RLG00000015637

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000196
Physical Location & Seq
Forward (+)
322913 .. 324420
1508 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015637

Sequence Viewer

Length: 813 bp
ATGGAGGAAGTGAGTAACAAGCAGGTGTTAATGAAGGAGCATCTTACGAGTAGGAATCCTAAAGAGTCACATTATGTGGCCACCACTAAAACCAAGTTGAAGCTTCCGGAGGGTGCCACCGGGGTTGGTTCTGCTCGTATGAAGAAGATTGAAGCTTCCTCTTATACCGTTGACATGTACAAACCTGATCAGCGACTAAGTGGATATGGAGTGGCAAAAGTTTTAGACTCTGCGCATCCAAACTTCACGAAAGGGGACTTGGTTTGGGGTTTTACTGGATGTATGCCTGGTACGACTGCTTATGCTGATTTCTATGAGGTTTGCAATCCTAAGCCGGGTGAGAGACTGTTGGGTTGCTATGTTGTTGGCAATGCTGGAACCAAAGACAAGGTGGATCTATTGAAGAACAAGTTCGGATTCAATGATACTTTTAAGTGCTTTCCGGAAGGTATTGACATATACTTTGAGAGTGTTGGAGGAAAGATGCTTGATGTAGTGCTACTCAATATGAGGTTCTGCGGACGGATTGCTGCTTCTGGGATGATCTCACAGTTCAGCGGTGGCCACACCGAAGGCGTTCAAAACTTGATGTACAGGATTGGGAATCGGGTGCGCATGGAGGGATTCATAGTCGCTGATCACTTTCACCTCTATCCAAAGCATCTTGAATTGGTGATACCTTACATCAAAGAAGGCAAAATAGTGTCTTTGGAAGACGTGGCTGAGGGCATTGACAATCCTCCCGCTGCTCTCATAGGCCTCTTCGCCGGACGGGACGTTGGAAAGCAACTTGTTTTAGTTTCCCGCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

271

Amino Acids

29.76

Weight (kDa)

8.16

Isoelectric Point (pI)

19.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 46 - 95 1.8e-06 N-terminal domain of oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
Acc16I TGCGCA 2 cut(s) 234, 614
Acc36I ACCTGC 1 cut(s) 13
AccB1I GGYRCC 1 cut(s) 113
AccII CGCG 1 cut(s) 807
AccIII TCCGGA 2 cut(s) 106, 442
AciI CCGC 4 cut(s) 519, 558, 744, 805
AclWI GGATC 1 cut(s) 402
AcoI YGGCCR 2 cut(s) 78, 562
AfaI GTAC 3 cut(s) 179, 292, 593
AfiI CCNNNNNNNGG 1 cut(s) 335
AflIII ACRYGT 1 cut(s) 174
AgsI TTSAA 6 cut(s) 100, 152, 403, 421, 581, 668
AjiI CACGTC 1 cut(s) 718
AjnI CCWGG 1 cut(s) 286
AjuI GAANNNNNNNTTGG 2 cut(s) 242, 274
AluBI AGCT 2 cut(s) 103, 155
AluI AGCT 2 cut(s) 103, 155
Alw26I GTCTC 1 cut(s) 337
AlwI GGATC 1 cut(s) 402
Aor13HI TCCGGA 2 cut(s) 106, 442
AoxI GGCC 3 cut(s) 78, 562, 757
ApeKI GCWGC 2 cut(s) 530, 746
ArsI GACNNNNNNTTYG 2 cut(s) 446, 478
Asp700I GAANNNNTTC 2 cut(s) 410, 576
AspLEI GCGC 2 cut(s) 235, 615
AsuC2I CCSGG 2 cut(s) 121, 336
AsuHPI GGTGA 3 cut(s) 350, 638, 685
BalI TGGCCA 2 cut(s) 80, 564
BanI GGYRCC 1 cut(s) 113
BbsI GAAGAC 1 cut(s) 720
BbvCI CCTCAGC 1 cut(s) 723
BbvI GCAGC 2 cut(s) 517, 733
BciT130I CCWGG 1 cut(s) 288
BclI TGATCA 2 cut(s) 187, 637
BcnI CCSGG 2 cut(s) 121, 336
BcoDI GTCTC 1 cut(s) 337
BfuAI ACCTGC 1 cut(s) 13
BisI GCNGC 2 cut(s) 531, 747
BlsI GCNGC 2 cut(s) 532, 748
Bme1390I CCNGG 3 cut(s) 121, 288, 336
BmgBI CACGTC 1 cut(s) 718
BmiI GGNNCC 2 cut(s) 115, 379
BmrFI CCNGG 3 cut(s) 121, 288, 336
BmsI GCATC 4 cut(s) 49, 244, 474, 670
BpiI GAAGAC 1 cut(s) 720
Bpu10I CCTNAGC 2 cut(s) 330, 723
BpuMI CCSGG 2 cut(s) 121, 336
BsaJI CCNNGG 1 cut(s) 120
BsaWI WCCGGW 2 cut(s) 106, 442
Bsc4I CCNNNNNNNGG 1 cut(s) 335
Bse1I ACTGG 1 cut(s) 280
Bse3DI GCAATG 1 cut(s) 376
BseAI TCCGGA 2 cut(s) 106, 442
BseBI CCWGG 1 cut(s) 288
BseDI CCNNGG 1 cut(s) 120
BseGI GGATG 3 cut(s) 235, 284, 546
BseLI CCNNNNNNNGG 1 cut(s) 335
BseMI GCAATG 1 cut(s) 376
BseMII CTCAG 1 cut(s) 714
BseNI ACTGG 1 cut(s) 280
BseXI GCAGC 2 cut(s) 517, 733
Bsh1236I CGCG 1 cut(s) 807
BshFI GGCC 3 cut(s) 80, 564, 759
BshNI GGYRCC 1 cut(s) 113
BsiSI CCGG 5 cut(s) 107, 120, 335, 443, 768
BslFI GGGAC 2 cut(s) 269, 788
BslI CCNNNNNNNGG 1 cut(s) 335
BsmAI GTCTC 1 cut(s) 337
BsmFI GGGAC 2 cut(s) 269, 788
BsnI GGCC 3 cut(s) 80, 564, 759
Bsp13I TCCGGA 2 cut(s) 106, 442
Bsp1407I TGTACA 2 cut(s) 177, 591
Bsp143I GATC 4 cut(s) 187, 394, 543, 637
BspACI CCGC 4 cut(s) 519, 558, 744, 805
BspANI GGCC 3 cut(s) 80, 564, 759
BspCNI CTCAG 1 cut(s) 715
BspEI TCCGGA 2 cut(s) 106, 442
BspFNI CGCG 1 cut(s) 807
BspLI GGNNCC 2 cut(s) 115, 379
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 1 cut(s) 402
BspT107I GGYRCC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 376
BsrGI TGTACA 2 cut(s) 177, 591
BsrI ACTGG 1 cut(s) 280
BssECI CCNNGG 1 cut(s) 120
BssMI GATC 4 cut(s) 187, 394, 543, 637
Bst2UI CCWGG 1 cut(s) 288
Bst4CI ACNGT 3 cut(s) 169, 348, 552
Bst6I CTCTTC 1 cut(s) 767
BstAUI TGTACA 2 cut(s) 177, 591
BstDEI CTNAG 3 cut(s) 197, 330, 723
BstF5I GGATG 3 cut(s) 235, 284, 546
BstFNI CGCG 1 cut(s) 807
BstHHI GCGC 2 cut(s) 235, 615
BstKTI GATC 4 cut(s) 190, 397, 546, 640
BstMAI GTCTC 1 cut(s) 337
BstMBI GATC 4 cut(s) 187, 394, 543, 637
BstNI CCWGG 1 cut(s) 288
BstNSI RCATGY 1 cut(s) 178
BstSCI CCNGG 3 cut(s) 119, 286, 334
BstUI CGCG 1 cut(s) 807
BstV1I GCAGC 2 cut(s) 517, 733
BstV2I GAAGAC 1 cut(s) 720
BstX2I RGATCY 1 cut(s) 394
BstYI RGATCY 1 cut(s) 394
BsuRI GGCC 3 cut(s) 80, 564, 759
BtrI CACGTC 1 cut(s) 718
BtsCI GGATG 3 cut(s) 235, 284, 546
BveI ACCTGC 1 cut(s) 13
CfoI GCGC 2 cut(s) 235, 615
Csp6I GTAC 3 cut(s) 178, 291, 592
CspCI CAANNNNNGTGG 2 cut(s) 106, 141
CviAII CATG 2 cut(s) 175, 616
CviJI RGCY 7 cut(s) 80, 103, 155, 334, 564, 722, 759
CviKI_1 RGCY 7 cut(s) 80, 103, 155, 334, 564, 722, 759
CviQI GTAC 3 cut(s) 178, 291, 592
DdeI CTNAG 3 cut(s) 197, 330, 723
DpnI GATC 4 cut(s) 189, 396, 545, 639
DpnII GATC 4 cut(s) 187, 394, 543, 637
EaeI YGGCCR 2 cut(s) 78, 562
Eam1104I CTCTTC 1 cut(s) 767
EarI CTCTTC 1 cut(s) 767
Eco147I AGGCCT 1 cut(s) 759
EcoRII CCWGG 1 cut(s) 286
FaeI CATG 2 cut(s) 178, 619
FaqI GGGAC 2 cut(s) 269, 788
FatI CATG 2 cut(s) 174, 615
FauI CCCGC 1 cut(s) 751
FbaI TGATCA 2 cut(s) 187, 637
Fnu4HI GCNGC 2 cut(s) 531, 747
FokI GGATG 3 cut(s) 222, 291, 553
Fsp4HI GCNGC 2 cut(s) 531, 747
FspAI RTGCGCAY 1 cut(s) 614
FspI TGCGCA 2 cut(s) 234, 614
GlaI GCGC 2 cut(s) 234, 614
GluI GCNGC 2 cut(s) 531, 747
HaeIII GGCC 3 cut(s) 80, 564, 759
HapII CCGG 5 cut(s) 107, 120, 335, 443, 768
HhaI GCGC 2 cut(s) 235, 615
Hin1II CATG 2 cut(s) 178, 619
Hin6I GCGC 2 cut(s) 233, 613
HinP1I GCGC 2 cut(s) 233, 613
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HindIII AAGCTT 2 cut(s) 101, 153
HinfI GANTC 6 cut(s) 55, 65, 227, 417, 604, 624
HpaII CCGG 5 cut(s) 107, 120, 335, 443, 768
HphI GGTGA 3 cut(s) 350, 638, 685
Hpy166II GTNNAC 1 cut(s) 172
Hpy188I TCNGA 1 cut(s) 416
Hpy188III TCNNGA 4 cut(s) 107, 247, 443, 665
Hpy8I GTNNAC 1 cut(s) 172
HpyAV CCTTC 4 cut(s) 28, 440, 566, 686
HpyCH4III ACNGT 3 cut(s) 169, 348, 552
HpyCH4IV ACGT 2 cut(s) 717, 777
HpyCH4V TGCA 1 cut(s) 324
HpyF3I CTNAG 3 cut(s) 197, 330, 723
HpySE526I ACGT 2 cut(s) 717, 777
Hsp92II CATG 2 cut(s) 178, 619
HspAI GCGC 2 cut(s) 233, 613
Kpn2I TCCGGA 2 cut(s) 106, 442
Ksp22I TGATCA 2 cut(s) 187, 637
Kzo9I GATC 4 cut(s) 187, 394, 543, 637
LmnI GCTCC 1 cut(s) 37
Lsp1109I GCAGC 2 cut(s) 517, 733
LweI GCATC 4 cut(s) 49, 244, 474, 670
MaeII ACGT 2 cut(s) 717, 777
MaeIII GTNAC 2 cut(s) 14, 66
MalI GATC 4 cut(s) 189, 396, 545, 639
MboI GATC 4 cut(s) 187, 394, 543, 637
MboII GAAGA 5 cut(s) 154, 157, 415, 725, 754
MflI RGATCY 1 cut(s) 394
MlsI TGGCCA 2 cut(s) 80, 564
MluCI AATT 1 cut(s) 668
MluNI TGGCCA 2 cut(s) 80, 564
MlyI GAGTC 2 cut(s) 74, 221
MmeI TCCRAC 2 cut(s) 454, 760
Mox20I TGGCCA 2 cut(s) 80, 564
MroI TCCGGA 2 cut(s) 106, 442
MroXI GAANNNNTTC 2 cut(s) 410, 576
MscI TGGCCA 2 cut(s) 80, 564
MseI TTAA 2 cut(s) 29, 432
Msp20I TGGCCA 2 cut(s) 80, 564
MspA1I CMGCKG 2 cut(s) 558, 746
MspI CCGG 5 cut(s) 107, 120, 335, 443, 768
MspR9I CCNGG 3 cut(s) 121, 288, 336
MvaI CCWGG 1 cut(s) 288
MvnI CGCG 1 cut(s) 807
NciI CCSGG 2 cut(s) 121, 336
NdeII GATC 4 cut(s) 187, 394, 543, 637
NlaIII CATG 2 cut(s) 178, 619
NlaIV GGNNCC 2 cut(s) 115, 379
NmuCI GTSAC 1 cut(s) 66
NsbI TGCGCA 2 cut(s) 234, 614
NspI RCATGY 1 cut(s) 178
PaqCI CACCTGC 1 cut(s) 13
PceI AGGCCT 1 cut(s) 759
PciI ACATGT 1 cut(s) 174
PdmI GAANNNNTTC 2 cut(s) 410, 576
PfeI GAWTC 4 cut(s) 55, 417, 604, 624
PkrI GCNGC 2 cut(s) 532, 748
PleI GAGTC 2 cut(s) 73, 221
PpsI GAGTC 2 cut(s) 73, 221
PscI ACATGT 1 cut(s) 174
Psp6I CCWGG 1 cut(s) 286
PspGI CCWGG 1 cut(s) 286
PspN4I GGNNCC 2 cut(s) 115, 379
PsuI RGATCY 1 cut(s) 394
RsaI GTAC 3 cut(s) 179, 292, 593
RsaNI GTAC 3 cut(s) 178, 291, 592
SaqAI TTAA 2 cut(s) 29, 432
SatI GCNGC 2 cut(s) 531, 747
Sau3AI GATC 4 cut(s) 187, 394, 543, 637
SchI GAGTC 2 cut(s) 74, 221
ScrFI CCNGG 3 cut(s) 121, 288, 336
SfaNI GCATC 4 cut(s) 49, 244, 474, 670
Sse9I AATT 1 cut(s) 668
SseBI AGGCCT 1 cut(s) 759
SsiI CCGC 4 cut(s) 519, 558, 744, 805
StuI AGGCCT 1 cut(s) 759
StyD4I CCNGG 3 cut(s) 119, 286, 334
TaaI ACNGT 3 cut(s) 169, 348, 552
TaiI ACGT 2 cut(s) 720, 780
TasI AATT 1 cut(s) 668
TatI WGTACW 2 cut(s) 177, 591
TfiI GAWTC 4 cut(s) 55, 417, 604, 624
Tru1I TTAA 2 cut(s) 29, 432
Tru9I TTAA 2 cut(s) 29, 432
TseFI GTSAC 1 cut(s) 66
TseI GCWGC 2 cut(s) 530, 746
Tsp45I GTSAC 1 cut(s) 66
TspDTI ATGAA 3 cut(s) 47, 155, 616
TspGWI ACGGA 1 cut(s) 538
XceI RCATGY 1 cut(s) 178
XcmI CCANNNNNNNNNTGG 1 cut(s) 388
XmnI GAANNNNTTC 2 cut(s) 410, 576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.