RLG00000030145

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
56370559 .. 56371238
680 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030145

Sequence Viewer

Length: 438 bp
ATGCCTGGAATTACTGCTTATGCTGGTCTTTATGAGCTTTGCTCACCTAAGAAAGGAGAGATGGTCTATGTTTCAGCAGCATCTGGAGCAGTAGGTCAACAAGTTGGCCAGTTTGCCAAACCCATGGGTTGCTATGTTGTCAGAAGTGTTGGAAGTAAAGAAAAGGTGATCCAACAAGTTCGGTTTGACGAGGATTTCAATTATAAAGAAGAATCTAACTTGGATGCAGCTTTGAAAAGGTACTTTCCTGAAGGTATCGATATATACTTTGAGAATGTTGGGGGAAAGATGCTTGATGCCGTGCTACTAAACATGAGATTCCGTGGCCAAGTTGCAGTTTGCGGGATGATCTCACAGTACAACCTTGAGAAGCCTGAAGGTGTACATAATGTCTCTGATCTCCAAAGAGGTTCGGATGCAATGTTTTGTTGCTTTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

146

Amino Acids

16.05

Weight (kDa)

5.43

Isoelectric Point (pI)

28.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_zinc_N PF00107 30 - 119 1e-13 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 204
AciI CCGC 1 cut(s) 342
AclWI GGATC 1 cut(s) 163
AcoI YGGCCR 2 cut(s) 106, 325
AcuI CTGAAG 2 cut(s) 270, 396
AfaI GTAC 3 cut(s) 242, 359, 384
AfiI CCNNNNNNNGG 1 cut(s) 53
AgsI TTSAA 2 cut(s) 199, 235
AjnI CCWGG 1 cut(s) 4
AluBI AGCT 2 cut(s) 37, 230
AluI AGCT 2 cut(s) 37, 230
Alw26I GTCTC 1 cut(s) 397
AlwI GGATC 1 cut(s) 163
AlwNI CAGNNNCTG 1 cut(s) 83
AoxI GGCC 2 cut(s) 106, 325
ApeKI GCWGC 2 cut(s) 77, 227
AsuHPI GGTGA 2 cut(s) 36, 178
BalI TGGCCA 2 cut(s) 108, 327
BbvI GCAGC 2 cut(s) 89, 239
BccI CCATC 1 cut(s) 55
BceAI ACGGC 1 cut(s) 284
BciT130I CCWGG 1 cut(s) 6
BcoDI GTCTC 1 cut(s) 397
BisI GCNGC 2 cut(s) 78, 228
BlsI GCNGC 2 cut(s) 79, 229
Bme1390I CCNGG 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 6
BmsI GCATC 5 cut(s) 89, 214, 279, 286, 406
BplI GAGNNNNNCTC 2 cut(s) 26, 58
BpmI CTGGAG 1 cut(s) 105
BpuEI CTTGAG 1 cut(s) 386
Bsa29I ATCGAT 1 cut(s) 258
BsaJI CCNNGG 2 cut(s) 123, 322
BsaXI ACNNNNNCTCC 2 cut(s) 48, 78
Bsc4I CCNNNNNNNGG 1 cut(s) 53
Bse1I ACTGG 1 cut(s) 109
Bse3DI GCAATG 1 cut(s) 426
BseBI CCWGG 1 cut(s) 6
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 2 cut(s) 123, 322
BseGI GGATG 3 cut(s) 229, 351, 421
BseLI CCNNNNNNNGG 1 cut(s) 53
BseMI GCAATG 1 cut(s) 426
BseNI ACTGG 1 cut(s) 109
BseXI GCAGC 2 cut(s) 89, 239
BshFI GGCC 2 cut(s) 108, 327
BshVI ATCGAT 1 cut(s) 258
BslI CCNNNNNNNGG 1 cut(s) 53
BsmAI GTCTC 1 cut(s) 397
BsnI GGCC 2 cut(s) 108, 327
Bsp1407I TGTACA 1 cut(s) 382
Bsp143I GATC 3 cut(s) 168, 348, 397
Bsp19I CCATGG 1 cut(s) 123
BspACI CCGC 1 cut(s) 342
BspANI GGCC 2 cut(s) 108, 327
BspDI ATCGAT 1 cut(s) 258
BspPI GGATC 1 cut(s) 163
BsrDI GCAATG 1 cut(s) 426
BsrGI TGTACA 1 cut(s) 382
BsrI ACTGG 1 cut(s) 109
BssECI CCNNGG 2 cut(s) 123, 322
BssMI GATC 3 cut(s) 168, 348, 397
BssT1I CCWWGG 1 cut(s) 123
Bst2UI CCWGG 1 cut(s) 6
Bst4CI ACNGT 1 cut(s) 357
BstAUI TGTACA 1 cut(s) 382
BstDEI CTNAG 1 cut(s) 48
BstDSI CCRYGG 2 cut(s) 123, 322
BstENI CCTNNNNNAGG 1 cut(s) 51
BstF5I GGATG 3 cut(s) 229, 351, 421
BstKTI GATC 3 cut(s) 171, 351, 400
BstMAI GTCTC 1 cut(s) 397
BstMBI GATC 3 cut(s) 168, 348, 397
BstMWI GCNNNNNNNGC 1 cut(s) 86
BstNI CCWGG 1 cut(s) 6
BstSCI CCNGG 1 cut(s) 4
BstV1I GCAGC 2 cut(s) 89, 239
BstXI CCANNNNNNTGG 1 cut(s) 124
Bsu15I ATCGAT 1 cut(s) 258
BsuRI GGCC 2 cut(s) 108, 327
BsuTUI ATCGAT 1 cut(s) 258
BtgI CCRYGG 2 cut(s) 123, 322
BtsCI GGATG 3 cut(s) 229, 351, 421
CaiI CAGNNNCTG 1 cut(s) 83
ClaI ATCGAT 1 cut(s) 258
Csp6I GTAC 3 cut(s) 241, 358, 383
CviAII CATG 2 cut(s) 124, 313
CviJI RGCY 5 cut(s) 37, 108, 230, 327, 373
CviKI_1 RGCY 5 cut(s) 37, 108, 230, 327, 373
CviQI GTAC 3 cut(s) 241, 358, 383
DdeI CTNAG 1 cut(s) 48
DpnI GATC 3 cut(s) 170, 350, 399
DpnII GATC 3 cut(s) 168, 348, 397
EaeI YGGCCR 2 cut(s) 106, 325
Eco130I CCWWGG 1 cut(s) 123
Eco57I CTGAAG 2 cut(s) 270, 396
EcoNI CCTNNNNNAGG 1 cut(s) 51
EcoRII CCWGG 1 cut(s) 4
EcoT14I CCWWGG 1 cut(s) 123
ErhI CCWWGG 1 cut(s) 123
FaeI CATG 2 cut(s) 127, 316
FatI CATG 2 cut(s) 123, 312
FauI CCCGC 1 cut(s) 335
Fnu4HI GCNGC 2 cut(s) 78, 228
FokI GGATG 3 cut(s) 236, 358, 428
Fsp4HI GCNGC 2 cut(s) 78, 228
GluI GCNGC 2 cut(s) 78, 228
GsuI CTGGAG 1 cut(s) 105
HaeIII GGCC 2 cut(s) 108, 327
Hin1II CATG 2 cut(s) 127, 316
HincII GTYRAC 1 cut(s) 98
HindII GTYRAC 1 cut(s) 98
HinfI GANTC 2 cut(s) 212, 318
HphI GGTGA 2 cut(s) 36, 178
Hpy166II GTNNAC 2 cut(s) 98, 383
Hpy188I TCNGA 3 cut(s) 143, 397, 415
Hpy188III TCNNGA 2 cut(s) 84, 248
Hpy8I GTNNAC 2 cut(s) 98, 383
HpyAV CCTTC 2 cut(s) 245, 371
HpyCH4III ACNGT 1 cut(s) 357
HpyCH4V TGCA 3 cut(s) 227, 335, 419
HpyF10VI GCNNNNNNNGC 1 cut(s) 86
HpyF3I CTNAG 1 cut(s) 48
Hsp92II CATG 2 cut(s) 127, 316
Kzo9I GATC 3 cut(s) 168, 348, 397
LmnI GCTCC 1 cut(s) 86
LpnPI CCDG 6 cut(s) 9, 18, 69, 122, 261, 387
Lsp1109I GCAGC 2 cut(s) 89, 239
LweI GCATC 5 cut(s) 89, 214, 279, 286, 406
MalI GATC 3 cut(s) 170, 350, 399
MboI GATC 3 cut(s) 168, 348, 397
MboII GAAGA 1 cut(s) 221
MlsI TGGCCA 2 cut(s) 108, 327
MluCI AATT 2 cut(s) 9, 199
MluNI TGGCCA 2 cut(s) 108, 327
MmeI TCCRAC 2 cut(s) 130, 196
MnlI CCTC 2 cut(s) 184, 401
Mox20I TGGCCA 2 cut(s) 108, 327
MscI TGGCCA 2 cut(s) 108, 327
MseI TTAA 1 cut(s) 436
Msp20I TGGCCA 2 cut(s) 108, 327
MspR9I CCNGG 1 cut(s) 6
MvaI CCWGG 1 cut(s) 6
MwoI GCNNNNNNNGC 1 cut(s) 86
NcoI CCATGG 1 cut(s) 123
NdeII GATC 3 cut(s) 168, 348, 397
NlaIII CATG 2 cut(s) 127, 316
PfeI GAWTC 2 cut(s) 212, 318
PkrI GCNGC 2 cut(s) 79, 229
PsiI TTATAA 1 cut(s) 204
Psp6I CCWGG 1 cut(s) 4
PspGI CCWGG 1 cut(s) 4
PstNI CAGNNNCTG 1 cut(s) 83
RsaI GTAC 3 cut(s) 242, 359, 384
RsaNI GTAC 3 cut(s) 241, 358, 383
SaqAI TTAA 1 cut(s) 436
SatI GCNGC 2 cut(s) 78, 228
Sau3AI GATC 3 cut(s) 168, 348, 397
ScrFI CCNGG 1 cut(s) 6
SfaNI GCATC 5 cut(s) 89, 214, 279, 286, 406
SmlI CTYRAG 1 cut(s) 365
SmoI CTYRAG 1 cut(s) 365
Sse9I AATT 2 cut(s) 9, 199
SsiI CCGC 1 cut(s) 342
StyD4I CCNGG 1 cut(s) 4
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 1 cut(s) 357
TaqI TCGA 1 cut(s) 258
TasI AATT 2 cut(s) 9, 199
TatI WGTACW 2 cut(s) 357, 382
TfiI GAWTC 2 cut(s) 212, 318
Tru1I TTAA 1 cut(s) 436
Tru9I TTAA 1 cut(s) 436
TseI GCWGC 2 cut(s) 77, 227
TspGWI ACGGA 1 cut(s) 311
XagI CCTNNNNNAGG 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.