Rorug01G0459700

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
55336994 .. 55341591
4598 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0459700.1

Sequence Viewer

Length: 1050 bp
ATGATATGCAAGAGTGGGATAAGGAGTCTGATTGTTCAAGCTGGGAATATAGTAGCGTGCACAAAAACTGGGGCGTATTTGAACAACATTGGGAGAGTTTGCATGCAAACATCTTTGGGGAACTGCGAATTTAAGACAACGTGTTTAAGGATGATGGTTGATTCTAGTGCGACCGAGAAACAGGGTTCCATTGTTGATGTCTTATCGCAGAAAGATGACGAGGGTGGATATATCAGTGGAGGCTGGAAAAGTGAAGGCGGAAAACTTAGCTGTGGCTATTCCAGTTTTAGGGGAAAAAGAGCCACCATGGAGGATTTTTATGATATAAAAACTTCCAAGATTGATGGGCAAACAGTTTGCCTCTTTGGAATTTTTGATGGTCATGGTGGTTCTCGCGCTGCTGAATATCTGAAGGAGCATCTATTTGAGAATCTCATGAAGCATCCAAACTTTATAACAGACACCAAGTTAGCTATTAGTGAATCATATCAACAAACTGATGCAGCTTTTTTGGATTCTGAAAGGGATACATACCGCGATGATGGTTCTACTGCTTCAACAGCAGTCTTAGTGGGCAACCATCTATACGTTGCCAATGTTGGAGATTCTCGTACAGTAATATCAAAGGCAGGCAAAGCAATTCCTCTATCTGAGGATCATAAACCAAATCGAACTGATGAGAGAAAGAGAATTGAAAATGCTGGGGGCATTGTAATGTGGGCAGGAACTTGGAGGGTAGGAGGTGTTTTGGCTATGTCTCGGGCTTTTGGAAACCGCATGTTGAAGCAATTTGTTGTTGCAGAACCTGAGATCCAGGACCAAGTGATAGATGAAGAATTTGAATTGCTGGTGCTCGCTAGTGATGGGCTGTGGGACGTGGTGCCAAATGAGGATGCTGTTTCACTTGCCCGAACAGAAGAAGAACCCGAGGCGGCAGCTCGGAAGTTAATTGGAACAGCATTTGCCCGTGGTAGTGCAGACAATATAACATCCATTGTGGTGAGGTTCCACCATGACAAAGCAGAGTCTGCTGGGGCTAACCATGATTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

349

Amino Acids

38.03

Weight (kDa)

5.39

Isoelectric Point (pI)

35.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 91 - 329 1.6e-64 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 455
AccB1I GGYRCC 1 cut(s) 880
AccII CGCG 2 cut(s) 396, 537
AciI CCGC 4 cut(s) 258, 535, 775, 932
AclWI GGATC 2 cut(s) 663, 805
AcsI RAATTY 3 cut(s) 128, 369, 836
AcuI CTGAAG 1 cut(s) 431
AfaI GTAC 1 cut(s) 613
AfiI CCNNNNNNNGG 1 cut(s) 288
AflIII ACRYGT 1 cut(s) 140
AgsI TTSAA 6 cut(s) 38, 82, 558, 695, 784, 842
AjiI CACGTC 1 cut(s) 877
AjnI CCWGG 1 cut(s) 813
AloI GAACNNNNNNTCC 2 cut(s) 795, 827
AluBI AGCT 5 cut(s) 41, 270, 473, 506, 938
AluI AGCT 5 cut(s) 41, 270, 473, 506, 938
Alw21I GWGCWC 2 cut(s) 62, 855
Alw26I GTCTC 1 cut(s) 762
Alw44I GTGCAC 1 cut(s) 58
AlwI GGATC 2 cut(s) 663, 805
AlwNI CAGNNNCTG 2 cut(s) 806, 1028
Ama87I CYCGRG 2 cut(s) 759, 926
ApaLI GTGCAC 1 cut(s) 58
ApeKI GCWGC 3 cut(s) 398, 503, 935
ApoI RAATTY 3 cut(s) 128, 369, 836
AspLEI GCGC 1 cut(s) 398
AspS9I GGNCC 1 cut(s) 817
AsuHPI GGTGA 1 cut(s) 1012
AvaI CYCGRG 2 cut(s) 759, 926
AvaII GGWCC 1 cut(s) 817
BaeGI GKGCMC 1 cut(s) 62
BanI GGYRCC 1 cut(s) 880
Bbv12I GWGCWC 2 cut(s) 62, 855
BbvI GCAGC 3 cut(s) 385, 515, 947
BccI CCATC 6 cut(s) 148, 338, 371, 536, 588, 857
BciT130I CCWGG 1 cut(s) 815
BciVI GTATCC 1 cut(s) 520
BcoDI GTCTC 1 cut(s) 762
BfaI CTAG 2 cut(s) 165, 858
BfuI GTATCC 1 cut(s) 520
BisI GCNGC 4 cut(s) 399, 504, 933, 936
BlsI GCNGC 4 cut(s) 400, 505, 934, 937
Bme1390I CCNGG 1 cut(s) 815
Bme18I GGWCC 1 cut(s) 817
BmeT110I CYCGRG 2 cut(s) 759, 926
BmgBI CACGTC 1 cut(s) 877
BmgT120I GGNCC 1 cut(s) 817
BmiI GGNNCC 3 cut(s) 187, 882, 1007
BmrFI CCNGG 1 cut(s) 815
BmrI ACTGGG 1 cut(s) 78
BmsI GCATC 4 cut(s) 427, 451, 490, 883
BmuI ACTGGG 1 cut(s) 78
BsaJI CCNNGG 3 cut(s) 306, 927, 967
Bsc4I CCNNNNNNNGG 1 cut(s) 288
Bse1I ACTGG 2 cut(s) 73, 282
BseBI CCWGG 1 cut(s) 815
BseDI CCNNGG 3 cut(s) 306, 927, 967
BseGI GGATG 4 cut(s) 156, 442, 898, 989
BseLI CCNNNNNNNGG 1 cut(s) 288
BseMII CTCAG 2 cut(s) 642, 798
BseNI ACTGG 2 cut(s) 73, 282
BseSI GKGCMC 1 cut(s) 62
BseXI GCAGC 3 cut(s) 385, 515, 947
BseYI CCCAGC 3 cut(s) 41, 701, 1031
BsgI GTGCAG 1 cut(s) 996
Bsh1236I CGCG 2 cut(s) 396, 537
Bsh1285I CGRYCG 1 cut(s) 174
BshNI GGYRCC 1 cut(s) 880
BsiEI CGRYCG 1 cut(s) 174
BsiHKAI GWGCWC 2 cut(s) 62, 855
BsiHKCI CYCGRG 2 cut(s) 759, 926
BslFI GGGAC 1 cut(s) 887
BslI CCNNNNNNNGG 1 cut(s) 288
BsmAI GTCTC 1 cut(s) 762
BsmFI GGGAC 1 cut(s) 887
BsoBI CYCGRG 2 cut(s) 759, 926
Bsp1286I GDGCHC 2 cut(s) 62, 855
Bsp143I GATC 2 cut(s) 655, 810
Bsp19I CCATGG 1 cut(s) 306
BspACI CCGC 4 cut(s) 258, 535, 775, 932
BspCNI CTCAG 2 cut(s) 643, 799
BspFNI CGCG 2 cut(s) 396, 537
BspHI TCATGA 1 cut(s) 435
BspLI GGNNCC 3 cut(s) 187, 882, 1007
BspPI GGATC 2 cut(s) 663, 805
BspT107I GGYRCC 1 cut(s) 880
BsrI ACTGG 2 cut(s) 73, 282
BssECI CCNNGG 3 cut(s) 306, 927, 967
BssMI GATC 2 cut(s) 655, 810
BssT1I CCWWGG 1 cut(s) 306
Bst2UI CCWGG 1 cut(s) 815
Bst4CI ACNGT 2 cut(s) 355, 616
BstAPI GCANNNNNTGC 1 cut(s) 1028
BstC8I GCNNGC 4 cut(s) 58, 104, 631, 855
BstDEI CTNAG 4 cut(s) 266, 568, 651, 807
BstDSI CCRYGG 2 cut(s) 306, 967
BstF5I GGATG 4 cut(s) 156, 442, 898, 989
BstFNI CGCG 2 cut(s) 396, 537
BstHHI GCGC 1 cut(s) 398
BstKTI GATC 2 cut(s) 658, 813
BstMAI GTCTC 1 cut(s) 762
BstMBI GATC 2 cut(s) 655, 810
BstMCI CGRYCG 1 cut(s) 174
BstMWI GCNNNNNNNGC 3 cut(s) 560, 635, 1028
BstNI CCWGG 1 cut(s) 815
BstNSI RCATGY 2 cut(s) 106, 781
BstSCI CCNGG 1 cut(s) 813
BstSLI GKGCMC 1 cut(s) 62
BstUI CGCG 2 cut(s) 396, 537
BstV1I GCAGC 3 cut(s) 385, 515, 947
BstX2I RGATCY 1 cut(s) 810
BstYI RGATCY 1 cut(s) 810
BsuI GTATCC 1 cut(s) 520
BtgI CCRYGG 2 cut(s) 306, 967
BtgZI GCGATG 1 cut(s) 552
BtrI CACGTC 1 cut(s) 877
BtsCI GGATG 4 cut(s) 156, 442, 898, 989
BtsIMutI CAGTG 1 cut(s) 241
Cac8I GCNNGC 4 cut(s) 58, 104, 631, 855
CaiI CAGNNNCTG 2 cut(s) 806, 1028
CciI TCATGA 1 cut(s) 435
CfoI GCGC 1 cut(s) 398
Cfr13I GGNCC 1 cut(s) 817
Csp6I GTAC 1 cut(s) 612
CviAII CATG 7 cut(s) 103, 307, 383, 436, 778, 1013, 1043
CviQI GTAC 1 cut(s) 612
DdeI CTNAG 4 cut(s) 266, 568, 651, 807
DpnI GATC 2 cut(s) 657, 812
DpnII GATC 2 cut(s) 655, 810
EciI GGCGGA 1 cut(s) 273
Eco130I CCWWGG 1 cut(s) 306
Eco47I GGWCC 1 cut(s) 817
Eco57I CTGAAG 1 cut(s) 431
Eco88I CYCGRG 2 cut(s) 759, 926
EcoRII CCWGG 1 cut(s) 813
EcoT14I CCWWGG 1 cut(s) 306
ErhI CCWWGG 1 cut(s) 306
FaeI CATG 7 cut(s) 106, 310, 386, 439, 781, 1016, 1046
FaqI GGGAC 1 cut(s) 887
FatI CATG 7 cut(s) 102, 306, 382, 435, 777, 1012, 1042
Fnu4HI GCNGC 4 cut(s) 399, 504, 933, 936
FokI GGATG 4 cut(s) 163, 429, 905, 976
Fsp4HI GCNGC 4 cut(s) 399, 504, 933, 936
FspBI CTAG 2 cut(s) 165, 858
GlaI GCGC 1 cut(s) 397
GluI GCNGC 4 cut(s) 399, 504, 933, 936
GsaI CCCAGC 3 cut(s) 45, 705, 1035
HhaI GCGC 1 cut(s) 398
Hin1II CATG 7 cut(s) 106, 310, 386, 439, 781, 1016, 1046
Hin6I GCGC 1 cut(s) 396
HinP1I GCGC 1 cut(s) 396
HinfI GANTC 7 cut(s) 25, 161, 430, 482, 515, 605, 1025
HphI GGTGA 1 cut(s) 1012
Hpy166II GTNNAC 1 cut(s) 60
Hpy188I TCNGA 5 cut(s) 30, 411, 520, 652, 942
Hpy188III TCNNGA 1 cut(s) 436
Hpy8I GTNNAC 1 cut(s) 60
HpyAV CCTTC 2 cut(s) 248, 406
HpyCH4III ACNGT 2 cut(s) 355, 616
HpyCH4IV ACGT 3 cut(s) 140, 588, 876
HpyCH4V TGCA 7 cut(s) 9, 60, 102, 106, 503, 800, 977
HpyF10VI GCNNNNNNNGC 3 cut(s) 560, 635, 1028
HpyF3I CTNAG 4 cut(s) 266, 568, 651, 807
HpySE526I ACGT 3 cut(s) 140, 588, 876
Hsp92II CATG 7 cut(s) 106, 310, 386, 439, 781, 1016, 1046
HspAI GCGC 1 cut(s) 396
Kzo9I GATC 2 cut(s) 655, 810
LmnI GCTCC 1 cut(s) 415
Lsp1109I GCAGC 3 cut(s) 385, 515, 947
LweI GCATC 4 cut(s) 427, 451, 490, 883
MaeI CTAG 2 cut(s) 165, 858
MaeII ACGT 3 cut(s) 140, 588, 876
MalI GATC 2 cut(s) 657, 812
MboI GATC 2 cut(s) 655, 810
MboII GAAGA 3 cut(s) 845, 929, 932
MflI RGATCY 1 cut(s) 810
MhlI GDGCHC 2 cut(s) 62, 855
MluCI AATT 8 cut(s) 128, 369, 639, 690, 788, 836, 842, 948
MlyI GAGTC 2 cut(s) 34, 1034
MmeI TCCRAC 1 cut(s) 580
MseI TTAA 3 cut(s) 132, 146, 947
MslI CAYNNNNRTG 2 cut(s) 713, 998
MspR9I CCNGG 1 cut(s) 815
MvaI CCWGG 1 cut(s) 815
MvnI CGCG 2 cut(s) 396, 537
MwoI GCNNNNNNNGC 3 cut(s) 560, 635, 1028
NcoI CCATGG 1 cut(s) 306
NdeII GATC 2 cut(s) 655, 810
NlaIII CATG 7 cut(s) 106, 310, 386, 439, 781, 1016, 1046
NlaIV GGNNCC 3 cut(s) 187, 882, 1007
NspI RCATGY 2 cut(s) 106, 781
PaeI GCATGC 1 cut(s) 106
PagI TCATGA 1 cut(s) 435
PfeI GAWTC 5 cut(s) 161, 430, 482, 515, 605
PfoI TCCNGGA 1 cut(s) 813
PkrI GCNGC 4 cut(s) 400, 505, 934, 937
PleI GAGTC 2 cut(s) 33, 1033
PpsI GAGTC 2 cut(s) 33, 1033
PsiI TTATAA 1 cut(s) 455
Psp6I CCWGG 1 cut(s) 813
PspFI CCCAGC 3 cut(s) 41, 701, 1031
PspGI CCWGG 1 cut(s) 813
PspN4I GGNNCC 3 cut(s) 187, 882, 1007
PspPI GGNCC 1 cut(s) 817
PstNI CAGNNNCTG 2 cut(s) 806, 1028
PsuI RGATCY 1 cut(s) 810
RsaI GTAC 1 cut(s) 613
RsaNI GTAC 1 cut(s) 612
RseI CAYNNNNRTG 2 cut(s) 713, 998
SaqAI TTAA 3 cut(s) 132, 146, 947
SatI GCNGC 4 cut(s) 399, 504, 933, 936
Sau3AI GATC 2 cut(s) 655, 810
Sau96I GGNCC 1 cut(s) 817
SchI GAGTC 2 cut(s) 34, 1034
ScrFI CCNGG 1 cut(s) 815
SduI GDGCHC 2 cut(s) 62, 855
SfaNI GCATC 4 cut(s) 427, 451, 490, 883
SinI GGWCC 1 cut(s) 817
SmiMI CAYNNNNRTG 2 cut(s) 713, 998
SphI GCATGC 1 cut(s) 106
Sse9I AATT 8 cut(s) 128, 369, 639, 690, 788, 836, 842, 948
SsiI CCGC 4 cut(s) 258, 535, 775, 932
SspMI CTAG 2 cut(s) 165, 858
StyD4I CCNGG 1 cut(s) 813
StyI CCWWGG 1 cut(s) 306
TaaI ACNGT 2 cut(s) 355, 616
TaiI ACGT 3 cut(s) 143, 591, 879
TaqI TCGA 1 cut(s) 670
TaqII GACCGA 1 cut(s) 188
TasI AATT 8 cut(s) 128, 369, 639, 690, 788, 836, 842, 948
TauI GCSGC 1 cut(s) 935
TfiI GAWTC 5 cut(s) 161, 430, 482, 515, 605
Tru1I TTAA 3 cut(s) 132, 146, 947
Tru9I TTAA 3 cut(s) 132, 146, 947
TscAI CASTG 1 cut(s) 241
TseI GCWGC 3 cut(s) 398, 503, 935
TspDTI ATGAA 2 cut(s) 452, 846
TspRI CASTG 1 cut(s) 241
VneI GTGCAC 1 cut(s) 58
VpaK11BI GGWCC 1 cut(s) 817
XapI RAATTY 3 cut(s) 128, 369, 836
XceI RCATGY 2 cut(s) 106, 781
XspI CTAG 2 cut(s) 165, 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.