RLG00000017753

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
20833071 .. 20837029
3959 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017753

Sequence Viewer

Length: 1026 bp
ATGGCGAGTGGTGAGGGGGAAGTGATGAGGAACAAGCAGGTGATATTCAGGGACTATATGACTGGCAATCCCAAAGAGTCGGACATGTACGTGACAGACAGTAGTACCATTAAGCTCGAGGTTCCACAGGGCTCAGTCGCGGTGCTGGTCAAGAACCTTTACTTGGCGTGTGACCCTTATTTGAGGATCCGAATGGGGCGAATTGAAGGTTATAATCCATTGAGTGGATTTGGAGTGGCTAAAGTCTTGGATTCAGGGCATCCGGAGTTTAAGGAAGGTGACTTGGTTTGGGGAACAACCGGATGGGAAGAGTATAGTCTCATCACAGAACCAGAACAACTCTTCAAGATCCACCACACTGACGTACCCCTTTCCTACTATACTGGACTTCTTGGTGTGCCGGGTATGACTGCCTTTGTCGGTTTCCATGAAGTGTGCTCGCCTAAAAGAGGAGATTCTGTGTTTGTTTCTGCAGCAGCTGGTGCTGTTGGTCAGCTTGTTGGGCAATTTGCAAAGTTGATGGGGTGCTATGTTGTTGGAAGTGTCGGAAGCCAAGAGAAGGTCGATCTACTAAAGAACAAGCTAGGGTTTGATGAGGCTTTCAATTATAAGGAAGAGCATGACCTTGATGCTGCTTTGAAAAGGTACTTCCCAAAAGGCATTGATATTTACTTCGAGAATGTTGGTGGTAAAATGCTGGATGCAGTCCTTCTCAACATGAGACCTCATGGCCATATTGCCGTGTGTGGAATGATCTCACATTACAATCTCAATCAGCCACAAGGCTTTAGCAATCTCGTCTCTCTCATCTACAATCGAATTCGTATAGAAGGCTTCGTTGTTTTCGATTACTTCCATCTCTATCCCAAGTTCTTGGACATGGTGTTGCCTTACATCAGAGAACGAAAAATAGTGTATCTGGAAGATATAGTTGAAGGCCTCGAGAGTGGTCCGGCTGCTCTTGTAGGGCTCTTTAGTGGTCGTAATGTCGGAAAACAAGTAGTTTTGGTTGCTCCAGCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

342

Amino Acids

37.84

Weight (kDa)

5.65

Isoelectric Point (pI)

33.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 12 - 117 3.5e-18 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 162 - 295 2.1e-25 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 213, 609
AarI CACCTGC 1 cut(s) 28
Acc36I ACCTGC 1 cut(s) 28
AccB7I CCANNNNNTGG 1 cut(s) 224
AccII CGCG 1 cut(s) 140
AccIII TCCGGA 1 cut(s) 262
AciI CCGC 1 cut(s) 140
AclWI GGATC 3 cut(s) 181, 194, 343
AcoI YGGCCR 1 cut(s) 730
AcsI RAATTY 1 cut(s) 819
AfaI GTAC 4 cut(s) 89, 106, 366, 647
AfiI CCNNNNNNNGG 4 cut(s) 163, 224, 449, 559
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 5 cut(s) 206, 346, 604, 640, 935
AjuI GAANNNNNNNTTGG 2 cut(s) 146, 178
AluBI AGCT 5 cut(s) 115, 479, 496, 583, 1019
AluI AGCT 5 cut(s) 115, 479, 496, 583, 1019
Alw21I GWGCWC 1 cut(s) 440
Alw26I GTCTC 3 cut(s) 323, 715, 805
AlwI GGATC 3 cut(s) 181, 194, 343
AlwNI CAGNNNCTG 1 cut(s) 479
Ama87I CYCGRG 2 cut(s) 116, 941
Aor13HI TCCGGA 1 cut(s) 262
AoxI GGCC 2 cut(s) 730, 937
ApeKI GCWGC 4 cut(s) 473, 476, 632, 956
ApoI RAATTY 1 cut(s) 819
AspS9I GGNCC 1 cut(s) 950
AsuC2I CCSGG 1 cut(s) 402
AsuHPI GGTGA 3 cut(s) 23, 52, 290
AvaI CYCGRG 2 cut(s) 116, 941
AvaII GGWCC 1 cut(s) 950
BaeI ACNNNNGTAYC 4 cut(s) 88, 121, 348, 381
BalI TGGCCA 1 cut(s) 732
BamHI GGATCC 1 cut(s) 186
BanII GRGCYC 2 cut(s) 134, 972
Bbv12I GWGCWC 1 cut(s) 440
BbvI GCAGC 4 cut(s) 485, 488, 619, 943
BccI CCATC 3 cut(s) 297, 514, 864
BceAI ACGGC 1 cut(s) 725
BcnI CCSGG 1 cut(s) 402
BcoDI GTCTC 3 cut(s) 323, 715, 805
BfaI CTAG 1 cut(s) 584
BfmI CTRYAG 1 cut(s) 471
BfuAI ACCTGC 1 cut(s) 28
BisI GCNGC 4 cut(s) 474, 477, 633, 957
BlsI GCNGC 4 cut(s) 475, 478, 634, 958
Bme1390I CCNGG 1 cut(s) 402
Bme18I GGWCC 1 cut(s) 950
BmeT110I CYCGRG 2 cut(s) 116, 941
BmgT120I GGNCC 1 cut(s) 950
BmiI GGNNCC 2 cut(s) 123, 188
BmrFI CCNGG 1 cut(s) 402
BmsI GCATC 3 cut(s) 268, 619, 691
BpmI CTGGAG 1 cut(s) 999
BpuMI CCSGG 1 cut(s) 402
BsaAI YACGTR 1 cut(s) 91
BsaI GGTCTC 1 cut(s) 715
BsaWI WCCGGW 2 cut(s) 262, 299
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 4 cut(s) 163, 224, 449, 559
Bse1I ACTGG 2 cut(s) 67, 388
BseAI TCCGGA 1 cut(s) 262
BseGI GGATG 3 cut(s) 259, 308, 706
BseLI CCNNNNNNNGG 4 cut(s) 163, 224, 449, 559
BseMII CTCAG 1 cut(s) 147
BseNI ACTGG 2 cut(s) 67, 388
BseRI GAGGAG 1 cut(s) 465
BseXI GCAGC 4 cut(s) 485, 488, 619, 943
Bsh1236I CGCG 1 cut(s) 140
BshFI GGCC 2 cut(s) 732, 939
BsiHKAI GWGCWC 1 cut(s) 440
BsiHKCI CYCGRG 2 cut(s) 116, 941
BsiSI CCGG 4 cut(s) 263, 300, 401, 953
BslFI GGGAC 1 cut(s) 65
BslI CCNNNNNNNGG 4 cut(s) 163, 224, 449, 559
BsmAI GTCTC 3 cut(s) 323, 715, 805
BsmBI CGTCTC 1 cut(s) 805
BsmFI GGGAC 1 cut(s) 65
BsnI GGCC 2 cut(s) 732, 939
Bso31I GGTCTC 1 cut(s) 715
BsoBI CYCGRG 2 cut(s) 116, 941
Bsp1286I GDGCHC 3 cut(s) 134, 440, 972
Bsp13I TCCGGA 1 cut(s) 262
Bsp143I GATC 4 cut(s) 186, 348, 565, 753
BspACI CCGC 1 cut(s) 140
BspANI GGCC 2 cut(s) 732, 939
BspCNI CTCAG 1 cut(s) 146
BspEI TCCGGA 1 cut(s) 262
BspFNI CGCG 1 cut(s) 140
BspLI GGNNCC 2 cut(s) 123, 188
BspMAI CTGCAG 1 cut(s) 475
BspMI ACCTGC 1 cut(s) 28
BspPI GGATC 3 cut(s) 181, 194, 343
BspQI GCTCTTC 1 cut(s) 609
BspTNI GGTCTC 1 cut(s) 715
BsrI ACTGG 2 cut(s) 67, 388
BssMI GATC 4 cut(s) 186, 348, 565, 753
Bst4CI ACNGT 1 cut(s) 101
Bst6I CTCTTC 3 cut(s) 303, 347, 609
BstAPI GCANNNNNTGC 1 cut(s) 482
BstBAI YACGTR 1 cut(s) 91
BstC8I GCNNGC 1 cut(s) 440
BstDEI CTNAG 1 cut(s) 133
BstENI CCTNNNNNAGG 1 cut(s) 447
BstF5I GGATG 3 cut(s) 259, 308, 706
BstFNI CGCG 1 cut(s) 140
BstKTI GATC 4 cut(s) 189, 351, 568, 756
BstMAI GTCTC 3 cut(s) 323, 715, 805
BstMBI GATC 4 cut(s) 186, 348, 565, 753
BstMWI GCNNNNNNNGC 2 cut(s) 482, 502
BstNSI RCATGY 1 cut(s) 88
BstSCI CCNGG 1 cut(s) 400
BstSFI CTRYAG 1 cut(s) 471
BstUI CGCG 1 cut(s) 140
BstV1I GCAGC 4 cut(s) 485, 488, 619, 943
BstX2I RGATCY 2 cut(s) 186, 348
BstXI CCANNNNNNTGG 1 cut(s) 874
BstYI RGATCY 2 cut(s) 186, 348
BsuRI GGCC 2 cut(s) 732, 939
BtsCI GGATG 3 cut(s) 259, 308, 706
BtsIMutI CAGTG 1 cut(s) 357
BveI ACCTGC 1 cut(s) 28
Cac8I GCNNGC 1 cut(s) 440
CaiI CAGNNNCTG 1 cut(s) 479
Cfr13I GGNCC 1 cut(s) 950
Csp6I GTAC 4 cut(s) 88, 105, 365, 646
CviAII CATG 6 cut(s) 85, 428, 620, 718, 728, 880
CviQI GTAC 4 cut(s) 88, 105, 365, 646
DdeI CTNAG 1 cut(s) 133
DpnI GATC 4 cut(s) 188, 350, 567, 755
DpnII GATC 4 cut(s) 186, 348, 565, 753
EaeI YGGCCR 1 cut(s) 730
Eam1104I CTCTTC 3 cut(s) 303, 347, 609
EarI CTCTTC 3 cut(s) 303, 347, 609
Eco147I AGGCCT 1 cut(s) 939
Eco24I GRGCYC 2 cut(s) 134, 972
Eco31I GGTCTC 1 cut(s) 715
Eco47I GGWCC 1 cut(s) 950
Eco88I CYCGRG 2 cut(s) 116, 941
EcoNI CCTNNNNNAGG 1 cut(s) 447
EcoRI GAATTC 1 cut(s) 819
EcoT38I GRGCYC 2 cut(s) 134, 972
Esp3I CGTCTC 1 cut(s) 805
FaeI CATG 6 cut(s) 88, 431, 623, 721, 731, 883
FaqI GGGAC 1 cut(s) 65
FatI CATG 6 cut(s) 84, 427, 619, 717, 727, 879
Fnu4HI GCNGC 4 cut(s) 474, 477, 633, 957
FokI GGATG 3 cut(s) 246, 315, 713
FriOI GRGCYC 2 cut(s) 134, 972
Fsp4HI GCNGC 4 cut(s) 474, 477, 633, 957
FspBI CTAG 1 cut(s) 584
GluI GCNGC 4 cut(s) 474, 477, 633, 957
GsuI CTGGAG 1 cut(s) 999
HaeIII GGCC 2 cut(s) 732, 939
HapII CCGG 4 cut(s) 263, 300, 401, 953
Hin1II CATG 6 cut(s) 88, 431, 623, 721, 731, 883
HinfI GANTC 3 cut(s) 77, 251, 455
HpaII CCGG 4 cut(s) 263, 300, 401, 953
HphI GGTGA 3 cut(s) 23, 52, 290
Hpy188I TCNGA 5 cut(s) 82, 191, 548, 899, 992
Hpy188III TCNNGA 6 cut(s) 151, 263, 346, 676, 920, 943
HpyAV CCTTC 6 cut(s) 200, 269, 553, 719, 824, 929
HpyCH4III ACNGT 1 cut(s) 101
HpyCH4IV ACGT 2 cut(s) 90, 363
HpyCH4V TGCA 3 cut(s) 473, 512, 704
HpyF10VI GCNNNNNNNGC 2 cut(s) 482, 502
HpyF3I CTNAG 1 cut(s) 133
HpySE526I ACGT 2 cut(s) 90, 363
Hsp92II CATG 6 cut(s) 88, 431, 623, 721, 731, 883
Kpn2I TCCGGA 1 cut(s) 262
Kzo9I GATC 4 cut(s) 186, 348, 565, 753
LguI GCTCTTC 1 cut(s) 609
LmnI GCTCC 1 cut(s) 1018
Lsp1109I GCAGC 4 cut(s) 485, 488, 619, 943
LweI GCATC 3 cut(s) 268, 619, 691
MaeI CTAG 1 cut(s) 584
MaeII ACGT 2 cut(s) 90, 363
MaeIII GTNAC 3 cut(s) 91, 170, 278
MalI GATC 4 cut(s) 188, 350, 567, 755
MboI GATC 4 cut(s) 186, 348, 565, 753
MboII GAAGA 4 cut(s) 320, 334, 626, 935
MflI RGATCY 2 cut(s) 186, 348
MhlI GDGCHC 3 cut(s) 134, 440, 972
MlsI TGGCCA 1 cut(s) 732
MluCI AATT 4 cut(s) 201, 506, 604, 819
MluNI TGGCCA 1 cut(s) 732
MlyI GAGTC 1 cut(s) 86
MmeI TCCRAC 4 cut(s) 60, 517, 526, 970
MnlI CCTC 8 cut(s) 7, 21, 112, 177, 443, 589, 735, 950
Mox20I TGGCCA 1 cut(s) 732
MroI TCCGGA 1 cut(s) 262
MscI TGGCCA 1 cut(s) 732
MseI TTAA 2 cut(s) 111, 270
MslI CAYNNNNRTG 1 cut(s) 89
Msp20I TGGCCA 1 cut(s) 732
MspA1I CMGCKG 2 cut(s) 479, 1019
MspI CCGG 4 cut(s) 263, 300, 401, 953
MspR9I CCNGG 1 cut(s) 402
MvnI CGCG 1 cut(s) 140
MwoI GCNNNNNNNGC 2 cut(s) 482, 502
NciI CCSGG 1 cut(s) 402
NdeII GATC 4 cut(s) 186, 348, 565, 753
NlaIII CATG 6 cut(s) 88, 431, 623, 721, 731, 883
NlaIV GGNNCC 2 cut(s) 123, 188
NmuCI GTSAC 3 cut(s) 91, 170, 278
NspI RCATGY 1 cut(s) 88
PaeR7I CTCGAG 2 cut(s) 116, 941
PaqCI CACCTGC 1 cut(s) 28
PceI AGGCCT 1 cut(s) 939
PciI ACATGT 1 cut(s) 84
PciSI GCTCTTC 1 cut(s) 609
PcsI WCGNNNNNNNCGW 1 cut(s) 843
PfeI GAWTC 2 cut(s) 251, 455
PflMI CCANNNNNTGG 1 cut(s) 224
PkrI GCNGC 4 cut(s) 475, 478, 634, 958
PleI GAGTC 1 cut(s) 85
PpsI GAGTC 1 cut(s) 85
Ppu21I YACGTR 1 cut(s) 91
PscI ACATGT 1 cut(s) 84
PsiI TTATAA 2 cut(s) 213, 609
PspN4I GGNNCC 2 cut(s) 123, 188
PspPI GGNCC 1 cut(s) 950
PspXI VCTCGAGB 1 cut(s) 116
PstI CTGCAG 1 cut(s) 475
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 2 cut(s) 186, 348
PvuII CAGCTG 2 cut(s) 479, 1019
RsaI GTAC 4 cut(s) 89, 106, 366, 647
RsaNI GTAC 4 cut(s) 88, 105, 365, 646
RseI CAYNNNNRTG 1 cut(s) 89
SapI GCTCTTC 1 cut(s) 609
SaqAI TTAA 2 cut(s) 111, 270
SatI GCNGC 4 cut(s) 474, 477, 633, 957
Sau3AI GATC 4 cut(s) 186, 348, 565, 753
Sau96I GGNCC 1 cut(s) 950
SchI GAGTC 1 cut(s) 86
ScrFI CCNGG 1 cut(s) 402
SduI GDGCHC 3 cut(s) 134, 440, 972
SfaNI GCATC 3 cut(s) 268, 619, 691
SfcI CTRYAG 1 cut(s) 471
Sfr274I CTCGAG 2 cut(s) 116, 941
SinI GGWCC 1 cut(s) 950
SlaI CTCGAG 2 cut(s) 116, 941
SmiMI CAYNNNNRTG 1 cut(s) 89
SmlI CTYRAG 2 cut(s) 116, 941
SmoI CTYRAG 2 cut(s) 116, 941
Sse9I AATT 4 cut(s) 201, 506, 604, 819
SseBI AGGCCT 1 cut(s) 939
SsiI CCGC 1 cut(s) 140
SspMI CTAG 1 cut(s) 584
StuI AGGCCT 1 cut(s) 939
StyD4I CCNGG 1 cut(s) 400
TaaI ACNGT 1 cut(s) 101
TaiI ACGT 2 cut(s) 93, 366
TaqI TCGA 6 cut(s) 117, 564, 675, 817, 846, 942
TasI AATT 4 cut(s) 201, 506, 604, 819
TfiI GAWTC 2 cut(s) 251, 455
Tru1I TTAA 2 cut(s) 111, 270
Tru9I TTAA 2 cut(s) 111, 270
TscAI CASTG 1 cut(s) 364
TseFI GTSAC 3 cut(s) 91, 170, 278
TseI GCWGC 4 cut(s) 473, 476, 632, 956
Tsp45I GTSAC 3 cut(s) 91, 170, 278
TspDTI ATGAA 1 cut(s) 444
TspRI CASTG 1 cut(s) 364
Van91I CCANNNNNTGG 1 cut(s) 224
VpaK11BI GGWCC 1 cut(s) 950
XagI CCTNNNNNAGG 1 cut(s) 447
XapI RAATTY 1 cut(s) 819
XceI RCATGY 1 cut(s) 88
XhoI CTCGAG 2 cut(s) 116, 941
XspI CTAG 1 cut(s) 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.