Rorug01G0051300

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
8353198 .. 8353847
650 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0051300.1

Sequence Viewer

Length: 264 bp
ATGGGCCAGCTACTATTCCTCAGAGAAAGGCTACAGGGGACAGCTACTATTCTATTGAAAGTGTTTCTGGCTAAGCATAACAAGAATTCTGAGAATTCAAGGCATGGAGTTGAAGAAGTTGGGAGCTACCAATTGCGAAAAAAGAATTCCAACAAACCTCAAGGTTTTGTTGATGTTTCAATCCACATTTCTGAGGATGTGGAAGGGAGAAGCTCATACACAGGAAATGAGGGAGGACCTGAGGATCACAGCAATACGACCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

9.68

Weight (kDa)

6.91

Isoelectric Point (pI)

53.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 252
AcsI RAATTY 3 cut(s) 85, 94, 145
AgsI TTSAA 4 cut(s) 58, 99, 113, 180
AluBI AGCT 4 cut(s) 10, 44, 126, 213
AluI AGCT 4 cut(s) 10, 44, 126, 213
AlwI GGATC 1 cut(s) 252
AoxI GGCC 1 cut(s) 4
ApoI RAATTY 3 cut(s) 85, 94, 145
AspS9I GGNCC 2 cut(s) 4, 236
AvaII GGWCC 1 cut(s) 236
AxyI CCTNAGG 1 cut(s) 240
BfmI CTRYAG 1 cut(s) 32
BlpI GCTNAGC 1 cut(s) 72
Bme18I GGWCC 1 cut(s) 236
BmgT120I GGNCC 2 cut(s) 4, 236
Bpu1102I GCTNAGC 1 cut(s) 72
BpuEI CTTGAG 1 cut(s) 144
Bse21I CCTNAGG 1 cut(s) 240
BseGI GGATG 1 cut(s) 202
BseMII CTCAG 4 cut(s) 34, 81, 183, 231
BshFI GGCC 1 cut(s) 6
BslFI GGGAC 1 cut(s) 52
BsmFI GGGAC 1 cut(s) 52
BsnI GGCC 1 cut(s) 6
Bsp143I GATC 1 cut(s) 244
Bsp1720I GCTNAGC 1 cut(s) 72
BspANI GGCC 1 cut(s) 6
BspCNI CTCAG 4 cut(s) 33, 82, 184, 232
BspPI GGATC 1 cut(s) 252
BssMI GATC 1 cut(s) 244
BstC8I GCNNGC 1 cut(s) 8
BstDEI CTNAG 5 cut(s) 20, 72, 90, 192, 240
BstF5I GGATG 1 cut(s) 202
BstKTI GATC 1 cut(s) 247
BstMBI GATC 1 cut(s) 244
BstSFI CTRYAG 1 cut(s) 32
Bsu36I CCTNAGG 1 cut(s) 240
BsuRI GGCC 1 cut(s) 6
BtsCI GGATG 1 cut(s) 202
Cac8I GCNNGC 1 cut(s) 8
Cfr13I GGNCC 2 cut(s) 4, 236
CviAII CATG 1 cut(s) 104
CviJI RGCY 7 cut(s) 6, 10, 31, 44, 71, 126, 213
CviKI_1 RGCY 7 cut(s) 6, 10, 31, 44, 71, 126, 213
DdeI CTNAG 5 cut(s) 20, 72, 90, 192, 240
DpnI GATC 1 cut(s) 246
DpnII GATC 1 cut(s) 244
Eco47I GGWCC 1 cut(s) 236
Eco81I CCTNAGG 1 cut(s) 240
EcoO109I RGGNCCY 1 cut(s) 236
EcoRI GAATTC 3 cut(s) 85, 94, 145
FaeI CATG 1 cut(s) 107
FaiI YATR 3 cut(s) 78, 105, 217
FaqI GGGAC 1 cut(s) 52
FatI CATG 1 cut(s) 103
FokI GGATG 1 cut(s) 209
HaeIII GGCC 1 cut(s) 6
Hin1II CATG 1 cut(s) 107
Hpy188I TCNGA 3 cut(s) 23, 91, 193
HpyAV CCTTC 1 cut(s) 197
HpyF3I CTNAG 5 cut(s) 20, 72, 90, 192, 240
Hsp92II CATG 1 cut(s) 107
Kzo9I GATC 1 cut(s) 244
LmnI GCTCC 1 cut(s) 123
LpnPI CCDG 5 cut(s) 20, 20, 53, 207, 252
MalI GATC 1 cut(s) 246
MboI GATC 1 cut(s) 244
MboII GAAGA 1 cut(s) 125
MfeI CAATTG 1 cut(s) 131
MluCI AATT 4 cut(s) 85, 94, 131, 145
MmeI TCCRAC 1 cut(s) 174
MnlI CCTC 6 cut(s) 29, 168, 187, 223, 227, 235
MunI CAATTG 1 cut(s) 131
NdeII GATC 1 cut(s) 244
NlaIII CATG 1 cut(s) 107
PpuMI RGGWCCY 1 cut(s) 236
Psp5II RGGWCCY 1 cut(s) 236
PspPI GGNCC 2 cut(s) 4, 236
PspPPI RGGWCCY 1 cut(s) 236
Sau3AI GATC 1 cut(s) 244
Sau96I GGNCC 2 cut(s) 4, 236
SetI ASST 8 cut(s) 12, 46, 128, 160, 166, 215, 241, 263
SfcI CTRYAG 1 cut(s) 32
SgeI CNNG 9 cut(s) 19, 47, 80, 94, 111, 116, 173, 234, 251
SinI GGWCC 1 cut(s) 236
SmlI CTYRAG 1 cut(s) 159
SmoI CTYRAG 1 cut(s) 159
Sse9I AATT 4 cut(s) 85, 94, 131, 145
TasI AATT 4 cut(s) 85, 94, 131, 145
VpaK11BI GGWCC 1 cut(s) 236
XapI RAATTY 3 cut(s) 85, 94, 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.