Rorug02G0335000

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
41695987 .. 41698547
2561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0335000.1

Sequence Viewer

Length: 2340 bp
ATGTCTTCTGAGCAACTTAGGAGGGAGAATGTGACGCCCCAGAGGGAAGTTCACATTGAGAAAGACAAGGTGCCGAAGATTGCCAGCCACTTCGAGTCAATCACCGTGCATGTGCAAGAAGCCGGCGACAAAGACACGCCTATGGACAAAGACACGCCTATGGACAGCACCAAAGACTCGCACGTCGATAAAGAGCGGAAGGGAAACACCGTTGGGGACTTGGGGATGGGAAAATCCAGAGACAGGATGAGTGAGTCGAATGCAGATAGGGCTAGGACGGCGAATATGGTGGCGGATAAAGAAGCTGAGGAGAAGAGAGGGAGGGAGAGTGGTGCCCGCGGAGTAGGGAAGTTTGAGGTTCAAGAAAGTGATGAGGGTCGGAAGAAGGGAGGTAGAGAGGAAATGGTTGTTGTGAGTGAAGGGAAGGAGGATTCAAGGGTGAGACAAGGTGGGGGTGAAATGGAAGGCAGAAACATGGACATAATGGGCAGAGAGAGTAAGAGTGGAGCTCATCAAGGTGTCGGAAAGGTCGAAGTTATAAGGGCTGGGGAAGAGAAGGGCAGAGAGGGTCAAGGTAGACAGCAAATGAGTTCTAAAGGAAGGGAGGGCGAGGGTAGAGAAAGTGAAGGTGGGAGCACACAAATGATGGGCAAAGGAGAGGGTATGACACAAGAGAGAGGAATGGACACGGAGATGATGAGAAGCAAAGAGGAGGGTCGCGGCCGCGAGCAGAGACAAGGCACAGAAACGGAGAGCAATGTGAACAAGCAGCAGCAGCAACAACGACAACAACAACCATCTCTGGAAGAAGTTTCGGCATTTAGACAAACAGCACAGCAGAATTCCATGGTGGCAATAAGGGCCGCAGAAGAGCGATATCAGAAAGCTAAAGAAACTGCAAACCAGACACTCGCTACTACAACCGAGAAGACTAAAGAAACAGCTCTGAAGGCTAAAGAAACTGCAAGCAAGACACTCGCTACTACAACCGAGAAGGCTAAAGAAACAGCCCAGAAAGCTAAAGAGACTGCCAGTACTGCTACCGAGAAGGCTAAGGAAATTTCAAGCCAGACACTTGGTACTGCAACTGAGAAAGGAGCACAAGTGAAAGACATAGCACTGGAAAAAGGCCAACAAGGATTATATGCAGCAAAAGATACTCTATCAAGTGCAGGGAAGAAAACGGTGGATAACACGGTGCCATTAGCAGAGAAAACTAAAGACATGGCCGTGTCTGCGGGTAAGACTACTCTGCATTATGCTGGTGATGTTGCGGTGGATTTGAAGGACAAGGCGACTGTGGCAGGTTGGACTGCGGCGCACTACACAACTGAGGCAGCAGTGGAGGGAACCAAAGCAGCTGCAAGAGTAGTTTCCGGAGCAGCAGGCTATGCTGGTCATAAGGCGGTGGATATTGTGTCCAAGCCTTTGAGTGTTGCTAAAGATGCTGCTGTGGTGACTGGTGAGAAAGCTGAGGAGTTCACTGCTCGGAAGAAGGAAGAGGCGAAAAGAGAATATGAGGCCAAGAAAGCAGCTGAAGCAAATAGGCCCAAGGGTTCTGAGACTACGTATCAAGGAGGAGAATCCAAAAGCTGGAAGCAAGAGGAGACATGGACGAAACCAGTTGAGAGGGAATGTCAGCATATGCAGAGAGAAGGTGGCAGACCAACTGAAAAAACCAGCCAAGAAACCGCTGAATTACAAAGGGAGGGAGCGCAAGAGGGCGGTGCTGGGGTGCTGGGAACAATCGGCGGGACTTTGGGTGTGATACCGGGAGCTGTTAGTGAGACATTGGTTGAGATAGCTGAGAATACGAAAAACTTTGTTATTGGGCAGGGTGAAAGTGGAATGGGTGAGGAGGGCGAGGAAGGGTGGAGCTCAAATGCGCAGCAAGGAGGGCAGGAATGGAGCTCAAATGCGCAGCAAGGAGGGCAGGAATGGAGCTCAAATGCACAGCAAGGAGGGCAGGGGTGGAGGCCATCTGAGAAGCAAGGCAGGCAGGAGGGGAGGTCATCTGAGAAGCGTGGCAAGCAGAGCGAGACTGTAAGTGTAATACCGGGAGCTGTCGGCGAAACTTTGATTGAGATAGCTCAGACTACAAAAGACAACGTCATCGGGCAGGGGCAAAGCGCAGAGGAGAGTGCTGAGAAGGATCGCAGGTCATCTGATCAGCAGCAAGGCTTAGGTGCAATACCTCGTGCTGTTGGGGAGACTATGGTTGGAATAGCTCAGACAACAAAAGACAATGTTGACAATATTACTGGGCTTAGGCAGAGACAGGGACAGGGACAGTCGAGAACTGATCAGCAGCAGGGATGGAAGCAAGACCAGACCAAATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

779

Amino Acids

84.09

Weight (kDa)

5.87

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 539
AasI GACNNNNNNGTC 1 cut(s) 182
Acc16I TGCGCA 2 cut(s) 1887, 1920
Acc36I ACCTGC 2 cut(s) 1295, 2148
AccB1I GGYRCC 3 cut(s) 70, 332, 1198
AccB7I CCANNNNNTGG 1 cut(s) 1593
AccBSI CCGCTC 1 cut(s) 196
AccI GTMKAC 1 cut(s) 577
AccII CGCG 3 cut(s) 339, 720, 726
AccIII TCCGGA 1 cut(s) 1376
AclWI GGATC 1 cut(s) 2160
AcoI YGGCCR 2 cut(s) 721, 1227
AcsI RAATTY 2 cut(s) 841, 1059
AcuI CTGAAG 2 cut(s) 968, 1557
AcyI GRCGYC 1 cut(s) 35
AfaI GTAC 2 cut(s) 1036, 1081
AfiI CCNNNNNNNGG 2 cut(s) 243, 1593
AgsI TTSAA 4 cut(s) 362, 435, 1065, 1285
AjiI CACGTC 1 cut(s) 184
Alw21I GWGCWC 6 cut(s) 511, 638, 1102, 1880, 1913, 1946
AlwI GGATC 1 cut(s) 2160
Aor13HI TCCGGA 1 cut(s) 1376
AoxI GGCC 7 cut(s) 721, 861, 1129, 1227, 1521, 1547, 1976
ApoI RAATTY 2 cut(s) 841, 1059
AspLEI GCGC 5 cut(s) 1321, 1717, 1888, 1921, 2132
AspS9I GGNCC 2 cut(s) 861, 1548
AsuC2I CCSGG 2 cut(s) 1773, 2058
AsuHPI GGTGA 8 cut(s) 94, 451, 467, 1277, 1468, 1475, 1850, 1865
BaeGI GKGCMC 1 cut(s) 337
BanI GGYRCC 3 cut(s) 70, 332, 1198
BanII GRGCYC 4 cut(s) 511, 1880, 1913, 1946
BauI CACGAG 1 cut(s) 2196
BbsI GAAGAC 1 cut(s) 935
Bbv12I GWGCWC 6 cut(s) 511, 638, 1102, 1880, 1913, 1946
BbvCI CCTCAGC 2 cut(s) 306, 1473
BccI CCATC 5 cut(s) 220, 640, 805, 1987, 2310
BceAI ACGGC 2 cut(s) 294, 1214
BcgI CGANNNNNNTGC 2 cut(s) 958, 992
BclI TGATCA 2 cut(s) 2167, 2302
BcnI CCSGG 2 cut(s) 1773, 2058
BfaI CTAG 1 cut(s) 273
BfuAI ACCTGC 2 cut(s) 1295, 2148
BmcAI AGTACT 1 cut(s) 1036
Bme1390I CCNGG 2 cut(s) 1773, 2058
BmgBI CACGTC 1 cut(s) 184
BmgT120I GGNCC 2 cut(s) 861, 1548
BmiI GGNNCC 4 cut(s) 72, 334, 1200, 1351
BmrFI CCNGG 2 cut(s) 1773, 2058
BmrI ACTGGG 1 cut(s) 2271
BmsI GCATC 1 cut(s) 1435
BmuI ACTGGG 1 cut(s) 2271
BpiI GAAGAC 1 cut(s) 935
BplI GAGNNNNNCTC 2 cut(s) 493, 525
Bpu10I CCTNAGC 5 cut(s) 306, 1053, 1473, 2182, 2267
BpuMI CCSGG 2 cut(s) 1773, 2058
BsaAI YACGTR 1 cut(s) 1569
BsaHI GRCGYC 1 cut(s) 35
BsaJI CCNNGG 3 cut(s) 337, 846, 1551
BsaWI WCCGGW 1 cut(s) 1376
BsaXI ACNNNNNCTCC 6 cut(s) 313, 343, 1089, 1119, 1994, 2024
Bsc4I CCNNNNNNNGG 2 cut(s) 243, 1593
Bse118I RCCGGY 1 cut(s) 122
Bse1I ACTGG 5 cut(s) 1032, 1125, 1465, 1622, 2266
Bse3DI GCAATG 1 cut(s) 763
BseAI TCCGGA 1 cut(s) 1376
BseDI CCNNGG 3 cut(s) 337, 846, 1551
BseGI GGATG 3 cut(s) 231, 252, 2321
BseLI CCNNNNNNNGG 2 cut(s) 243, 1593
BseMI GCAATG 1 cut(s) 763
BseNI ACTGG 5 cut(s) 1032, 1125, 1465, 1622, 2266
BseRI GAGGAG 7 cut(s) 323, 725, 1490, 1593, 1619, 1871, 2150
BseSI GKGCMC 1 cut(s) 337
BseX3I CGGCCG 1 cut(s) 721
BseYI CCCAGC 3 cut(s) 545, 1730, 1738
BsgI GTGCAG 1 cut(s) 1191
Bsh1236I CGCG 3 cut(s) 339, 720, 726
Bsh1285I CGRYCG 1 cut(s) 724
BshFI GGCC 7 cut(s) 723, 863, 1131, 1229, 1523, 1549, 1978
BshNI GGYRCC 3 cut(s) 70, 332, 1198
BsiEI CGRYCG 1 cut(s) 724
BsiHKAI GWGCWC 6 cut(s) 511, 638, 1102, 1880, 1913, 1946
BsiSI CCGG 4 cut(s) 123, 1377, 1772, 2057
BslFI GGGAC 4 cut(s) 230, 1768, 2295, 2301
BslI CCNNNNNNNGG 2 cut(s) 243, 1593
BsmFI GGGAC 4 cut(s) 230, 1768, 2295, 2301
BsmI GAATGC 1 cut(s) 265
BsnI GGCC 7 cut(s) 723, 863, 1131, 1229, 1523, 1549, 1978
Bsp1286I GDGCHC 7 cut(s) 337, 511, 638, 1102, 1880, 1913, 1946
Bsp13I TCCGGA 1 cut(s) 1376
Bsp143I GATC 3 cut(s) 2152, 2167, 2302
Bsp19I CCATGG 1 cut(s) 846
BspANI GGCC 7 cut(s) 723, 863, 1131, 1229, 1523, 1549, 1978
BspEI TCCGGA 1 cut(s) 1376
BspFNI CGCG 3 cut(s) 339, 720, 726
BspLI GGNNCC 4 cut(s) 72, 334, 1200, 1351
BspMI ACCTGC 2 cut(s) 1295, 2148
BspPI GGATC 1 cut(s) 2160
BspQI GCTCTTC 1 cut(s) 864
BspT107I GGYRCC 3 cut(s) 70, 332, 1198
BsrBI CCGCTC 1 cut(s) 196
BsrDI GCAATG 1 cut(s) 763
BsrFI RCCGGY 1 cut(s) 122
BsrI ACTGG 5 cut(s) 1032, 1125, 1465, 1622, 2266
BssAI RCCGGY 1 cut(s) 122
BssECI CCNNGG 3 cut(s) 337, 846, 1551
BssMI GATC 3 cut(s) 2152, 2167, 2302
BssNI GRCGYC 1 cut(s) 35
BssSI CACGAG 1 cut(s) 2196
BssT1I CCWWGG 2 cut(s) 846, 1551
Bst2BI CACGAG 1 cut(s) 2196
Bst4CI ACNGT 7 cut(s) 106, 211, 1186, 1198, 1300, 2044, 2292
Bst6I CTCTTC 4 cut(s) 308, 546, 864, 1494
BstACI GRCGYC 1 cut(s) 35
BstAPI GCANNNNNTGC 1 cut(s) 1391
BstBAI YACGTR 1 cut(s) 1569
BstC8I GCNNGC 8 cut(s) 85, 124, 337, 728, 967, 1387, 1997, 2030
BstDSI CCRYGG 2 cut(s) 337, 846
BstF5I GGATG 3 cut(s) 231, 252, 2321
BstFNI CGCG 3 cut(s) 339, 720, 726
BstHHI GCGC 5 cut(s) 1321, 1717, 1888, 1921, 2132
BstKTI GATC 3 cut(s) 2155, 2170, 2305
BstMBI GATC 3 cut(s) 2152, 2167, 2302
BstMCI CGRYCG 1 cut(s) 724
BstNSI RCATGY 1 cut(s) 113
BstSCI CCNGG 2 cut(s) 1771, 2056
BstSLI GKGCMC 1 cut(s) 337
BstSNI TACGTA 1 cut(s) 1569
BstUI CGCG 3 cut(s) 339, 720, 726
BstV2I GAAGAC 1 cut(s) 935
BstXI CCANNNNNNTGG 1 cut(s) 1076
BstZI CGGCCG 1 cut(s) 721
BsuRI GGCC 7 cut(s) 723, 863, 1131, 1229, 1523, 1549, 1978
BtgI CCRYGG 2 cut(s) 337, 846
BtrI CACGTC 1 cut(s) 184
BtsCI GGATG 3 cut(s) 231, 252, 2321
BtsI GCAGTG 2 cut(s) 1347, 1482
BtsIMutI CAGTG 3 cut(s) 1118, 1347, 1482
BveI ACCTGC 2 cut(s) 1295, 2148
Cac8I GCNNGC 8 cut(s) 85, 124, 337, 728, 967, 1387, 1997, 2030
CciNI GCGGCCGC 1 cut(s) 721
CfoI GCGC 5 cut(s) 1321, 1717, 1888, 1921, 2132
Cfr10I RCCGGY 1 cut(s) 122
Cfr13I GGNCC 2 cut(s) 861, 1548
Cfr42I CCGCGG 1 cut(s) 340
CseI GACGC 1 cut(s) 43
Csp6I GTAC 2 cut(s) 1035, 1080
CviAII CATG 5 cut(s) 110, 475, 847, 1225, 1611
CviQI GTAC 2 cut(s) 1035, 1080
DpnI GATC 3 cut(s) 2154, 2169, 2304
DpnII GATC 3 cut(s) 2152, 2167, 2302
DrdI GACNNNNNNGTC 1 cut(s) 182
DseDI GACNNNNNNGTC 1 cut(s) 182
EaeI YGGCCR 2 cut(s) 721, 1227
EagI CGGCCG 1 cut(s) 721
Eam1104I CTCTTC 4 cut(s) 308, 546, 864, 1494
EarI CTCTTC 4 cut(s) 308, 546, 864, 1494
EciI GGCGGA 1 cut(s) 308
Ecl136II GAGCTC 4 cut(s) 509, 1878, 1911, 1944
EclXI CGGCCG 1 cut(s) 721
Eco105I TACGTA 1 cut(s) 1569
Eco130I CCWWGG 2 cut(s) 846, 1551
Eco24I GRGCYC 4 cut(s) 511, 1880, 1913, 1946
Eco32I GATATC 1 cut(s) 878
Eco52I CGGCCG 1 cut(s) 721
Eco53kI GAGCTC 4 cut(s) 509, 1878, 1911, 1944
Eco57I CTGAAG 2 cut(s) 968, 1557
EcoICRI GAGCTC 4 cut(s) 509, 1878, 1911, 1944
EcoRI GAATTC 1 cut(s) 841
EcoRV GATATC 1 cut(s) 878
EcoT14I CCWWGG 2 cut(s) 846, 1551
EcoT38I GRGCYC 4 cut(s) 511, 1880, 1913, 1946
ErhI CCWWGG 2 cut(s) 846, 1551
FaeI CATG 5 cut(s) 113, 478, 850, 1228, 1614
FaqI GGGAC 4 cut(s) 230, 1768, 2295, 2301
FatI CATG 5 cut(s) 109, 474, 846, 1224, 1610
FauI CCCGC 3 cut(s) 344, 1231, 1745
FauNDI CATATG 1 cut(s) 1644
FbaI TGATCA 2 cut(s) 2167, 2302
FblI GTMKAC 1 cut(s) 577
FokI GGATG 3 cut(s) 238, 259, 2328
FriOI GRGCYC 4 cut(s) 511, 1880, 1913, 1946
FspBI CTAG 1 cut(s) 273
FspI TGCGCA 2 cut(s) 1887, 1920
GlaI GCGC 5 cut(s) 1320, 1716, 1887, 1920, 2131
GsaI CCCAGC 3 cut(s) 549, 1734, 1742
HaeIII GGCC 7 cut(s) 723, 863, 1131, 1229, 1523, 1549, 1978
HapII CCGG 4 cut(s) 123, 1377, 1772, 2057
HgaI GACGC 1 cut(s) 43
HhaI GCGC 5 cut(s) 1321, 1717, 1888, 1921, 2132
Hin1I GRCGYC 1 cut(s) 35
Hin1II CATG 5 cut(s) 113, 478, 850, 1228, 1614
Hin6I GCGC 5 cut(s) 1319, 1715, 1886, 1919, 2130
HinP1I GCGC 5 cut(s) 1319, 1715, 1886, 1919, 2130
HincII GTYRAC 1 cut(s) 2251
HindII GTYRAC 1 cut(s) 2251
HinfI GANTC 5 cut(s) 95, 176, 254, 431, 1583
HpaII CCGG 4 cut(s) 123, 1377, 1772, 2057
HphI GGTGA 8 cut(s) 94, 451, 467, 1277, 1468, 1475, 1850, 1865
Hpy166II GTNNAC 5 cut(s) 52, 578, 763, 1482, 2251
Hpy188III TCNNGA 5 cut(s) 237, 362, 803, 1377, 2295
Hpy8I GTNNAC 5 cut(s) 52, 578, 763, 1482, 2251
Hpy99I CGWCG 1 cut(s) 188
HpyCH4III ACNGT 7 cut(s) 106, 211, 1186, 1198, 1300, 2044, 2292
HpyCH4IV ACGT 3 cut(s) 183, 1568, 2109
HpySE526I ACGT 3 cut(s) 183, 1568, 2109
Hsp92I GRCGYC 1 cut(s) 35
Hsp92II CATG 5 cut(s) 113, 478, 850, 1228, 1614
HspAI GCGC 5 cut(s) 1319, 1715, 1886, 1919, 2130
Kpn2I TCCGGA 1 cut(s) 1376
KroI GCCGGC 1 cut(s) 122
KroNI GCCGGC 1 cut(s) 124
Ksp22I TGATCA 2 cut(s) 2167, 2302
KspI CCGCGG 1 cut(s) 340
Kzo9I GATC 3 cut(s) 2152, 2167, 2302
LguI GCTCTTC 1 cut(s) 864
LweI GCATC 1 cut(s) 1435
MaeI CTAG 1 cut(s) 273
MaeII ACGT 3 cut(s) 183, 1568, 2109
MaeIII GTNAC 2 cut(s) 31, 1456
MalI GATC 3 cut(s) 2154, 2169, 2304
MbiI CCGCTC 1 cut(s) 196
MboI GATC 3 cut(s) 2152, 2167, 2302
MhlI GDGCHC 7 cut(s) 337, 511, 638, 1102, 1880, 1913, 1946
MluCI AATT 3 cut(s) 841, 1059, 1697
MlyI GAGTC 3 cut(s) 104, 170, 263
MmeI TCCRAC 4 cut(s) 359, 502, 1289, 2200
MroI TCCGGA 1 cut(s) 1376
MroNI GCCGGC 1 cut(s) 122
MslI CAYNNNNRTG 6 cut(s) 140, 158, 516, 641, 692, 1229
MspA1I CMGCKG 4 cut(s) 339, 1361, 1535, 1694
MspI CCGG 4 cut(s) 123, 1377, 1772, 2057
MspR9I CCNGG 2 cut(s) 1773, 2058
Mva1269I GAATGC 1 cut(s) 265
MvnI CGCG 3 cut(s) 339, 720, 726
NaeI GCCGGC 1 cut(s) 124
NciI CCSGG 2 cut(s) 1773, 2058
NcoI CCATGG 1 cut(s) 846
NdeI CATATG 1 cut(s) 1644
NdeII GATC 3 cut(s) 2152, 2167, 2302
NgoMIV GCCGGC 1 cut(s) 122
NlaIII CATG 5 cut(s) 113, 478, 850, 1228, 1614
NlaIV GGNNCC 4 cut(s) 72, 334, 1200, 1351
NmuCI GTSAC 2 cut(s) 31, 1456
NotI GCGGCCGC 1 cut(s) 721
NsbI TGCGCA 2 cut(s) 1887, 1920
NspI RCATGY 1 cut(s) 113
PciSI GCTCTTC 1 cut(s) 864
PcsI WCGNNNNNNNCGW 1 cut(s) 528
PctI GAATGC 1 cut(s) 265
PdiI GCCGGC 1 cut(s) 124
PfeI GAWTC 2 cut(s) 431, 1583
PflFI GACNNNGTC 1 cut(s) 2108
PflMI CCANNNNNTGG 1 cut(s) 1593
PleI GAGTC 3 cut(s) 103, 170, 262
PpsI GAGTC 3 cut(s) 103, 170, 262
Ppu21I YACGTR 1 cut(s) 1569
PsiI TTATAA 1 cut(s) 539
Psp124BI GAGCTC 4 cut(s) 511, 1880, 1913, 1946
PspFI CCCAGC 3 cut(s) 545, 1730, 1738
PspN4I GGNNCC 4 cut(s) 72, 334, 1200, 1351
PspPI GGNCC 2 cut(s) 861, 1548
PsyI GACNNNGTC 1 cut(s) 2108
PvuII CAGCTG 2 cut(s) 1361, 1535
RsaI GTAC 2 cut(s) 1036, 1081
RsaNI GTAC 2 cut(s) 1035, 1080
RseI CAYNNNNRTG 6 cut(s) 140, 158, 516, 641, 692, 1229
SacI GAGCTC 4 cut(s) 511, 1880, 1913, 1946
SacII CCGCGG 1 cut(s) 340
SapI GCTCTTC 1 cut(s) 864
Sau3AI GATC 3 cut(s) 2152, 2167, 2302
Sau96I GGNCC 2 cut(s) 861, 1548
ScaI AGTACT 1 cut(s) 1036
SchI GAGTC 3 cut(s) 104, 170, 263
ScrFI CCNGG 2 cut(s) 1773, 2058
SduI GDGCHC 7 cut(s) 337, 511, 638, 1102, 1880, 1913, 1946
SfaNI GCATC 1 cut(s) 1435
Sfr303I CCGCGG 1 cut(s) 340
SgrBI CCGCGG 1 cut(s) 340
SmiMI CAYNNNNRTG 6 cut(s) 140, 158, 516, 641, 692, 1229
SnaBI TACGTA 1 cut(s) 1569
Sse9I AATT 3 cut(s) 841, 1059, 1697
SspI AATATT 1 cut(s) 2257
SspMI CTAG 1 cut(s) 273
SstI GAGCTC 4 cut(s) 511, 1880, 1913, 1946
StyD4I CCNGG 2 cut(s) 1771, 2056
StyI CCWWGG 2 cut(s) 846, 1551
TaaI ACNGT 7 cut(s) 106, 211, 1186, 1198, 1300, 2044, 2292
TaiI ACGT 3 cut(s) 186, 1571, 2112
TaqI TCGA 5 cut(s) 93, 186, 257, 531, 2294
TasI AATT 3 cut(s) 841, 1059, 1697
TatI WGTACW 1 cut(s) 1034
TauI GCSGC 4 cut(s) 723, 726, 866, 1319
TfiI GAWTC 2 cut(s) 431, 1583
TscAI CASTG 3 cut(s) 1125, 1347, 1489
TseFI GTSAC 2 cut(s) 31, 1456
Tsp45I GTSAC 2 cut(s) 31, 1456
TspGWI ACGGA 2 cut(s) 704, 764
TspRI CASTG 3 cut(s) 1125, 1347, 1489
Tth111I GACNNNGTC 1 cut(s) 2108
Van91I CCANNNNNTGG 1 cut(s) 1593
XapI RAATTY 2 cut(s) 841, 1059
XceI RCATGY 1 cut(s) 113
XmiI GTMKAC 1 cut(s) 577
XspI CTAG 1 cut(s) 273
ZrmI AGTACT 1 cut(s) 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.