RLG00000015629

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000431
Physical Location & Seq
Forward (+)
286427 .. 289482
3056 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015629

Sequence Viewer

Length: 1056 bp
ATGGCGGAGTTTAAAGTGAAGAACAAGCAAGTGTTGTTCAACAACTATGTCGAAGGCTTTCCCAAAGAGTCGGCCATGATCGTTACCCATGCTTCCACCATCAGACTCAAAGTTCCGGCAGATGCTCCCAATTCCGTTTTGCTCAAGAACCTCTACTTGTCCTGCGATCCAGTCATGCGCATCCGCATGAGGAAACCTGGGGACGAAACTTCATCTTATTTTACGCCCTATGCCCCTGGCTCCCCTCTGAGTGGGTATGGAGTGGGTGAAGTTGTAGATTCTGGGCACCCAGACTTTAAGGAAGGTGACCTTGTCTGGGGAACAACCAAATGGGAACACTACACCTTGATCACGCGACCAGAAAGCCTCCATAAGATCCAACACGCTGACGTTCCTCTTTCCTACTATACCGGTATATTTGGTATGCCTGGGATGACCGCCTATGCAGGCTTCAATGAAGTTTGTTCTCCTAAGAAGGGAGAATATGTCTTCATTTCAGCGGCATCAGGTGCCGTTGGTCAGCTGGTTGGACAATTAGCAAAATTGTTGGTTGTTATGTTGTTGGAAGTGCTGGAAGTAAAGAAAAGGTATAAAGTTGACCTTTTGAAGAATAAGTTAAATTTTGATGAAGCTTTCAACTATAAGGAAGAGCATGACTTAACCGCAGCTCTGAAAAGGTATTTTCCAGAAGGCATTGACATATACTTTGAGAATGTTGGTGGAAAATTTCTGGATGCAGTCCTGCTCAACATGAGAGTCCACGGCCGGATTGCAGTGTGTGGAATGATTTCACAGTACAATCTTGAAAAGCCTGAAGGTGTGACAAATTTGATGTGCCTTTTATACAAGCGGATTCATATGCAAGGATTTACAGTCCGCGATTACTATCACCTCTATCCCAAGTACCTGGACTATATTCTGCCTTGCATAAGAGAGGGAAAGGTGATATACTTGGAAGACATTGCTGAAGGCCTTGAGAATGGACCATCAGTGTTGGTAGGACTCTTTAGTGGTCGCAATGTTGGCAATCAACTAGTTTCAATTTCCCACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

352

Amino Acids

39.47

Weight (kDa)

7.14

Isoelectric Point (pI)

23.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 9 - 125 2e-22 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 171 - 304 7.3e-15 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 179
AccB1I GGYRCC 2 cut(s) 285, 509
AccII CGCG 2 cut(s) 355, 879
AciI CCGC 7 cut(s) 5, 184, 438, 500, 663, 850, 877
AclWI GGATC 2 cut(s) 161, 370
AcoI YGGCCR 2 cut(s) 72, 763
AcsI RAATTY 3 cut(s) 619, 725, 826
AcuI CTGAAG 2 cut(s) 834, 987
AfaI GTAC 2 cut(s) 797, 905
AfiI CCNNNNNNNGG 3 cut(s) 251, 316, 476
AgeI ACCGGT 1 cut(s) 410
AgsI TTSAA 6 cut(s) 40, 454, 607, 637, 806, 1041
AhlI ACTAGT 1 cut(s) 1033
AjnI CCWGG 4 cut(s) 196, 235, 427, 906
AluBI AGCT 3 cut(s) 523, 632, 668
AluI AGCT 3 cut(s) 523, 632, 668
AlwI GGATC 2 cut(s) 161, 370
AoxI GGCC 3 cut(s) 72, 763, 970
ApeKI GCWGC 1 cut(s) 665
ApoI RAATTY 3 cut(s) 619, 725, 826
ArsI GACNNNNNNTTYG 2 cut(s) 689, 721
AsiGI ACCGGT 1 cut(s) 410
Asp700I GAANNNNTTC 2 cut(s) 57, 787
AspLEI GCGC 1 cut(s) 180
AspS9I GGNCC 1 cut(s) 983
AsuHPI GGTGA 4 cut(s) 278, 317, 881, 955
AvaII GGWCC 1 cut(s) 983
BaeGI GKGCMC 1 cut(s) 288
BanI GGYRCC 2 cut(s) 285, 509
BbsI GAAGAC 2 cut(s) 481, 963
BbvI GCAGC 1 cut(s) 677
BccI CCATC 2 cut(s) 107, 994
BceAI ACGGC 2 cut(s) 497, 778
BciT130I CCWGG 4 cut(s) 198, 237, 429, 908
BclI TGATCA 1 cut(s) 348
BcuI ACTAGT 1 cut(s) 1033
BfaI CTAG 1 cut(s) 1034
BisI GCNGC 2 cut(s) 501, 666
BlsI GCNGC 2 cut(s) 502, 667
Bme1390I CCNGG 4 cut(s) 198, 237, 429, 908
Bme18I GGWCC 1 cut(s) 983
BmgT120I GGNCC 1 cut(s) 983
BmiI GGNNCC 3 cut(s) 241, 287, 511
BmrFI CCNGG 4 cut(s) 198, 237, 429, 908
BmsI GCATC 4 cut(s) 112, 189, 512, 724
BpiI GAAGAC 2 cut(s) 481, 963
BpuEI CTTGAG 2 cut(s) 128, 995
BsaBI GATNNNNATC 1 cut(s) 885
BsaJI CCNNGG 4 cut(s) 197, 235, 428, 760
BsaWI WCCGGW 1 cut(s) 410
BsaXI ACNNNNNCTCC 2 cut(s) 471, 501
Bsc4I CCNNNNNNNGG 3 cut(s) 251, 316, 476
Bse118I RCCGGY 1 cut(s) 410
Bse1I ACTGG 2 cut(s) 170, 1051
Bse3DI GCAATG 2 cut(s) 960, 1024
Bse8I GATNNNNATC 1 cut(s) 885
BseBI CCWGG 4 cut(s) 198, 237, 429, 908
BseDI CCNNGG 4 cut(s) 197, 235, 428, 760
BseGI GGATG 3 cut(s) 180, 438, 739
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 3 cut(s) 251, 316, 476
BseMI GCAATG 2 cut(s) 960, 1024
BseMII CTCAG 1 cut(s) 239
BseNI ACTGG 2 cut(s) 170, 1051
BseSI GKGCMC 1 cut(s) 288
BseX3I CGGCCG 1 cut(s) 763
BseXI GCAGC 1 cut(s) 677
Bsh1236I CGCG 2 cut(s) 355, 879
Bsh1285I CGRYCG 1 cut(s) 766
BshFI GGCC 3 cut(s) 74, 765, 972
BshNI GGYRCC 2 cut(s) 285, 509
BshTI ACCGGT 1 cut(s) 410
BsiEI CGRYCG 1 cut(s) 766
BsiSI CCGG 3 cut(s) 116, 411, 766
BslFI GGGAC 1 cut(s) 215
BslI CCNNNNNNNGG 3 cut(s) 251, 316, 476
BsmFI GGGAC 1 cut(s) 215
BsnI GGCC 3 cut(s) 74, 765, 972
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 4 cut(s) 78, 166, 348, 375
BspACI CCGC 7 cut(s) 5, 184, 438, 500, 663, 850, 877
BspANI GGCC 3 cut(s) 74, 765, 972
BspCNI CTCAG 1 cut(s) 240
BspFNI CGCG 2 cut(s) 355, 879
BspLI GGNNCC 3 cut(s) 241, 287, 511
BspPI GGATC 2 cut(s) 161, 370
BspQI GCTCTTC 1 cut(s) 642
BspT107I GGYRCC 2 cut(s) 285, 509
BsrDI GCAATG 2 cut(s) 960, 1024
BsrFI RCCGGY 1 cut(s) 410
BsrI ACTGG 2 cut(s) 170, 1051
BssAI RCCGGY 1 cut(s) 410
BssECI CCNNGG 4 cut(s) 197, 235, 428, 760
BssMI GATC 4 cut(s) 78, 166, 348, 375
Bst2UI CCWGG 4 cut(s) 198, 237, 429, 908
Bst4CI ACNGT 2 cut(s) 795, 874
Bst6I CTCTTC 1 cut(s) 642
BstAPI GCANNNNNTGC 1 cut(s) 509
BstC8I GCNNGC 1 cut(s) 448
BstDEI CTNAG 2 cut(s) 248, 471
BstDSI CCRYGG 1 cut(s) 760
BstEII GGTNACC 1 cut(s) 305
BstF5I GGATG 3 cut(s) 180, 438, 739
BstFNI CGCG 2 cut(s) 355, 879
BstHHI GCGC 1 cut(s) 180
BstKTI GATC 4 cut(s) 81, 169, 351, 378
BstMBI GATC 4 cut(s) 78, 166, 348, 375
BstMCI CGRYCG 1 cut(s) 766
BstMWI GCNNNNNNNGC 2 cut(s) 509, 1023
BstNI CCWGG 4 cut(s) 198, 237, 429, 908
BstPI GGTNACC 1 cut(s) 305
BstSCI CCNGG 4 cut(s) 196, 235, 427, 906
BstSLI GKGCMC 1 cut(s) 288
BstUI CGCG 2 cut(s) 355, 879
BstV1I GCAGC 1 cut(s) 677
BstV2I GAAGAC 2 cut(s) 481, 963
BstX2I RGATCY 1 cut(s) 375
BstXI CCANNNNNNTGG 1 cut(s) 907
BstYI RGATCY 1 cut(s) 375
BstZI CGGCCG 1 cut(s) 763
BsuRI GGCC 3 cut(s) 74, 765, 972
BtgI CCRYGG 1 cut(s) 760
BtsCI GGATG 3 cut(s) 180, 438, 739
BtsI GCAGTG 1 cut(s) 780
BtsIMutI CAGTG 2 cut(s) 780, 996
Cac8I GCNNGC 1 cut(s) 448
CfoI GCGC 1 cut(s) 180
Cfr10I RCCGGY 1 cut(s) 410
Cfr13I GGNCC 1 cut(s) 983
Csp6I GTAC 2 cut(s) 796, 904
CspAI ACCGGT 1 cut(s) 410
CviAII CATG 6 cut(s) 76, 89, 175, 187, 653, 751
CviQI GTAC 2 cut(s) 796, 904
DdeI CTNAG 2 cut(s) 248, 471
DpnI GATC 4 cut(s) 80, 168, 350, 377
DpnII GATC 4 cut(s) 78, 166, 348, 375
DraI TTTAAA 1 cut(s) 13
EaeI YGGCCR 2 cut(s) 72, 763
EagI CGGCCG 1 cut(s) 763
Eam1104I CTCTTC 1 cut(s) 642
EarI CTCTTC 1 cut(s) 642
EciI GGCGGA 1 cut(s) 20
EclXI CGGCCG 1 cut(s) 763
Eco147I AGGCCT 1 cut(s) 972
Eco47I GGWCC 1 cut(s) 983
Eco52I CGGCCG 1 cut(s) 763
Eco57I CTGAAG 2 cut(s) 834, 987
Eco91I GGTNACC 1 cut(s) 305
EcoO65I GGTNACC 1 cut(s) 305
EcoRII CCWGG 4 cut(s) 196, 235, 427, 906
FaeI CATG 6 cut(s) 79, 92, 178, 190, 656, 754
FalI AAGNNNNNCTT 4 cut(s) 294, 326, 585, 617
FaqI GGGAC 1 cut(s) 215
FatI CATG 6 cut(s) 75, 88, 174, 186, 652, 750
FauNDI CATATG 1 cut(s) 858
FbaI TGATCA 1 cut(s) 348
Fnu4HI GCNGC 2 cut(s) 501, 666
FokI GGATG 3 cut(s) 167, 445, 746
Fsp4HI GCNGC 2 cut(s) 501, 666
FspAI RTGCGCAY 1 cut(s) 179
FspBI CTAG 1 cut(s) 1034
FspI TGCGCA 1 cut(s) 179
GlaI GCGC 1 cut(s) 179
GluI GCNGC 2 cut(s) 501, 666
HaeIII GGCC 3 cut(s) 74, 765, 972
HapII CCGG 3 cut(s) 116, 411, 766
HhaI GCGC 1 cut(s) 180
Hin1II CATG 6 cut(s) 79, 92, 178, 190, 656, 754
Hin6I GCGC 1 cut(s) 178
HinP1I GCGC 1 cut(s) 178
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HindIII AAGCTT 1 cut(s) 630
HinfI GANTC 6 cut(s) 68, 105, 278, 756, 853, 1002
HpaII CCGG 3 cut(s) 116, 411, 766
HphI GGTGA 4 cut(s) 278, 317, 881, 955
Hpy166II GTNNAC 2 cut(s) 598, 760
Hpy188I TCNGA 3 cut(s) 104, 249, 672
Hpy188III TCNNGA 4 cut(s) 145, 686, 731, 803
Hpy8I GTNNAC 2 cut(s) 598, 760
HpyAV CCTTC 6 cut(s) 47, 296, 469, 683, 809, 962
HpyCH4III ACNGT 2 cut(s) 795, 874
HpyCH4IV ACGT 1 cut(s) 390
HpyCH4V TGCA 5 cut(s) 446, 737, 773, 862, 927
HpyF10VI GCNNNNNNNGC 2 cut(s) 509, 1023
HpyF3I CTNAG 2 cut(s) 248, 471
HpySE526I ACGT 1 cut(s) 390
Hsp92II CATG 6 cut(s) 79, 92, 178, 190, 656, 754
HspAI GCGC 1 cut(s) 178
Ksp22I TGATCA 1 cut(s) 348
Kzo9I GATC 4 cut(s) 78, 166, 348, 375
LguI GCTCTTC 1 cut(s) 642
LmnI GCTCC 2 cut(s) 130, 245
Lsp1109I GCAGC 1 cut(s) 677
LweI GCATC 4 cut(s) 112, 189, 512, 724
MaeI CTAG 1 cut(s) 1034
MaeII ACGT 1 cut(s) 390
MaeIII GTNAC 3 cut(s) 82, 305, 820
MalI GATC 4 cut(s) 80, 168, 350, 377
MboI GATC 4 cut(s) 78, 166, 348, 375
MboII GAAGA 5 cut(s) 31, 481, 619, 659, 968
MflI RGATCY 1 cut(s) 375
MhlI GDGCHC 1 cut(s) 288
MluCI AATT 7 cut(s) 130, 533, 542, 619, 725, 826, 1041
MlyI GAGTC 4 cut(s) 77, 99, 765, 996
MmeI TCCRAC 3 cut(s) 403, 508, 543
MnlI CCTC 7 cut(s) 161, 183, 255, 377, 405, 902, 928
MroXI GAANNNNTTC 2 cut(s) 57, 787
MseI TTAA 4 cut(s) 12, 297, 617, 659
MslI CAYNNNNRTG 1 cut(s) 185
MspA1I CMGCKG 2 cut(s) 500, 523
MspI CCGG 3 cut(s) 116, 411, 766
MspR9I CCNGG 4 cut(s) 198, 237, 429, 908
MvaI CCWGG 4 cut(s) 198, 237, 429, 908
MvnI CGCG 2 cut(s) 355, 879
MwoI GCNNNNNNNGC 2 cut(s) 509, 1023
NdeI CATATG 1 cut(s) 858
NdeII GATC 4 cut(s) 78, 166, 348, 375
NlaIII CATG 6 cut(s) 79, 92, 178, 190, 656, 754
NlaIV GGNNCC 3 cut(s) 241, 287, 511
NmuCI GTSAC 2 cut(s) 305, 820
NsbI TGCGCA 1 cut(s) 179
PceI AGGCCT 1 cut(s) 972
PciSI GCTCTTC 1 cut(s) 642
PdmI GAANNNNTTC 2 cut(s) 57, 787
PfeI GAWTC 2 cut(s) 278, 853
PflFI GACNNNGTC 1 cut(s) 311
PinAI ACCGGT 1 cut(s) 410
PkrI GCNGC 2 cut(s) 502, 667
PleI GAGTC 4 cut(s) 76, 99, 764, 996
PpsI GAGTC 4 cut(s) 76, 99, 764, 996
Psp6I CCWGG 4 cut(s) 196, 235, 427, 906
PspEI GGTNACC 1 cut(s) 305
PspGI CCWGG 4 cut(s) 196, 235, 427, 906
PspN4I GGNNCC 3 cut(s) 241, 287, 511
PspPI GGNCC 1 cut(s) 983
PsuI RGATCY 1 cut(s) 375
PsyI GACNNNGTC 1 cut(s) 311
PvuII CAGCTG 1 cut(s) 523
RsaI GTAC 2 cut(s) 797, 905
RsaNI GTAC 2 cut(s) 796, 904
RseI CAYNNNNRTG 1 cut(s) 185
SapI GCTCTTC 1 cut(s) 642
SaqAI TTAA 4 cut(s) 12, 297, 617, 659
SatI GCNGC 2 cut(s) 501, 666
Sau3AI GATC 4 cut(s) 78, 166, 348, 375
Sau96I GGNCC 1 cut(s) 983
SchI GAGTC 4 cut(s) 77, 99, 765, 996
ScrFI CCNGG 4 cut(s) 198, 237, 429, 908
SduI GDGCHC 1 cut(s) 288
SfaNI GCATC 4 cut(s) 112, 189, 512, 724
SinI GGWCC 1 cut(s) 983
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 2 cut(s) 143, 974
SmoI CTYRAG 2 cut(s) 143, 974
SpeI ACTAGT 1 cut(s) 1033
Sse9I AATT 7 cut(s) 130, 533, 542, 619, 725, 826, 1041
SseBI AGGCCT 1 cut(s) 972
SsiI CCGC 7 cut(s) 5, 184, 438, 500, 663, 850, 877
SspMI CTAG 1 cut(s) 1034
StuI AGGCCT 1 cut(s) 972
StyD4I CCNGG 4 cut(s) 196, 235, 427, 906
TaaI ACNGT 2 cut(s) 795, 874
TaiI ACGT 1 cut(s) 393
TaqI TCGA 1 cut(s) 51
TasI AATT 7 cut(s) 130, 533, 542, 619, 725, 826, 1041
TatI WGTACW 1 cut(s) 795
TauI GCSGC 1 cut(s) 503
TfiI GAWTC 2 cut(s) 278, 853
Tru1I TTAA 4 cut(s) 12, 297, 617, 659
Tru9I TTAA 4 cut(s) 12, 297, 617, 659
TscAI CASTG 2 cut(s) 780, 996
TseFI GTSAC 2 cut(s) 305, 820
TseI GCWGC 1 cut(s) 665
Tsp45I GTSAC 2 cut(s) 305, 820
TspDTI ATGAA 5 cut(s) 201, 471, 481, 642, 845
TspGWI ACGGA 1 cut(s) 124
TspRI CASTG 2 cut(s) 780, 996
Tth111I GACNNNGTC 1 cut(s) 311
VpaK11BI GGWCC 1 cut(s) 983
XapI RAATTY 3 cut(s) 619, 725, 826
XmnI GAANNNNTTC 2 cut(s) 57, 787
XspI CTAG 1 cut(s) 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.