pycom02g00040

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000431
Physical Location & Seq
Forward (+)
31188 .. 33964
2777 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g00040.4

Sequence Viewer

Length: 1053 bp
ATGGCGGAAGTGAAGAACAAACAGGTGATATTCAAGGAGTATGTGGAAGGGTCTCCCAAAGAGTCGGACATGAACTTTACAGATGCTGCCACCATCAAGTTGAAACTCCCTGATGATGAAGACGAAGCTTCGAAAGCCGTGTTGGTGAAGAACCTCTACTTGTCATGTGATCCTGTGATGCGCATCCTTATGAGAAAACCTGGAGACGAAACTTCAGCTTATTTTACACCCTATGCCCCTGGTTCTCCCTTGAGTGGGTATGGAGTGGCTAAAGTTTTGGATTCCAGAAACTCGAACTTTAAGGAAGGTGACCTAGTCTGGGGTACAACCAAATGGGAAGAGTACAGCATAATCACCGCACTGGAAAGCCTCCGTAAGATCCAACACACCGATGTACCCCTTTCCTACTACACTGGCATTCTCGGTATGCCTGGTATGACTGCCTATGCAGGCTTCAACGAAGTTTGTTCTCCTAAGAAGGGAGAATATGTCTTCATTTCAGCGGCATCTGGTGCGGTTGGTCAGCTAGTTGGACAGTTTGCAAAGTTGTTGGGTTGTTACGTTGTCGGAAGTGCTGGAAGTAAAGAGAAGGTTGACCTTTTGAAGAGTAAGCTTAACTTTGATGAAGCTTTCAATTACAAGGAAGAGCATGACTTGAACGCCACTCTGAAAAGGTACTTTCCCGAAGGCATTGACATATACTTTGAGAATGTCGGGGGGAAATTTCTTGACGCAGTCCTCCTTAACATGAGAGTCCACGGCCGCATTGCAGTGTGCGGAATGATTTCACAGTACAATCTTGATCAACCTGAAGGTGTCACAAATTTGATGTGTCTCGTATATAAGCGGATCCATATGCAAGGTTTTACAGTCCGCGATTACTATCACCTCTATCCCAAGTACTTGGACTTTATACTTCCTTGTATAAGAGAGGGAAGGGTGGTCTATTTAGAAGACATTGCTCAAGGCCTCGAGAAAGGACCAGCTGCGTTGGTTGGACTTTTTAGTGGACGCAACGTCGGAAAACAAGTAGTTTCAGTTTCCCTGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

351

Amino Acids

38.96

Weight (kDa)

6.04

Isoelectric Point (pI)

24.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 182
AccII CGCG 1 cut(s) 876
AciI CCGC 8 cut(s) 5, 357, 503, 515, 763, 777, 847, 874
AclWI GGATC 4 cut(s) 164, 373, 844, 857
AcoI YGGCCR 1 cut(s) 760
AcsI RAATTY 2 cut(s) 722, 823
AcuI CTGAAG 2 cut(s) 198, 831
AfaI GTAC 6 cut(s) 325, 344, 396, 677, 794, 902
AfiI CCNNNNNNNGG 4 cut(s) 254, 255, 319, 479
AgsI TTSAA 6 cut(s) 34, 103, 457, 604, 634, 658
AhdI GACNNNNNGTC 1 cut(s) 1016
AjnI CCWGG 3 cut(s) 199, 238, 430
AjuI GAANNNNNNNTTGG 2 cut(s) 125, 157
AluBI AGCT 6 cut(s) 128, 218, 526, 613, 629, 986
AluI AGCT 6 cut(s) 128, 218, 526, 613, 629, 986
Alw26I GTCTC 3 cut(s) 57, 198, 839
AlwI GGATC 4 cut(s) 164, 373, 844, 857
AlwNI CAGNNNCTG 1 cut(s) 86
Ama87I CYCGRG 1 cut(s) 971
AoxI GGCC 2 cut(s) 760, 967
ApeKI GCWGC 2 cut(s) 86, 986
ApoI RAATTY 2 cut(s) 722, 823
ArsI GACNNNNNNTTYG 2 cut(s) 686, 718
Asp700I GAANNNNTTC 1 cut(s) 784
AspLEI GCGC 1 cut(s) 183
AspS9I GGNCC 1 cut(s) 980
AsuHPI GGTGA 5 cut(s) 37, 157, 320, 346, 878
AsuII TTCGAA 1 cut(s) 131
AvaI CYCGRG 1 cut(s) 971
AvaII GGWCC 1 cut(s) 980
BaeI ACNNNNGTAYC 2 cut(s) 378, 411
BamHI GGATCC 1 cut(s) 849
BarI GAAGNNNNNNTAC 2 cut(s) 140, 172
BbsI GAAGAC 3 cut(s) 126, 484, 960
BbvI GCAGC 2 cut(s) 73, 973
BccI CCATC 1 cut(s) 101
BceAI ACGGC 2 cut(s) 122, 775
BciT130I CCWGG 3 cut(s) 201, 240, 432
BclI TGATCA 1 cut(s) 802
BcoDI GTCTC 3 cut(s) 57, 198, 839
BfaI CTAG 2 cut(s) 314, 527
BisI GCNGC 4 cut(s) 87, 504, 763, 987
BlsI GCNGC 4 cut(s) 88, 505, 764, 988
BmcAI AGTACT 1 cut(s) 902
Bme1390I CCNGG 3 cut(s) 201, 240, 432
Bme18I GGWCC 1 cut(s) 980
BmeRI GACNNNNNGTC 1 cut(s) 1016
BmeT110I CYCGRG 1 cut(s) 971
BmgT120I GGNCC 1 cut(s) 980
BmiI GGNNCC 1 cut(s) 851
BmrFI CCNGG 3 cut(s) 201, 240, 432
BmsI GCATC 4 cut(s) 73, 168, 192, 515
BpiI GAAGAC 3 cut(s) 126, 484, 960
BpmI CTGGAG 1 cut(s) 222
Bpu14I TTCGAA 1 cut(s) 131
BpuEI CTTGAG 2 cut(s) 271, 948
BsaBI GATNNNNATC 2 cut(s) 182, 882
BsaI GGTCTC 1 cut(s) 57
BsaJI CCNNGG 2 cut(s) 238, 757
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 4 cut(s) 254, 255, 319, 479
Bse1I ACTGG 2 cut(s) 366, 418
Bse3DI GCAATG 2 cut(s) 765, 957
Bse8I GATNNNNATC 2 cut(s) 182, 882
BseBI CCWGG 3 cut(s) 201, 240, 432
BseDI CCNNGG 2 cut(s) 238, 757
BseGI GGATG 1 cut(s) 183
BseJI GATNNNNATC 2 cut(s) 182, 882
BseLI CCNNNNNNNGG 4 cut(s) 254, 255, 319, 479
BseMI GCAATG 2 cut(s) 765, 957
BseNI ACTGG 2 cut(s) 366, 418
BseX3I CGGCCG 1 cut(s) 760
BseXI GCAGC 2 cut(s) 73, 973
Bsh1236I CGCG 1 cut(s) 876
Bsh1285I CGRYCG 1 cut(s) 763
BshFI GGCC 2 cut(s) 762, 969
BsiEI CGRYCG 1 cut(s) 763
BsiHKCI CYCGRG 1 cut(s) 971
BslI CCNNNNNNNGG 4 cut(s) 254, 255, 319, 479
BsmAI GTCTC 3 cut(s) 57, 198, 839
BsmBI CGTCTC 1 cut(s) 198
BsmI GAATGC 1 cut(s) 417
BsnI GGCC 2 cut(s) 762, 969
Bso31I GGTCTC 1 cut(s) 57
BsoBI CYCGRG 1 cut(s) 971
Bsp119I TTCGAA 1 cut(s) 131
Bsp143I GATC 4 cut(s) 169, 378, 802, 849
BspACI CCGC 8 cut(s) 5, 357, 503, 515, 763, 777, 847, 874
BspANI GGCC 2 cut(s) 762, 969
BspFNI CGCG 1 cut(s) 876
BspLI GGNNCC 1 cut(s) 851
BspPI GGATC 4 cut(s) 164, 373, 844, 857
BspQI GCTCTTC 1 cut(s) 639
BspT104I TTCGAA 1 cut(s) 131
BspTNI GGTCTC 1 cut(s) 57
BsrDI GCAATG 2 cut(s) 765, 957
BsrI ACTGG 2 cut(s) 366, 418
BssECI CCNNGG 2 cut(s) 238, 757
BssMI GATC 4 cut(s) 169, 378, 802, 849
Bst2UI CCWGG 3 cut(s) 201, 240, 432
Bst4CI ACNGT 3 cut(s) 537, 792, 871
Bst6I CTCTTC 3 cut(s) 333, 599, 639
BstAPI GCANNNNNTGC 1 cut(s) 512
BstBI TTCGAA 1 cut(s) 131
BstC8I GCNNGC 1 cut(s) 451
BstDEI CTNAG 1 cut(s) 474
BstDSI CCRYGG 1 cut(s) 757
BstEII GGTNACC 1 cut(s) 308
BstF5I GGATG 1 cut(s) 183
BstFNI CGCG 1 cut(s) 876
BstHHI GCGC 1 cut(s) 183
BstKTI GATC 4 cut(s) 172, 381, 805, 852
BstMAI GTCTC 3 cut(s) 57, 198, 839
BstMBI GATC 4 cut(s) 169, 378, 802, 849
BstMCI CGRYCG 1 cut(s) 763
BstMWI GCNNNNNNNGC 2 cut(s) 134, 512
BstNI CCWGG 3 cut(s) 201, 240, 432
BstPI GGTNACC 1 cut(s) 308
BstSCI CCNGG 3 cut(s) 199, 238, 430
BstUI CGCG 1 cut(s) 876
BstV1I GCAGC 2 cut(s) 73, 973
BstV2I GAAGAC 3 cut(s) 126, 484, 960
BstX2I RGATCY 2 cut(s) 378, 849
BstXI CCANNNNNNTGG 1 cut(s) 904
BstYI RGATCY 2 cut(s) 378, 849
BstZI CGGCCG 1 cut(s) 760
BsuRI GGCC 2 cut(s) 762, 969
BtgI CCRYGG 1 cut(s) 757
BtsCI GGATG 1 cut(s) 183
BtsI GCAGTG 1 cut(s) 777
BtsIMutI CAGTG 3 cut(s) 359, 411, 777
Cac8I GCNNGC 1 cut(s) 451
CaiI CAGNNNCTG 1 cut(s) 86
CfoI GCGC 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 980
CseI GACGC 2 cut(s) 740, 1020
Csp6I GTAC 6 cut(s) 324, 343, 395, 676, 793, 901
CviAII CATG 4 cut(s) 70, 165, 650, 748
CviQI GTAC 6 cut(s) 324, 343, 395, 676, 793, 901
DdeI CTNAG 1 cut(s) 474
DpnI GATC 4 cut(s) 171, 380, 804, 851
DpnII GATC 4 cut(s) 169, 378, 802, 849
DriI GACNNNNNGTC 1 cut(s) 1016
EaeI YGGCCR 1 cut(s) 760
EagI CGGCCG 1 cut(s) 760
Eam1104I CTCTTC 3 cut(s) 333, 599, 639
Eam1105I GACNNNNNGTC 1 cut(s) 1016
EarI CTCTTC 3 cut(s) 333, 599, 639
EciI GGCGGA 1 cut(s) 20
EclXI CGGCCG 1 cut(s) 760
Eco147I AGGCCT 1 cut(s) 969
Eco31I GGTCTC 1 cut(s) 57
Eco47I GGWCC 1 cut(s) 980
Eco52I CGGCCG 1 cut(s) 760
Eco57I CTGAAG 2 cut(s) 198, 831
Eco88I CYCGRG 1 cut(s) 971
Eco91I GGTNACC 1 cut(s) 308
EcoO65I GGTNACC 1 cut(s) 308
EcoRII CCWGG 3 cut(s) 199, 238, 430
Esp3I CGTCTC 1 cut(s) 198
FaeI CATG 4 cut(s) 73, 168, 653, 751
FalI AAGNNNNNCTT 2 cut(s) 602, 634
FatI CATG 4 cut(s) 69, 164, 649, 747
FauNDI CATATG 1 cut(s) 855
FbaI TGATCA 1 cut(s) 802
Fnu4HI GCNGC 4 cut(s) 87, 504, 763, 987
FokI GGATG 1 cut(s) 170
Fsp4HI GCNGC 4 cut(s) 87, 504, 763, 987
FspAI RTGCGCAY 1 cut(s) 182
FspBI CTAG 2 cut(s) 314, 527
FspI TGCGCA 1 cut(s) 182
GlaI GCGC 1 cut(s) 182
GluI GCNGC 4 cut(s) 87, 504, 763, 987
GsuI CTGGAG 1 cut(s) 222
HaeIII GGCC 2 cut(s) 762, 969
HgaI GACGC 2 cut(s) 740, 1020
HhaI GCGC 1 cut(s) 183
Hin1II CATG 4 cut(s) 73, 168, 653, 751
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HincII GTYRAC 1 cut(s) 595
HindII GTYRAC 1 cut(s) 595
HindIII AAGCTT 3 cut(s) 126, 611, 627
HinfI GANTC 3 cut(s) 62, 281, 753
HphI GGTGA 5 cut(s) 37, 157, 320, 346, 878
Hpy166II GTNNAC 3 cut(s) 595, 757, 1010
Hpy188I TCNGA 4 cut(s) 67, 569, 669, 1022
Hpy188III TCNNGA 5 cut(s) 285, 683, 728, 800, 973
Hpy8I GTNNAC 3 cut(s) 595, 757, 1010
Hpy99I CGWCG 1 cut(s) 1022
HpyAV CCTTC 7 cut(s) 41, 299, 472, 583, 680, 806, 930
HpyCH4III ACNGT 3 cut(s) 537, 792, 871
HpyCH4IV ACGT 2 cut(s) 561, 1017
HpyCH4V TGCA 4 cut(s) 449, 542, 770, 859
HpyF10VI GCNNNNNNNGC 2 cut(s) 134, 512
HpyF3I CTNAG 1 cut(s) 474
HpySE526I ACGT 2 cut(s) 561, 1017
Hsp92II CATG 4 cut(s) 73, 168, 653, 751
HspAI GCGC 1 cut(s) 181
Ksp22I TGATCA 1 cut(s) 802
Kzo9I GATC 4 cut(s) 169, 378, 802, 849
LguI GCTCTTC 1 cut(s) 639
Lsp1109I GCAGC 2 cut(s) 73, 973
LweI GCATC 4 cut(s) 73, 168, 192, 515
MaeI CTAG 2 cut(s) 314, 527
MaeII ACGT 2 cut(s) 561, 1017
MaeIII GTNAC 3 cut(s) 308, 557, 817
MalI GATC 4 cut(s) 171, 380, 804, 851
MboI GATC 4 cut(s) 169, 378, 802, 849
MboII GAAGA 8 cut(s) 25, 131, 160, 350, 484, 616, 656, 965
MflI RGATCY 2 cut(s) 378, 849
MluCI AATT 3 cut(s) 634, 722, 823
MlyI GAGTC 2 cut(s) 71, 762
MmeI TCCRAC 6 cut(s) 45, 406, 511, 547, 976, 1000
MnlI CCTC 6 cut(s) 164, 380, 749, 899, 925, 980
MroXI GAANNNNTTC 1 cut(s) 784
MseI TTAA 3 cut(s) 300, 615, 744
MslI CAYNNNNRTG 3 cut(s) 188, 390, 770
MspA1I CMGCKG 2 cut(s) 503, 986
MspR9I CCNGG 3 cut(s) 201, 240, 432
Mva1269I GAATGC 1 cut(s) 417
MvaI CCWGG 3 cut(s) 201, 240, 432
MvnI CGCG 1 cut(s) 876
MwoI GCNNNNNNNGC 2 cut(s) 134, 512
NdeI CATATG 1 cut(s) 855
NdeII GATC 4 cut(s) 169, 378, 802, 849
NlaIII CATG 4 cut(s) 73, 168, 653, 751
NlaIV GGNNCC 1 cut(s) 851
NmuCI GTSAC 2 cut(s) 308, 817
NsbI TGCGCA 1 cut(s) 182
NspV TTCGAA 1 cut(s) 131
PaeR7I CTCGAG 1 cut(s) 971
PceI AGGCCT 1 cut(s) 969
PciSI GCTCTTC 1 cut(s) 639
PctI GAATGC 1 cut(s) 417
PdmI GAANNNNTTC 1 cut(s) 784
PfeI GAWTC 1 cut(s) 281
PflFI GACNNNGTC 2 cut(s) 314, 734
PkrI GCNGC 4 cut(s) 88, 505, 764, 988
PleI GAGTC 2 cut(s) 70, 761
PpsI GAGTC 2 cut(s) 70, 761
Psp6I CCWGG 3 cut(s) 199, 238, 430
PspEI GGTNACC 1 cut(s) 308
PspGI CCWGG 3 cut(s) 199, 238, 430
PspN4I GGNNCC 1 cut(s) 851
PspPI GGNCC 1 cut(s) 980
PstNI CAGNNNCTG 1 cut(s) 86
PsuI RGATCY 2 cut(s) 378, 849
PsyI GACNNNGTC 2 cut(s) 314, 734
PvuII CAGCTG 1 cut(s) 986
RsaI GTAC 6 cut(s) 325, 344, 396, 677, 794, 902
RsaNI GTAC 6 cut(s) 324, 343, 395, 676, 793, 901
RseI CAYNNNNRTG 3 cut(s) 188, 390, 770
SapI GCTCTTC 1 cut(s) 639
SaqAI TTAA 3 cut(s) 300, 615, 744
SatI GCNGC 4 cut(s) 87, 504, 763, 987
Sau3AI GATC 4 cut(s) 169, 378, 802, 849
Sau96I GGNCC 1 cut(s) 980
ScaI AGTACT 1 cut(s) 902
SchI GAGTC 2 cut(s) 71, 762
ScrFI CCNGG 3 cut(s) 201, 240, 432
SfaNI GCATC 4 cut(s) 73, 168, 192, 515
Sfr274I CTCGAG 1 cut(s) 971
SfuI TTCGAA 1 cut(s) 131
SinI GGWCC 1 cut(s) 980
SlaI CTCGAG 1 cut(s) 971
SmiMI CAYNNNNRTG 3 cut(s) 188, 390, 770
SmlI CTYRAG 3 cut(s) 250, 963, 971
SmoI CTYRAG 3 cut(s) 250, 963, 971
Sse9I AATT 3 cut(s) 634, 722, 823
SseBI AGGCCT 1 cut(s) 969
SsiI CCGC 8 cut(s) 5, 357, 503, 515, 763, 777, 847, 874
SspMI CTAG 2 cut(s) 314, 527
StuI AGGCCT 1 cut(s) 969
StyD4I CCNGG 3 cut(s) 199, 238, 430
TaaI ACNGT 3 cut(s) 537, 792, 871
TaiI ACGT 2 cut(s) 564, 1020
TaqI TCGA 3 cut(s) 131, 293, 972
TasI AATT 3 cut(s) 634, 722, 823
TatI WGTACW 3 cut(s) 342, 792, 900
TauI GCSGC 2 cut(s) 506, 765
TfiI GAWTC 1 cut(s) 281
Tru1I TTAA 3 cut(s) 300, 615, 744
Tru9I TTAA 3 cut(s) 300, 615, 744
TscAI CASTG 3 cut(s) 366, 418, 777
TseFI GTSAC 2 cut(s) 308, 817
TseI GCWGC 2 cut(s) 86, 986
Tsp45I GTSAC 2 cut(s) 308, 817
TspDTI ATGAA 4 cut(s) 86, 132, 484, 639
TspGWI ACGGA 1 cut(s) 362
TspRI CASTG 3 cut(s) 366, 418, 777
Tth111I GACNNNGTC 2 cut(s) 314, 734
VpaK11BI GGWCC 1 cut(s) 980
XapI RAATTY 2 cut(s) 722, 823
XhoI CTCGAG 1 cut(s) 971
XmnI GAANNNNTTC 1 cut(s) 784
XspI CTAG 2 cut(s) 314, 527
ZrmI AGTACT 1 cut(s) 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.