RchiOBHm_Chr2g0084771

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000196
Physical Location & Seq
Forward (+)
443622 .. 443927
306 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46034

Sequence Viewer

Length: 306 bp
ATGGAGGAAGTGAGTAACAAGCAGGTGTTATTGAAGGAGCATCTTACGAGTGGGAATCCTACCGAAGGCGTTCAAAACTTGATGTACATGATTGGGAATCGGATGCGCATGGAGGGATTCATAGTCGCTGATCACTTTCACCTCTATCCAAAGTATCTTGAATTGGTGATACCTTACATCAAAGAAGGCAAAATAGTGTCTGTGGAAGACGTGGCCGACGGCATTGACAATGCTCCCGCTGCTCTCGTAGGCCTCTTCGCCGGACGCAACGTTGGAAAGCAACTTGTTTTAGTTTCCCGCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

101

Amino Acids

11.24

Weight (kDa)

5.55

Isoelectric Point (pI)

23.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
Acc16I TGCGCA 1 cut(s) 107
Acc36I ACCTGC 1 cut(s) 13
AccII CGCG 1 cut(s) 300
AciI CCGC 2 cut(s) 237, 298
AclI AACGTT 1 cut(s) 270
AcoI YGGCCR 1 cut(s) 213
AfaI GTAC 1 cut(s) 86
AfiI CCNNNNNNNGG 1 cut(s) 65
AgsI TTSAA 3 cut(s) 34, 74, 161
AjiI CACGTC 1 cut(s) 211
AoxI GGCC 2 cut(s) 213, 250
ApeKI GCWGC 1 cut(s) 239
Asp700I GAANNNNTTC 1 cut(s) 69
AspLEI GCGC 1 cut(s) 108
AsuHPI GGTGA 2 cut(s) 131, 178
BbsI GAAGAC 1 cut(s) 213
BbvI GCAGC 1 cut(s) 226
BceAI ACGGC 1 cut(s) 235
BclI TGATCA 1 cut(s) 130
BfuAI ACCTGC 1 cut(s) 13
BisI GCNGC 1 cut(s) 240
BlsI GCNGC 1 cut(s) 241
BmgBI CACGTC 1 cut(s) 211
BmsI GCATC 2 cut(s) 49, 93
BpiI GAAGAC 1 cut(s) 213
Bsc4I CCNNNNNNNGG 1 cut(s) 65
BseGI GGATG 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 65
BseXI GCAGC 1 cut(s) 226
Bsh1236I CGCG 1 cut(s) 300
BshFI GGCC 2 cut(s) 215, 252
BsiSI CCGG 1 cut(s) 261
BslI CCNNNNNNNGG 1 cut(s) 65
BsnI GGCC 2 cut(s) 215, 252
Bsp1407I TGTACA 1 cut(s) 84
Bsp143I GATC 1 cut(s) 130
BspACI CCGC 2 cut(s) 237, 298
BspANI GGCC 2 cut(s) 215, 252
BspFNI CGCG 1 cut(s) 300
BspMI ACCTGC 1 cut(s) 13
BsrGI TGTACA 1 cut(s) 84
BssMI GATC 1 cut(s) 130
Bst6I CTCTTC 1 cut(s) 260
BstAUI TGTACA 1 cut(s) 84
BstENI CCTNNNNNAGG 1 cut(s) 63
BstF5I GGATG 1 cut(s) 108
BstFNI CGCG 1 cut(s) 300
BstHHI GCGC 1 cut(s) 108
BstKTI GATC 1 cut(s) 133
BstMBI GATC 1 cut(s) 130
BstMWI GCNNNNNNNGC 1 cut(s) 239
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 1 cut(s) 226
BstV2I GAAGAC 1 cut(s) 213
BsuRI GGCC 2 cut(s) 215, 252
BtrI CACGTC 1 cut(s) 211
BtsCI GGATG 1 cut(s) 108
BveI ACCTGC 1 cut(s) 13
CfoI GCGC 1 cut(s) 108
CseI GACGC 1 cut(s) 273
Csp6I GTAC 1 cut(s) 85
CviAII CATG 2 cut(s) 88, 109
CviJI RGCY 2 cut(s) 215, 252
CviKI_1 RGCY 2 cut(s) 215, 252
CviQI GTAC 1 cut(s) 85
DpnI GATC 1 cut(s) 132
DpnII GATC 1 cut(s) 130
EaeI YGGCCR 1 cut(s) 213
Eam1104I CTCTTC 1 cut(s) 260
EarI CTCTTC 1 cut(s) 260
Eco147I AGGCCT 1 cut(s) 252
EcoNI CCTNNNNNAGG 1 cut(s) 63
FaeI CATG 2 cut(s) 91, 112
FaiI YATR 3 cut(s) 89, 110, 122
FatI CATG 2 cut(s) 87, 108
FauI CCCGC 1 cut(s) 244
FbaI TGATCA 1 cut(s) 130
Fnu4HI GCNGC 1 cut(s) 240
FokI GGATG 1 cut(s) 115
Fsp4HI GCNGC 1 cut(s) 240
FspAI RTGCGCAY 1 cut(s) 107
FspI TGCGCA 1 cut(s) 107
GlaI GCGC 1 cut(s) 107
GluI GCNGC 1 cut(s) 240
HaeIII GGCC 2 cut(s) 215, 252
HapII CCGG 1 cut(s) 261
HgaI GACGC 1 cut(s) 273
HhaI GCGC 1 cut(s) 108
Hin1II CATG 2 cut(s) 91, 112
Hin6I GCGC 1 cut(s) 106
HinP1I GCGC 1 cut(s) 106
HinfI GANTC 3 cut(s) 55, 97, 117
HpaII CCGG 1 cut(s) 261
HphI GGTGA 2 cut(s) 131, 178
Hpy188I TCNGA 1 cut(s) 102
Hpy188III TCNNGA 1 cut(s) 158
Hpy99I CGWCG 1 cut(s) 221
HpyAV CCTTC 3 cut(s) 28, 59, 179
HpyCH4IV ACGT 2 cut(s) 210, 270
HpyF10VI GCNNNNNNNGC 1 cut(s) 239
HpySE526I ACGT 2 cut(s) 210, 270
Hsp92II CATG 2 cut(s) 91, 112
HspAI GCGC 1 cut(s) 106
Ksp22I TGATCA 1 cut(s) 130
Kzo9I GATC 1 cut(s) 130
LmnI GCTCC 2 cut(s) 37, 238
LpnPI CCDG 2 cut(s) 8, 274
Lsp1109I GCAGC 1 cut(s) 226
LweI GCATC 2 cut(s) 49, 93
MaeII ACGT 2 cut(s) 210, 270
MaeIII GTNAC 1 cut(s) 14
MalI GATC 1 cut(s) 132
MboI GATC 1 cut(s) 130
MboII GAAGA 2 cut(s) 218, 247
MluCI AATT 1 cut(s) 161
MmeI TCCRAC 1 cut(s) 253
MnlI CCTC 3 cut(s) 106, 152, 263
MroXI GAANNNNTTC 1 cut(s) 69
MspA1I CMGCKG 1 cut(s) 239
MspI CCGG 1 cut(s) 261
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 1 cut(s) 239
NdeII GATC 1 cut(s) 130
NlaIII CATG 2 cut(s) 91, 112
NsbI TGCGCA 1 cut(s) 107
PaqCI CACCTGC 1 cut(s) 13
PceI AGGCCT 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 69
PfeI GAWTC 3 cut(s) 55, 97, 117
PkrI GCNGC 1 cut(s) 241
Psp1406I AACGTT 1 cut(s) 270
RsaI GTAC 1 cut(s) 86
RsaNI GTAC 1 cut(s) 85
SatI GCNGC 1 cut(s) 240
Sau3AI GATC 1 cut(s) 130
SetI ASST 5 cut(s) 27, 144, 175, 213, 273
SfaNI GCATC 2 cut(s) 49, 93
Sse9I AATT 1 cut(s) 161
SseBI AGGCCT 1 cut(s) 252
SsiI CCGC 2 cut(s) 237, 298
StuI AGGCCT 1 cut(s) 252
TaiI ACGT 2 cut(s) 213, 273
TasI AATT 1 cut(s) 161
TatI WGTACW 1 cut(s) 84
TfiI GAWTC 3 cut(s) 55, 97, 117
TseI GCWGC 1 cut(s) 239
TspDTI ATGAA 1 cut(s) 109
XagI CCTNNNNNAGG 1 cut(s) 63
XmnI GAANNNNTTC 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.