Rmu_sc0012119.1_g000008

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012119.1
OG0000431
Physical Location & Seq
Reverse (-)
19970 .. 21104
1135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012119.1_g000008.1.cds

Sequence Viewer

Length: 774 bp
atgatgcagccaattcgtgggtatggtgtgtctcaagttgtggactcgagtcatccagagtataaacaaggtgatttggtgtgggggttaaccacatgggaagagtacagcctcatcacagatatcgtccctgaaacctcactcgttaaaatacaccacactgatgtccctctttcttactatactggacttcttggcatggctggtaagactgcttatgctggattctttgaagtatgtcctcctaagaaaggagacaaggtgttggtctctgcagcatctggtgcagttggtcagcttctcggacaattcgctaagttggctggctgttatgttgttggatctgccggatctaaagaaaaggttgatctactgaagaacaagttggggtactttcctgaaggaattgacgtctactttgagcatgtgggtgggaaattgtttgacgcagtgctgctcaacatgaaagaacacggtcgcattgctgtgtgcggaatgatttcacaatacaaccttcccgagcctgagccactcaaaaacctgttccagattgcgttgaagcggctcaatatacatggatttacgcatcgcgattacgatcacatagtacccaagtactatgagtttgtgctgccttacatccgggaaggtaaaatagtgtatgtggaagacatagttgaagggcttgagaatggtccagcagcactggttggactctttactggtcgcaactttgggaagcaagtagttgcagttgcaccacctcaaccttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

257

Amino Acids

28.29

Weight (kDa)

6.24

Isoelectric Point (pI)

24.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 414
AccB7I CCANNNNNTGG 1 cut(s) 17
AccI GTMKAC 1 cut(s) 414
AccII CGCG 1 cut(s) 591
AciI CCGC 2 cut(s) 492, 562
AclWI GGATC 2 cut(s) 349, 358
AcuI CTGAAG 2 cut(s) 395, 420
AcyI GRCGYC 1 cut(s) 411
AfaI GTAC 4 cut(s) 107, 392, 609, 617
AfiI CCNNNNNNNGG 2 cut(s) 17, 251
AgsI TTSAA 3 cut(s) 233, 559, 680
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
AluBI AGCT 1 cut(s) 298
AluI AGCT 1 cut(s) 298
Alw26I GTCTC 3 cut(s) 36, 249, 274
AlwI GGATC 2 cut(s) 349, 358
AlwNI CAGNNNCTG 1 cut(s) 281
Ama87I CYCGRG 2 cut(s) 46, 518
ApeKI GCWGC 5 cut(s) 7, 275, 454, 631, 701
ArsI GACNNNNNNTTYG 2 cut(s) 401, 433
Asp700I GAANNNNTTC 1 cut(s) 499
AspS9I GGNCC 1 cut(s) 695
AsuC2I CCSGG 1 cut(s) 644
AsuHPI GGTGA 1 cut(s) 83
AvaI CYCGRG 2 cut(s) 46, 518
AvaII GGWCC 1 cut(s) 695
BbsI GAAGAC 1 cut(s) 675
BbvI GCAGC 5 cut(s) 19, 287, 441, 618, 713
BcgI CGANNNNNNTGC 1 cut(s) 30
BcnI CCSGG 1 cut(s) 644
BcoDI GTCTC 3 cut(s) 36, 249, 274
BfmI CTRYAG 1 cut(s) 273
BisI GCNGC 6 cut(s) 8, 276, 455, 563, 632, 702
BlsI GCNGC 6 cut(s) 9, 277, 456, 564, 633, 703
BmcAI AGTACT 1 cut(s) 617
Bme1390I CCNGG 1 cut(s) 644
Bme18I GGWCC 1 cut(s) 695
BmeT110I CYCGRG 2 cut(s) 46, 518
BmgT120I GGNCC 1 cut(s) 695
BmrFI CCNGG 1 cut(s) 644
BmsI GCATC 2 cut(s) 287, 595
BoxI GACNNNNGTC 1 cut(s) 48
BpiI GAAGAC 1 cut(s) 675
Bpu10I CCTNAGC 1 cut(s) 525
BpuEI CTTGAG 2 cut(s) 18, 707
BpuMI CCSGG 1 cut(s) 644
BsaBI GATNNNNATC 1 cut(s) 597
BsaHI GRCGYC 1 cut(s) 411
BsaI GGTCTC 1 cut(s) 274
BsaXI ACNNNNNCTCC 2 cut(s) 246, 276
Bsc4I CCNNNNNNNGG 2 cut(s) 17, 251
Bse1I ACTGG 3 cut(s) 190, 711, 727
Bse3DI GCAATG 1 cut(s) 480
Bse8I GATNNNNATC 1 cut(s) 597
BseGI GGATG 2 cut(s) 52, 639
BseJI GATNNNNATC 1 cut(s) 597
BseLI CCNNNNNNNGG 2 cut(s) 17, 251
BseMI GCAATG 1 cut(s) 480
BseMII CTCAG 1 cut(s) 516
BseNI ACTGG 3 cut(s) 190, 711, 727
BseXI GCAGC 5 cut(s) 19, 287, 441, 618, 713
BsgI GTGCAG 1 cut(s) 306
Bsh1236I CGCG 1 cut(s) 591
Bsh1285I CGRYCG 1 cut(s) 478
BsiEI CGRYCG 1 cut(s) 478
BsiHKCI CYCGRG 2 cut(s) 46, 518
BsiSI CCGG 2 cut(s) 348, 643
BslFI GGGAC 2 cut(s) 113, 152
BslI CCNNNNNNNGG 2 cut(s) 17, 251
BsmAI GTCTC 3 cut(s) 36, 249, 274
BsmFI GGGAC 2 cut(s) 113, 152
Bso31I GGTCTC 1 cut(s) 274
BsoBI CYCGRG 2 cut(s) 46, 518
Bsp143I GATC 4 cut(s) 341, 350, 367, 598
Bsp68I TCGCGA 1 cut(s) 591
BspACI CCGC 2 cut(s) 492, 562
BspCNI CTCAG 1 cut(s) 517
BspFNI CGCG 1 cut(s) 591
BspMAI CTGCAG 1 cut(s) 277
BspPI GGATC 2 cut(s) 349, 358
BspTNI GGTCTC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 480
BsrI ACTGG 3 cut(s) 190, 711, 727
BssMI GATC 4 cut(s) 341, 350, 367, 598
BssNI GRCGYC 1 cut(s) 411
Bst4CI ACNGT 1 cut(s) 476
Bst6I CTCTTC 1 cut(s) 96
BstACI GRCGYC 1 cut(s) 411
BstAPI GCANNNNNTGC 1 cut(s) 284
BstC8I GCNNGC 1 cut(s) 325
BstDEI CTNAG 3 cut(s) 246, 315, 525
BstENI CCTNNNNNAGG 1 cut(s) 249
BstF5I GGATG 2 cut(s) 52, 639
BstFNI CGCG 1 cut(s) 591
BstKTI GATC 4 cut(s) 344, 353, 370, 601
BstMAI GTCTC 3 cut(s) 36, 249, 274
BstMBI GATC 4 cut(s) 341, 350, 367, 598
BstMCI CGRYCG 1 cut(s) 478
BstMWI GCNNNNNNNGC 2 cut(s) 284, 320
BstNSI RCATGY 1 cut(s) 428
BstPAI GACNNNNGTC 1 cut(s) 48
BstSCI CCNGG 1 cut(s) 642
BstSFI CTRYAG 1 cut(s) 273
BstUI CGCG 1 cut(s) 591
BstV1I GCAGC 5 cut(s) 19, 287, 441, 618, 713
BstV2I GAAGAC 1 cut(s) 675
BstX2I RGATCY 2 cut(s) 341, 350
BstYI RGATCY 2 cut(s) 341, 350
BtgZI GCGATG 1 cut(s) 572
BtsCI GGATG 2 cut(s) 52, 639
BtsI GCAGTG 1 cut(s) 456
BtsIMutI CAGTG 3 cut(s) 159, 456, 704
BtuMI TCGCGA 1 cut(s) 591
Cac8I GCNNGC 1 cut(s) 325
CaiI CAGNNNCTG 1 cut(s) 281
Cfr13I GGNCC 1 cut(s) 695
CseI GACGC 1 cut(s) 455
Csp6I GTAC 4 cut(s) 106, 391, 608, 616
CviAII CATG 5 cut(s) 96, 199, 425, 463, 575
CviQI GTAC 4 cut(s) 106, 391, 608, 616
DdeI CTNAG 3 cut(s) 246, 315, 525
DpnI GATC 4 cut(s) 343, 352, 369, 600
DpnII GATC 4 cut(s) 341, 350, 367, 598
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
Eco31I GGTCTC 1 cut(s) 274
Eco32I GATATC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 695
Eco57I CTGAAG 2 cut(s) 395, 420
Eco88I CYCGRG 2 cut(s) 46, 518
EcoNI CCTNNNNNAGG 1 cut(s) 249
EcoRV GATATC 1 cut(s) 124
FaeI CATG 5 cut(s) 99, 202, 428, 466, 578
FaqI GGGAC 2 cut(s) 113, 152
FatI CATG 5 cut(s) 95, 198, 424, 462, 574
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 6 cut(s) 8, 276, 455, 563, 632, 702
FokI GGATG 2 cut(s) 39, 626
Fsp4HI GCNGC 6 cut(s) 8, 276, 455, 563, 632, 702
GluI GCNGC 6 cut(s) 8, 276, 455, 563, 632, 702
HapII CCGG 2 cut(s) 348, 643
HgaI GACGC 1 cut(s) 455
Hin1I GRCGYC 1 cut(s) 411
Hin1II CATG 5 cut(s) 99, 202, 428, 466, 578
HincII GTYRAC 1 cut(s) 90
HindII GTYRAC 1 cut(s) 90
HinfI GANTC 4 cut(s) 44, 49, 225, 714
HpaI GTTAAC 1 cut(s) 90
HpaII CCGG 2 cut(s) 348, 643
HphI GGTGA 1 cut(s) 83
Hpy166II GTNNAC 3 cut(s) 43, 90, 415
Hpy188I TCNGA 1 cut(s) 305
Hpy188III TCNNGA 5 cut(s) 56, 398, 518, 547, 590
Hpy8I GTNNAC 3 cut(s) 43, 90, 415
HpyAV CCTTC 4 cut(s) 395, 524, 641, 674
HpyCH4III ACNGT 1 cut(s) 476
HpyCH4IV ACGT 1 cut(s) 411
HpyCH4V TGCA 5 cut(s) 7, 275, 287, 752, 758
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 320
HpyF3I CTNAG 3 cut(s) 246, 315, 525
HpySE526I ACGT 1 cut(s) 411
Hsp92I GRCGYC 1 cut(s) 411
Hsp92II CATG 5 cut(s) 99, 202, 428, 466, 578
KspAI GTTAAC 1 cut(s) 90
Kzo9I GATC 4 cut(s) 341, 350, 367, 598
Lsp1109I GCAGC 5 cut(s) 19, 287, 441, 618, 713
LweI GCATC 2 cut(s) 287, 595
MaeII ACGT 1 cut(s) 411
MalI GATC 4 cut(s) 343, 352, 369, 600
MboI GATC 4 cut(s) 341, 350, 367, 598
MboII GAAGA 3 cut(s) 113, 388, 680
MflI RGATCY 2 cut(s) 341, 350
MluCI AATT 4 cut(s) 12, 308, 405, 437
MlyI GAGTC 3 cut(s) 38, 58, 708
MmeI TCCRAC 2 cut(s) 319, 691
MnlI CCTC 5 cut(s) 122, 148, 180, 252, 774
MroXI GAANNNNTTC 1 cut(s) 499
MseI TTAA 3 cut(s) 89, 147, 772
MslI CAYNNNNRTG 3 cut(s) 162, 429, 485
MspI CCGG 2 cut(s) 348, 643
MspR9I CCNGG 1 cut(s) 644
MvnI CGCG 1 cut(s) 591
MwoI GCNNNNNNNGC 2 cut(s) 284, 320
NciI CCSGG 1 cut(s) 644
NdeII GATC 4 cut(s) 341, 350, 367, 598
NlaIII CATG 5 cut(s) 99, 202, 428, 466, 578
NruI TCGCGA 1 cut(s) 591
NspI RCATGY 1 cut(s) 428
PaeR7I CTCGAG 1 cut(s) 46
PdmI GAANNNNTTC 1 cut(s) 499
PfeI GAWTC 1 cut(s) 225
PflMI CCANNNNNTGG 1 cut(s) 17
PfoI TCCNGGA 1 cut(s) 642
PkrI GCNGC 6 cut(s) 9, 277, 456, 564, 633, 703
PleI GAGTC 3 cut(s) 38, 57, 708
PpsI GAGTC 3 cut(s) 38, 57, 708
PshAI GACNNNNGTC 1 cut(s) 48
PspPI GGNCC 1 cut(s) 695
PspXI VCTCGAGB 1 cut(s) 46
PstI CTGCAG 1 cut(s) 277
PstNI CAGNNNCTG 1 cut(s) 281
PsuI RGATCY 2 cut(s) 341, 350
RruI TCGCGA 1 cut(s) 591
RsaI GTAC 4 cut(s) 107, 392, 609, 617
RsaNI GTAC 4 cut(s) 106, 391, 608, 616
RseI CAYNNNNRTG 3 cut(s) 162, 429, 485
SaqAI TTAA 3 cut(s) 89, 147, 772
SatI GCNGC 6 cut(s) 8, 276, 455, 563, 632, 702
Sau3AI GATC 4 cut(s) 341, 350, 367, 598
Sau96I GGNCC 1 cut(s) 695
ScaI AGTACT 1 cut(s) 617
SchI GAGTC 3 cut(s) 38, 58, 708
ScrFI CCNGG 1 cut(s) 644
SfaNI GCATC 2 cut(s) 287, 595
SfcI CTRYAG 1 cut(s) 273
Sfr274I CTCGAG 1 cut(s) 46
SinI GGWCC 1 cut(s) 695
SlaI CTCGAG 1 cut(s) 46
SmiMI CAYNNNNRTG 3 cut(s) 162, 429, 485
SmlI CTYRAG 3 cut(s) 33, 46, 686
SmoI CTYRAG 3 cut(s) 33, 46, 686
Sse9I AATT 4 cut(s) 12, 308, 405, 437
SsiI CCGC 2 cut(s) 492, 562
StyD4I CCNGG 1 cut(s) 642
TaaI ACNGT 1 cut(s) 476
TaiI ACGT 1 cut(s) 414
TaqI TCGA 1 cut(s) 47
TasI AATT 4 cut(s) 12, 308, 405, 437
TatI WGTACW 2 cut(s) 105, 615
TauI GCSGC 1 cut(s) 565
TfiI GAWTC 1 cut(s) 225
Tru1I TTAA 3 cut(s) 89, 147, 772
Tru9I TTAA 3 cut(s) 89, 147, 772
TscAI CASTG 3 cut(s) 166, 456, 711
TseI GCWGC 5 cut(s) 7, 275, 454, 631, 701
TspDTI ATGAA 1 cut(s) 479
TspRI CASTG 3 cut(s) 166, 456, 711
Van91I CCANNNNNTGG 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 695
XagI CCTNNNNNAGG 1 cut(s) 249
XceI RCATGY 1 cut(s) 428
XhoI CTCGAG 1 cut(s) 46
XmiI GTMKAC 1 cut(s) 414
XmnI GAANNNNTTC 1 cut(s) 499
ZraI GACGTC 1 cut(s) 412
ZrmI AGTACT 1 cut(s) 617
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.