pycom02g00120

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
71925 .. 73783
1859 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g00120.1

Sequence Viewer

Length: 603 bp
ATGACCGGGTGGGAAGAATACAGTCTCATCACTGCCACACAGGCCCTGTTTAAGATTCACGACACCGATGTCCAACTCTCTTACTATACTGGAATTCTAGGAACGCCTGGTATAACTGCTTATGCTGGTTTTCATGAGGTTTGCATGCCAAAGAACGGAGAGACAGTCTTTGTTTCTGCCGCATCTAGAGCAGTAGGTCAACTTGTTGGGCAATTCACAAAGTTGTTGGGTTGCTATGTTGTTGGGAGTGCTGGAAGCAAAGAAAAGGTTGATTTGCTGAGGAACAAGTTCGGGTTTGACGAGGCTTTCAATTATAAAGAAGAACCTAACTTGGATGCTGCCTTAAAAAGGTACTTTCCTGAAGGCATCGATATATACTTTGAAAATGTTGGGGGAAAGATGCTCGATGCAGTCCTGCTAAACATGAGGATGAATGGCCGAATCACAGTTTGTGGGATGATCTCGCAGTACAACCTTGAGCAGAAGGAAGGCGTGCATAATTTAACGTCAATGATCTCTAAACAGCTCCGTATGCAAGGTTTCGTGGCTTCTAGTTTCTATCATCTCTACGGGAAGTTTCTTGAAACAGTACTACCACCATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

201

Amino Acids

22.27

Weight (kDa)

6.09

Isoelectric Point (pI)

28.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_zinc_N PF00107 64 - 188 5.1e-22 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 315
AasI GACNNNNNNGTC 1 cut(s) 68
AciI CCGC 1 cut(s) 180
AcoI YGGCCR 1 cut(s) 436
AcsI RAATTY 1 cut(s) 93
AcuI CTGAAG 1 cut(s) 381
AfaI GTAC 3 cut(s) 353, 470, 591
AfiI CCNNNNNNNGG 2 cut(s) 155, 348
AgsI TTSAA 3 cut(s) 310, 383, 584
AjnI CCWGG 1 cut(s) 106
AluBI AGCT 1 cut(s) 526
AluI AGCT 1 cut(s) 526
Alw26I GTCTC 2 cut(s) 29, 155
AlwNI CAGNNNCTG 1 cut(s) 46
AoxI GGCC 2 cut(s) 42, 436
ApeKI GCWGC 1 cut(s) 338
ApoI RAATTY 1 cut(s) 93
Asp700I GAANNNNTTC 1 cut(s) 287
AspS9I GGNCC 1 cut(s) 43
AsuC2I CCSGG 1 cut(s) 7
BbvCI CCTCAGC 1 cut(s) 278
BbvI GCAGC 1 cut(s) 325
BciT130I CCWGG 1 cut(s) 108
BcnI CCSGG 1 cut(s) 7
BcoDI GTCTC 2 cut(s) 29, 155
BfaI CTAG 3 cut(s) 98, 186, 552
BglI GCCNNNNNGGC 1 cut(s) 41
BisI GCNGC 2 cut(s) 180, 339
BlsI GCNGC 2 cut(s) 181, 340
BmcAI AGTACT 1 cut(s) 591
Bme1390I CCNGG 2 cut(s) 7, 108
BmgT120I GGNCC 1 cut(s) 43
BmrFI CCNGG 2 cut(s) 7, 108
BmsI GCATC 5 cut(s) 191, 325, 375, 390, 397
Bpu10I CCTNAGC 1 cut(s) 278
BpuEI CTTGAG 1 cut(s) 497
BpuMI CCSGG 1 cut(s) 7
Bsa29I ATCGAT 1 cut(s) 369
BsaXI ACNNNNNCTCC 2 cut(s) 150, 180
Bsc4I CCNNNNNNNGG 2 cut(s) 155, 348
Bse1I ACTGG 1 cut(s) 94
BseBI CCWGG 1 cut(s) 108
BseCI ATCGAT 1 cut(s) 369
BseGI GGATG 3 cut(s) 340, 435, 462
BseLI CCNNNNNNNGG 2 cut(s) 155, 348
BseMII CTCAG 1 cut(s) 269
BseNI ACTGG 1 cut(s) 94
BseXI GCAGC 1 cut(s) 325
BshFI GGCC 2 cut(s) 44, 438
BshVI ATCGAT 1 cut(s) 369
BsiSI CCGG 1 cut(s) 6
BslI CCNNNNNNNGG 2 cut(s) 155, 348
BsmAI GTCTC 2 cut(s) 29, 155
BsnI GGCC 2 cut(s) 44, 438
Bsp143I GATC 2 cut(s) 459, 513
BspACI CCGC 1 cut(s) 180
BspANI GGCC 2 cut(s) 44, 438
BspCNI CTCAG 1 cut(s) 270
BspDI ATCGAT 1 cut(s) 369
BspHI TCATGA 1 cut(s) 133
BsrI ACTGG 1 cut(s) 94
BssMI GATC 2 cut(s) 459, 513
Bst2UI CCWGG 1 cut(s) 108
Bst4CI ACNGT 4 cut(s) 23, 166, 448, 589
BstC8I GCNNGC 2 cut(s) 146, 494
BstDEI CTNAG 1 cut(s) 278
BstENI CCTNNNNNAGG 1 cut(s) 346
BstF5I GGATG 3 cut(s) 340, 435, 462
BstKTI GATC 2 cut(s) 462, 516
BstMAI GTCTC 2 cut(s) 29, 155
BstMBI GATC 2 cut(s) 459, 513
BstMWI GCNNNNNNNGC 3 cut(s) 41, 188, 532
BstNI CCWGG 1 cut(s) 108
BstNSI RCATGY 1 cut(s) 148
BstSCI CCNGG 2 cut(s) 5, 106
BstV1I GCAGC 1 cut(s) 325
Bsu15I ATCGAT 1 cut(s) 369
BsuRI GGCC 2 cut(s) 44, 438
BsuTUI ATCGAT 1 cut(s) 369
BtsCI GGATG 3 cut(s) 340, 435, 462
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 1 cut(s) 30
Cac8I GCNNGC 2 cut(s) 146, 494
CaiI CAGNNNCTG 1 cut(s) 46
CciI TCATGA 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 43
ClaI ATCGAT 1 cut(s) 369
Csp6I GTAC 3 cut(s) 352, 469, 590
CviAII CATG 3 cut(s) 134, 145, 424
CviJI RGCY 5 cut(s) 44, 305, 438, 526, 548
CviKI_1 RGCY 5 cut(s) 44, 305, 438, 526, 548
CviQI GTAC 3 cut(s) 352, 469, 590
DdeI CTNAG 1 cut(s) 278
DpnI GATC 2 cut(s) 461, 515
DpnII GATC 2 cut(s) 459, 513
DrdI GACNNNNNNGTC 1 cut(s) 68
DseDI GACNNNNNNGTC 1 cut(s) 68
EaeI YGGCCR 1 cut(s) 436
Eco57I CTGAAG 1 cut(s) 381
EcoNI CCTNNNNNAGG 1 cut(s) 346
EcoO109I RGGNCCY 1 cut(s) 43
EcoRI GAATTC 1 cut(s) 93
EcoRII CCWGG 1 cut(s) 106
FaeI CATG 3 cut(s) 137, 148, 427
FatI CATG 3 cut(s) 133, 144, 423
Fnu4HI GCNGC 2 cut(s) 180, 339
FokI GGATG 3 cut(s) 347, 442, 469
Fsp4HI GCNGC 2 cut(s) 180, 339
FspBI CTAG 3 cut(s) 98, 186, 552
GluI GCNGC 2 cut(s) 180, 339
HaeIII GGCC 2 cut(s) 44, 438
HapII CCGG 1 cut(s) 6
Hin1II CATG 3 cut(s) 137, 148, 427
HincII GTYRAC 1 cut(s) 200
HindII GTYRAC 1 cut(s) 200
HinfI GANTC 2 cut(s) 55, 441
HpaII CCGG 1 cut(s) 6
Hpy166II GTNNAC 1 cut(s) 200
Hpy188III TCNNGA 5 cut(s) 59, 134, 186, 359, 581
Hpy8I GTNNAC 1 cut(s) 200
HpyAV CCTTC 3 cut(s) 356, 478, 482
HpyCH4III ACNGT 4 cut(s) 23, 166, 448, 589
HpyCH4IV ACGT 1 cut(s) 506
HpyCH4V TGCA 4 cut(s) 144, 410, 496, 535
HpyF10VI GCNNNNNNNGC 3 cut(s) 41, 188, 532
HpyF3I CTNAG 1 cut(s) 278
HpySE526I ACGT 1 cut(s) 506
Hsp92II CATG 3 cut(s) 137, 148, 427
Kzo9I GATC 2 cut(s) 459, 513
LmnI GCTCC 1 cut(s) 531
Lsp1109I GCAGC 1 cut(s) 325
LweI GCATC 5 cut(s) 191, 325, 375, 390, 397
MaeI CTAG 3 cut(s) 98, 186, 552
MaeII ACGT 1 cut(s) 506
MalI GATC 2 cut(s) 461, 515
MboI GATC 2 cut(s) 459, 513
MboII GAAGA 2 cut(s) 26, 332
MluCI AATT 4 cut(s) 93, 212, 310, 499
MmeI TCCRAC 1 cut(s) 97
MnlI CCTC 4 cut(s) 130, 273, 295, 420
MroXI GAANNNNTTC 1 cut(s) 287
MseI TTAA 3 cut(s) 51, 344, 503
MslI CAYNNNNRTG 1 cut(s) 428
MspI CCGG 1 cut(s) 6
MspR9I CCNGG 2 cut(s) 7, 108
MvaI CCWGG 1 cut(s) 108
MwoI GCNNNNNNNGC 3 cut(s) 41, 188, 532
NciI CCSGG 1 cut(s) 7
NdeII GATC 2 cut(s) 459, 513
NlaIII CATG 3 cut(s) 137, 148, 427
NspI RCATGY 1 cut(s) 148
PaeI GCATGC 1 cut(s) 148
PagI TCATGA 1 cut(s) 133
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 287
PfeI GAWTC 2 cut(s) 55, 441
PkrI GCNGC 2 cut(s) 181, 340
PsiI TTATAA 1 cut(s) 315
Psp6I CCWGG 1 cut(s) 106
PspGI CCWGG 1 cut(s) 106
PspPI GGNCC 1 cut(s) 43
PstNI CAGNNNCTG 1 cut(s) 46
RsaI GTAC 3 cut(s) 353, 470, 591
RsaNI GTAC 3 cut(s) 352, 469, 590
RseI CAYNNNNRTG 1 cut(s) 428
SaqAI TTAA 3 cut(s) 51, 344, 503
SatI GCNGC 2 cut(s) 180, 339
Sau3AI GATC 2 cut(s) 459, 513
Sau96I GGNCC 1 cut(s) 43
ScaI AGTACT 1 cut(s) 591
ScrFI CCNGG 2 cut(s) 7, 108
SetI ASST 9 cut(s) 141, 199, 270, 328, 353, 477, 509, 528, 541
SfaNI GCATC 5 cut(s) 191, 325, 375, 390, 397
SmiMI CAYNNNNRTG 1 cut(s) 428
SmlI CTYRAG 1 cut(s) 476
SmoI CTYRAG 1 cut(s) 476
SphI GCATGC 1 cut(s) 148
Sse9I AATT 4 cut(s) 93, 212, 310, 499
SsiI CCGC 1 cut(s) 180
SspMI CTAG 3 cut(s) 98, 186, 552
StyD4I CCNGG 2 cut(s) 5, 106
TaaI ACNGT 4 cut(s) 23, 166, 448, 589
TaiI ACGT 1 cut(s) 509
TaqI TCGA 2 cut(s) 369, 405
TasI AATT 4 cut(s) 93, 212, 310, 499
TatI WGTACW 2 cut(s) 468, 589
TauI GCSGC 1 cut(s) 182
TfiI GAWTC 2 cut(s) 55, 441
Tru1I TTAA 3 cut(s) 51, 344, 503
Tru9I TTAA 3 cut(s) 51, 344, 503
TscAI CASTG 1 cut(s) 37
TseI GCWGC 1 cut(s) 338
TspDTI ATGAA 2 cut(s) 122, 446
TspGWI ACGGA 2 cut(s) 171, 518
TspRI CASTG 1 cut(s) 37
XagI CCTNNNNNAGG 1 cut(s) 346
XapI RAATTY 1 cut(s) 93
XbaI TCTAGA 1 cut(s) 185
XceI RCATGY 1 cut(s) 148
XmnI GAANNNNTTC 1 cut(s) 287
XspI CTAG 3 cut(s) 98, 186, 552
ZrmI AGTACT 1 cut(s) 591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.