT 3 cut(s) 75, 115, 507
AgsI TTSAA 5 cut(s) 106, 479, 652, 983, 1024
AjnI CCWGG 2 cut(s) 256, 1008
AjuI GAANNNNNNNTTGG 2 cut(s) 614, 646
AloI GAACNNNNNNTCC 2 cut(s) 494, 526
AluBI AGCT 4 cut(s) 102, 366, 544, 683
AluI AGCT 4 cut(s) 102, 366, 544, 683
Alw26I GTCTC 3 cut(s) 33, 52, 859
AlwI GGATC 1 cut(s) 182
Ama87I CYCGRG 1 cut(s) 821
Aor13HI TCCGGA 1 cut(s) 527
AoxI GGCC 5 cut(s) 140, 285, 645, 985, 1027
ApeKI GCWGC 6 cut(s) 521, 541, 680, 757, 934, 1004
ApoI RAATTY 2 cut(s) 314, 435
Asp700I GAANNNNTTC 1 cut(s) 802
AspS9I GGNCC 2 cut(s) 140, 998
AsuC2I CCSGG 1 cut(s) 450
AsuHPI GGTGA 4 cut(s) 25, 40, 338, 1055
AvaI CYCGRG 1 cut(s) 821
AvaII GGWCC 1 cut(s) 998
BaeGI GKGCMC 1 cut(s) 915
BaeI ACNNNNGTAYC 2 cut(s) 396, 429
BalI TGGCCA 1 cut(s) 287
BbsI GAAGAC 2 cut(s) 92, 978
BbvI GCAGC 6 cut(s) 533, 553, 692, 744, 921, 1016
BccI CCATC 1 cut(s) 345
BciT130I CCWGG 2 cut(s) 258, 1010
BciVI GTATCC 2 cut(s) 69, 208
BcnI CCSGG 1 cut(s) 450
BcoDI GTCTC 3 cut(s) 33, 52, 859
BfmI CTRYAG 1 cut(s) 519
BfuAI ACCTGC 3 cut(s) 16, 45, 624
BfuI GTATCC 2 cut(s) 69, 208
BisI GCNGC 7 cut(s) 522, 542, 681, 758, 935, 1005, 1030
BlsI GCNGC 7 cut(s) 523, 543, 682, 759, 936, 1006, 1031
Bme1390I CCNGG 3 cut(s) 258, 450, 1010
Bme18I GGWCC 1 cut(s) 998
BmeT110I CYCGRG 1 cut(s) 821
BmgT120I GGNCC 2 cut(s) 140, 998
BmiI GGNNCC 1 cut(s) 111
BmrFI CCNGG 3 cut(s) 258, 450, 1010
BmsI GCATC 3 cut(s) 186, 533, 837
BpiI GAAGAC 2 cut(s) 92, 978
BpmI CTGGAG 2 cut(s) 286, 767
BpuEI CTTGAG 3 cut(s) 687, 813, 1010
BpuMI CCSGG 1 cut(s) 450
BsaAI YACGTR 1 cut(s) 508
BsaBI GATNNNNATC 1 cut(s) 900
BsaJI CCNNGG 3 cut(s) 256, 949, 1008
BsaWI WCCGGW 1 cut(s) 527
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 497, 1014
Bse1I ACTGG 2 cut(s) 303, 436
Bse3DI GCAATG 1 cut(s) 1050
Bse8I GATNNNNATC 1 cut(s) 900
BseAI TCCGGA 1 cut(s) 527
BseBI CCWGG 2 cut(s) 258, 1010
BseDI CCNNGG 3 cut(s) 256, 949, 1008
BseGI GGATG 2 cut(s) 524, 942
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 3 cut(s) 272, 497, 1014
BseMI GCAATG 1 cut(s) 1050
BseNI ACTGG 2 cut(s) 303, 436
BseRI GAGGAG 1 cut(s) 677
BseSI GKGCMC 1 cut(s) 915
BseXI GCAGC 6 cut(s) 533, 553, 692, 744, 921, 1016
Bsh1236I CGCG 1 cut(s) 894
Bsh1285I CGRYCG 2 cut(s) 66, 781
BshFI GGCC 5 cut(s) 142, 287, 647, 987, 1029
BsiEI CGRYCG 2 cut(s) 66, 781
BsiHKCI CYCGRG 1 cut(s) 821
BsiSI CCGG 2 cut(s) 450, 528
BslFI GGGAC 1 cut(s) 564
BslI CCNNNNNNNGG 3 cut(s) 272, 497, 1014
BsmAI GTCTC 3 cut(s) 33, 52, 859
BsmBI CGTCTC 1 cut(s) 52
BsmFI GGGAC 1 cut(s) 564
BsnI GGCC 5 cut(s) 142, 287, 647, 987, 1029
BsoBI CYCGRG 1 cut(s) 821
Bsp1286I GDGCHC 1 cut(s) 915
Bsp13I TCCGGA 1 cut(s) 527
Bsp1407I TGTACA 1 cut(s) 118
Bsp143I GATC 2 cut(s) 187, 901
Bsp68I TCGCGA 1 cut(s) 894
BspACI CCGC 3 cut(s) 795, 946, 1030
BspANI GGCC 5 cut(s) 142, 287, 647, 987, 1029
BspEI TCCGGA 1 cut(s) 527
BspFNI CGCG 1 cut(s) 894
BspLI GGNNCC 1 cut(s) 111
BspMAI CTGCAG 1 cut(s) 523
BspMI ACCTGC 3 cut(s) 16, 45, 624
BspPI GGATC 1 cut(s) 182
BsrDI GCAATG 1 cut(s) 1050
BsrGI TGTACA 1 cut(s) 118
BsrI ACTGG 2 cut(s) 303, 436
BssECI CCNNGG 3 cut(s) 256, 949, 1008
BssMI GATC 2 cut(s) 187, 901
BssT1I CCWWGG 1 cut(s) 949
Bst2UI CCWGG 2 cut(s) 258, 1010
Bst4CI ACNGT 1 cut(s) 779
Bst6I CTCTTC 1 cut(s) 351
BstAUI TGTACA 1 cut(s) 118
BstBAI YACGTR 1 cut(s) 508
BstDEI CTNAG 1 cut(s) 922
BstF5I GGATG 2 cut(s) 524, 942
BstFNI CGCG 1 cut(s) 894
BstKTI GATC 2 cut(s) 190, 904
BstMAI GTCTC 3 cut(s) 33, 52, 859
BstMBI GATC 2 cut(s) 187, 901
BstMCI CGRYCG 2 cut(s) 66, 781
BstMWI GCNNNNNNNGC 3 cut(s) 530, 566, 1038
BstNI CCWGG 2 cut(s) 258, 1010
BstNSI RCATGY 2 cut(s) 79, 119
BstSCI CCNGG 3 cut(s) 256, 448, 1008
BstSFI CTRYAG 1 cut(s) 519
BstSLI GKGCMC 1 cut(s) 915
BstUI CGCG 1 cut(s) 894
BstV1I GCAGC 6 cut(s) 533, 553, 692, 744, 921, 1016
BstV2I GAAGAC 2 cut(s) 92, 978
BstXI CCANNNNNNTGG 1 cut(s) 295
BsuI GTATCC 2 cut(s) 69, 208
BsuRI GGCC 5 cut(s) 142, 287, 647, 987, 1029
BtgZI GCGATG 1 cut(s) 875
BtsCI GGATG 2 cut(s) 524, 942
BtsIMutI CAGTG 1 cut(s) 405
BtuMI TCGCGA 1 cut(s) 894
BveI ACCTGC 3 cut(s) 16, 45, 624
Cfr13I GGNCC 2 cut(s) 140, 998
Csp6I GTAC 3 cut(s) 119, 252, 413
CviAII CATG 5 cut(s) 76, 116, 211, 668, 766
CviQI GTAC 3 cut(s) 119, 252, 413
DdeI CTNAG 1 cut(s) 922
DpnI GATC 2 cut(s) 189, 903
DpnII GATC 2 cut(s) 187, 901
DraI TTTAAA 2 cut(s) 319, 675
DraIII CACNNNGTG 1 cut(s) 910
EaeI YGGCCR 2 cut(s) 285, 1027
Eam1104I CTCTTC 1 cut(s) 351
EarI CTCTTC 1 cut(s) 351
EciI GGCGGA 1 cut(s) 935
Eco130I CCWWGG 1 cut(s) 949
Eco147I AGGCCT 2 cut(s) 647, 987
Eco47I GGWCC 1 cut(s) 998
Eco57I CTGAAG 1 cut(s) 641
Eco88I CYCGRG 1 cut(s) 821
EcoO109I RGGNCCY 1 cut(s) 140
EcoRI GAATTC 1 cut(s) 435
EcoRII CCWGG 2 cut(s) 256, 1008
EcoT14I CCWWGG 1 cut(s) 949
ErhI CCWWGG 1 cut(s) 949
Esp3I CGTCTC 1 cut(s) 52
FaeI CATG 5 cut(s) 79, 119, 214, 671, 769
FaqI GGGAC 1 cut(s) 564
FatI CATG 5 cut(s) 75, 115, 210, 667, 765
FblI GTMKAC 1 cut(s) 717
Fnu4HI GCNGC 7 cut(s) 522, 542, 681, 758, 935, 1005, 1030
FokI GGATG 2 cut(s) 511, 929
Fsp4HI GCNGC 7 cut(s) 522, 542, 681, 758, 935, 1005, 1030
GluI GCNGC 7 cut(s) 522, 542, 681, 758, 935, 1005, 1030
GsuI CTGGAG 2 cut(s) 286, 767
HaeIII GGCC 5 cut(s) 142, 287, 647, 987, 1029
HapII CCGG 2 cut(s) 450, 528
Hin1II CATG 5 cut(s) 79, 119, 214, 671, 769
HincII GTYRAC 1 cut(s) 613
HindII GTYRAC 1 cut(s) 613
HindIII AAGCTT 1 cut(s) 100
HinfI GANTC 2 cut(s) 68, 299
HpaII CCGG 2 cut(s) 450, 528
HphI GGTGA 4 cut(s) 25, 40, 338, 1055
Hpy166II GTNNAC 2 cut(s) 613, 718
Hpy188I TCNGA 4 cut(s) 63, 73, 492, 687
Hpy188III TCNNGA 5 cut(s) 166, 311, 528, 821, 893
Hpy8I GTNNAC 2 cut(s) 613, 718
HpyAV CCTTC 5 cut(s) 100, 131, 317, 658, 977
HpyCH4III ACNGT 1 cut(s) 779
HpyCH4IV ACGT 3 cut(s) 45, 507, 843
HpyCH4V TGCA 7 cut(s) 486, 521, 560, 850, 857, 871, 1055
HpyF10VI GCNNNNNNNGC 3 cut(s) 530, 566, 1038
HpyF3I CTNAG 1 cut(s) 922
HpySE526I ACGT 3 cut(s) 45, 507, 843
Hsp92II CATG 5 cut(s) 79, 119, 214, 671, 769
Kpn2I TCCGGA 1 cut(s) 527
Kzo9I GATC 2 cut(s) 187, 901
LmnI GCTCC 2 cut(s) 530, 664
Lsp1109I GCAGC 6 cut(s) 533, 553, 692, 744, 921, 1016
LweI GCATC 3 cut(s) 186, 533, 837
MaeII ACGT 3 cut(s) 45, 507, 843
MaeIII GTNAC 2 cut(s) 92, 326
MalI GATC 2 cut(s) 189, 903
MboI GATC 2 cut(s) 187, 901
MboII GAAGA 6 cut(s) 97, 368, 505, 634, 809, 983
MhlI GDGCHC 1 cut(s) 915
MlsI TGGCCA 1 cut(s) 287
MluCI AATT 9 cut(s) 8, 267, 314, 435, 554, 563, 834, 852, 956
MluNI TGGCCA 1 cut(s) 287
MlyI GAGTC 2 cut(s) 77, 293
MmeI TCCRAC 3 cut(s) 51, 86, 565
MnlI CCTC 8 cut(s) 119, 182, 398, 637, 655, 711, 742, 837
Mox20I TGGCCA 1 cut(s) 287
MroI TCCGGA 1 cut(s) 527
MroXI GAANNNNTTC 1 cut(s) 802
MscI TGGCCA 1 cut(s) 287
MseI TTAA 4 cut(s) 318, 674, 837, 861
MslI CAYNNNNRTG 2 cut(s) 80, 408
Msp20I TGGCCA 1 cut(s) 287
MspI CCGG 2 cut(s) 450, 528
MspR9I CCNGG 3 cut(s) 258, 450, 1010
MvaI CCWGG 2 cut(s) 258, 1010
MvnI CGCG 1 cut(s) 894
MwoI GCNNNNNNNGC 3 cut(s) 530, 566, 1038
NciI CCSGG 1 cut(s) 450
NdeII GATC 2 cut(s) 187, 901
NlaIII CATG 5 cut(s) 79, 119, 214, 671, 769
NlaIV GGNNCC 1 cut(s) 111
NmuCI GTSAC 1 cut(s) 326
NruI TCGCGA 1 cut(s) 894
NspI RCATGY 2 cut(s) 79, 119
PaqCI CACCTGC 1 cut(s) 16
PceI AGGCCT 2 cut(s) 647, 987
PciI ACATGT 2 cut(s) 75, 115
PcsI WCGNNNNNNNCGW 1 cut(s) 906
PdmI GAANNNNTTC 1 cut(s) 802
PflFI GACNNNGTC 2 cut(s) 44, 67
PflMI CCANNNNNTGG 1 cut(s) 272
PkrI GCNGC 7 cut(s) 523, 543, 682, 759, 936, 1006, 1031
PleI GAGTC 2 cut(s) 76, 293
PpsI GAGTC 2 cut(s) 76, 293
Ppu21I YACGTR 1 cut(s) 508
PscI ACATGT 2 cut(s) 75, 115
Psp6I CCWGG 2 cut(s) 256, 1008
PspGI CCWGG 2 cut(s) 256, 1008
PspN4I GGNNCC 1 cut(s) 111
PspPI GGNCC 2 cut(s) 140, 998
PstI CTGCAG 1 cut(s) 523
PsyI GACNNNGTC 2 cut(s) 44, 67
RruI TCGCGA 1 cut(s) 894
RsaI GTAC 3 cut(s) 120, 253, 414
RsaNI GTAC 3 cut(s) 119, 252, 413
RseI CAYNNNNRTG 2 cut(s) 80, 408
SaqAI TTAA 4 cut(s) 318, 674, 837, 861
SatI GCNGC 7 cut(s) 522, 542, 681, 758, 935, 1005, 1030
Sau3AI GATC 2 cut(s) 187, 901
Sau96I GGNCC 2 cut(s) 140, 998
SchI GAGTC 2 cut(s) 77, 293
ScrFI CCNGG 3 cut(s) 258, 450, 1010
SduI GDGCHC 1 cut(s) 915
SfaNI GCATC 3 cut(s) 186, 533, 837
SfcI CTRYAG 1 cut(s) 519
SinI GGWCC 1 cut(s) 998
SmiMI CAYNNNNRTG 2 cut(s) 80, 408
SmlI CTYRAG 3 cut(s) 702, 828, 989
SmoI CTYRAG 3 cut(s) 702, 828, 989
Sse9I AATT 9 cut(s) 8, 267, 314, 435, 554, 563, 834, 852, 956
SseBI AGGCCT 2 cut(s) 647, 987
SsiI CCGC 3 cut(s) 795, 946, 1030
SspI AATATT 2 cut(s) 154, 248
StuI AGGCCT 2 cut(s) 647, 987
StyD4I CCNGG 3 cut(s) 256, 448, 1008
StyI CCWWGG 1 cut(s) 949
TaaI ACNGT 1 cut(s) 779
TaiI ACGT 3 cut(s) 48, 510, 846
TaqI TCGA 1 cut(s) 639
TaqII GACCGA 1 cut(s) 80
TasI AATT 9 cut(s) 8, 267, 314, 435, 554, 563, 834, 852, 956
TatI WGTACW 1 cut(s) 118
TauI GCSGC 1 cut(s) 1032
Tru1I TTAA 4 cut(s) 318, 674, 837, 861
Tru9I TTAA 4 cut(s) 318, 674, 837, 861
TscAI CASTG 1 cut(s) 412
TseFI GTSAC 1 cut(s) 326
TseI GCWGC 6 cut(s) 521, 541, 680, 757, 934, 1004
Tsp45I GTSAC 1 cut(s) 326
TspDTI ATGAA 1 cut(s) 358
TspGWI ACGGA 1 cut(s) 894
TspRI CASTG 1 cut(s) 412
Tth111I GACNNNGTC 2 cut(s) 44, 67
Van91I CCANNNNNTGG 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 998
XapI RAATTY 2 cut(s) 314, 435
XceI RCATGY 2 cut(s) 79, 119
XmiI GTMKAC 1 cut(s) 717
XmnI GAANNNNTTC 1 cut(s) 802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.