Rorug01G0455700

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
55002025 .. 55005977
3953 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0455700.1

Sequence Viewer

Length: 1743 bp
ATGGCTCAGGTGGTGGCTATGAGAGCGATTCAGAGCTCGATCCTGTGCCCCGGGTCCGGATCCGCCCAGGGACGGAGCTCCGATAAGCTCAAGCCGCCGAGCTTCGCTTCCAGAGTTCTGGCGAATGAGGAGAAGAAGAGCACCAGCCGGAAAGTGGTCGGCGGCAGAAGGATGAGGTCTGAGATCGCCGCCAAGCGGCCGTTACAGACCGAGGTCGTTCCGATGTCGCCCGAGGACTTGCCCAAGATAGAGGAGCAATTCCAGCAATTACAGACGATTCAGCAATATGGTGACACTTCAGTGGGGATGTGGTCAAAGCCAACAGTGAGACGTAAGACCAAGATTGTGTGCACAATTGGTCCTTCCACCAACACTCGTGAAATGATCTGGAAGTTGGCTGAGGCGGGGATGAATGTTGCGCGGATGAATATGTCCCACGGAGATCATGCGTCTCATCAGAAGGTTATTGACTTGGTTAAGGAATATAATGAGCAATCCAAGGACAATGTCATTGCAATCATGCTTGATACCAAGGGCCCTGAGGTTAGGAGTGGTGATCTGCCCCAGCCAATTAATTTGGCCCCTGGGCAGGAATTTACTTTTACGATTCAGAGAGGGGTTGGAACAGCAGAGTGTGTTAGTGTGAACTATGATGATTTTGTTAATGATGTGGAAGTGGGTGACATGCTTCTGGTTGATGGTGGTATGATGTCATTTTTGGTGAAGTCCAAGACAGCAGACTCAGTGAAATGTGAAGTTGTCGATGGAGGAGAACTTAAGTCTAGGCGGCACTTGAATGTGCGAGGGAAAAGTGCAACATTGGCTTCTATCACTGAGAAAGATTGGGAAGATATCAAATTTGGAGTGGATAATAAAGTTGACTTCTATGCAGTTTCGTTTGTTAAAGATGCAGAAGTTGTTCATGAATTGAAGAATTATCTGCGAAGCTGTAATGCGGATATACATGTTATTGTAAAAATTGAAAGTGCAGACTCGATCCCAAATTTGCATTCGATTATCACAGCATCTGATGGGGCCATGGTTGCAAGAGGAGATCTTGGTGCAGAACTCCCTGTTGAAGAGGTCCCACTTCTGCAGGAAGAGATAATCAGGCTATGCCGTAGCATGGGGAAGGCTGTTATTGTTGCAACAAATATGCTTGAGAGCATGATTGTTCACCCAACCCCAACCAGAGCTGAGGTATCAGACATTGCCATTGCTGTCCGGGAGGGTGCTGATGCAGTTATGCTTTCGGGAGAAACTGCTAATGGAAAGTATCCGCTGAAAGCCGTGAAAGTTATGCACACTGTTGCTCTGCGGACAGAGGCAACCGTCGCAGGTGGCCACATGCCAGCCAATCTTGGCAAAGCTTTTAAGAATCATATGAGCGAGATGTTTGCTTACCATGCAACCATGATGTCCAATACTCTTGGAACCTCAATCGTCGTGTTCACTAGATCTGGTTTCATGGCTATTCTATTGAGCCATTTTCGTCCTTCTGGGACAATATTTGCTTTTACAAACGATAAGAGGATACAACAGAGACTGGCTCTGTATGAAGGTGTATGTCCCATATACATGGAGTTTGTAGATGATGCTGAAAAAAGCTTCACTAATGCCTTGGCCGTGCTGCAGAAGCAAGGAATGGTAAAGGCAGGAGAAGAGGTCGCACTCGTTCAGAGTGGCAGACAGCCCATTTGGCGGCTCCAGTCCACTCACAATATTCAAGTGCGCAAAGTCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

580

Amino Acids

63.65

Weight (kDa)

7.65

Isoelectric Point (pI)

47.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK PF00224 111 - 431 1.7e-111 Pyruvate kinase, barrel domain
PK_C PF02887 467 - 560 4.3e-18 Pyruvate kinase, alpha/beta domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1328
Acc16I TGCGCA 1 cut(s) 1733
Acc36I ACCTGC 1 cut(s) 1328
AccII CGCG 1 cut(s) 421
AccIII TCCGGA 1 cut(s) 56
AclWI GGATC 4 cut(s) 34, 54, 67, 991
AcoI YGGCCR 3 cut(s) 197, 1342, 1623
AcsI RAATTY 3 cut(s) 593, 857, 1003
AcuI CTGAAG 1 cut(s) 282
AfiI CCNNNNNNNGG 7 cut(s) 56, 72, 154, 195, 589, 1126, 1701
AflII CTTAAG 1 cut(s) 776
AflIII ACRYGT 1 cut(s) 964
AgsI TTSAA 5 cut(s) 796, 931, 983, 1079, 1727
AjnI CCWGG 2 cut(s) 66, 583
AjuI GAANNNNNNNTTGG 2 cut(s) 994, 1026
AleI CACNNNNGTG 1 cut(s) 299
AluBI AGCT 8 cut(s) 36, 78, 88, 102, 948, 1196, 1370, 1608
AluI AGCT 8 cut(s) 36, 78, 88, 102, 948, 1196, 1370, 1608
Alw21I GWGCWC 4 cut(s) 38, 80, 143, 353
Alw26I GTCTC 3 cut(s) 322, 456, 1537
Alw44I GTGCAC 1 cut(s) 349
AlwI GGATC 4 cut(s) 34, 54, 67, 991
AlwNI CAGNNNCTG 2 cut(s) 1028, 1546
Ama87I CYCGRG 2 cut(s) 50, 230
Aor13HI TCCGGA 1 cut(s) 56
AoxI GGCC 6 cut(s) 197, 535, 579, 1035, 1342, 1623
ApaI GGGCCC 1 cut(s) 539
ApaLI GTGCAC 1 cut(s) 349
ApeKI GCWGC 1 cut(s) 1630
ApoI RAATTY 3 cut(s) 593, 857, 1003
ArsI GACNNNNNNTTYG 2 cut(s) 1680, 1712
AseI ATTAAT 1 cut(s) 573
Asp700I GAANNNNTTC 1 cut(s) 918
AspLEI GCGC 2 cut(s) 421, 1734
AspS9I GGNCC 7 cut(s) 54, 359, 535, 536, 580, 1035, 1084
AsuC2I CCSGG 3 cut(s) 51, 52, 1226
AsuHPI GGTGA 5 cut(s) 302, 566, 692, 733, 1169
AvaI CYCGRG 2 cut(s) 50, 230
AvaII GGWCC 3 cut(s) 54, 359, 1084
AxyI CCTNAGG 1 cut(s) 540
BaeGI GKGCMC 3 cut(s) 50, 353, 539
BalI TGGCCA 1 cut(s) 1344
BamHI GGATCC 1 cut(s) 59
BanII GRGCYC 3 cut(s) 38, 80, 539
BauI CACGAG 1 cut(s) 375
Bbv12I GWGCWC 4 cut(s) 38, 80, 143, 353
BbvCI CCTCAGC 2 cut(s) 399, 1197
BbvI GCAGC 1 cut(s) 1617
BccI CCATC 3 cut(s) 692, 758, 1025
BceAI ACGGC 4 cut(s) 184, 1104, 1274, 1610
BcgI CGANNNNNNTGC 2 cut(s) 1379, 1413
BciT130I CCWGG 2 cut(s) 68, 585
BciVI GTATCC 2 cut(s) 1287, 1527
BcnI CCSGG 3 cut(s) 51, 52, 1226
BcoDI GTCTC 3 cut(s) 322, 456, 1537
BfaI CTAG 3 cut(s) 783, 1455, 1741
BfmI CTRYAG 2 cut(s) 1094, 1631
BfrI CTTAAG 1 cut(s) 776
BfuAI ACCTGC 1 cut(s) 1328
BfuI GTATCC 2 cut(s) 1287, 1527
BglI GCCNNNNNGGC 1 cut(s) 1699
BglII AGATCT 2 cut(s) 1054, 1457
BisI GCNGC 7 cut(s) 95, 163, 189, 197, 788, 1631, 1703
BlsI GCNGC 7 cut(s) 96, 164, 190, 198, 789, 1632, 1704
Bme1390I CCNGG 5 cut(s) 51, 52, 68, 585, 1226
Bme18I GGWCC 3 cut(s) 54, 359, 1084
BmeT110I CYCGRG 2 cut(s) 50, 230
BmgT120I GGNCC 7 cut(s) 54, 359, 535, 536, 580, 1035, 1084
BmiI GGNNCC 8 cut(s) 55, 61, 537, 582, 1036, 1086, 1435, 1706
BmrFI CCNGG 5 cut(s) 51, 52, 68, 585, 1226
BmsI GCATC 4 cut(s) 898, 1034, 1228, 1585
BoxI GACNNNNGTC 1 cut(s) 212
BplI GAGNNNNNCTC 2 cut(s) 1534, 1566
BpmI CTGGAG 1 cut(s) 1691
Bpu10I CCTNAGC 3 cut(s) 6, 399, 1197
BpuEI CTTGAG 2 cut(s) 74, 1181
BpuMI CCSGG 3 cut(s) 51, 52, 1226
BsaWI WCCGGW 1 cut(s) 56
BsaXI ACNNNNNCTCC 2 cut(s) 1650, 1680
Bsc4I CCNNNNNNNGG 7 cut(s) 56, 72, 154, 195, 589, 1126, 1701
Bse1I ACTGG 2 cut(s) 1551, 1708
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 3 cut(s) 510, 1209, 1215
BseAI TCCGGA 1 cut(s) 56
BseBI CCWGG 2 cut(s) 68, 585
BseGI GGATG 4 cut(s) 177, 312, 414, 429
BseLI CCNNNNNNNGG 7 cut(s) 56, 72, 154, 195, 589, 1126, 1701
BseMI GCAATG 3 cut(s) 510, 1209, 1215
BseMII CTCAG 7 cut(s) 20, 171, 390, 531, 756, 825, 1188
BseNI ACTGG 2 cut(s) 1551, 1708
BseRI GAGGAG 4 cut(s) 143, 266, 783, 1065
BseSI GKGCMC 3 cut(s) 50, 353, 539
BseX3I CGGCCG 1 cut(s) 197
BseXI GCAGC 1 cut(s) 1617
BseYI CCCAGC 1 cut(s) 564
BsgI GTGCAG 2 cut(s) 1008, 1083
Bsh1236I CGCG 1 cut(s) 421
Bsh1285I CGRYCG 1 cut(s) 200
BshFI GGCC 6 cut(s) 199, 537, 581, 1037, 1344, 1625
BsiEI CGRYCG 1 cut(s) 200
BsiHKAI GWGCWC 4 cut(s) 38, 80, 143, 353
BsiHKCI CYCGRG 2 cut(s) 50, 230
BsiSI CCGG 4 cut(s) 51, 57, 148, 1225
BslFI GGGAC 5 cut(s) 84, 418, 1070, 1516, 1554
BslI CCNNNNNNNGG 7 cut(s) 56, 72, 154, 195, 589, 1126, 1701
BsmAI GTCTC 3 cut(s) 322, 456, 1537
BsmBI CGTCTC 2 cut(s) 322, 456
BsmFI GGGAC 5 cut(s) 84, 418, 1070, 1516, 1554
BsmI GAATGC 1 cut(s) 1009
BsnI GGCC 6 cut(s) 199, 537, 581, 1037, 1344, 1625
BsoBI CYCGRG 2 cut(s) 50, 230
Bsp120I GGGCCC 1 cut(s) 535
Bsp1286I GDGCHC 6 cut(s) 38, 50, 80, 143, 353, 539
Bsp13I TCCGGA 1 cut(s) 56
Bsp143I GATC 9 cut(s) 39, 59, 183, 384, 442, 556, 996, 1054, 1457
Bsp19I CCATGG 1 cut(s) 1038
BspANI GGCC 6 cut(s) 199, 537, 581, 1037, 1344, 1625
BspCNI CTCAG 7 cut(s) 19, 172, 391, 532, 755, 826, 1189
BspEI TCCGGA 1 cut(s) 56
BspFNI CGCG 1 cut(s) 421
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 8 cut(s) 55, 61, 537, 582, 1036, 1086, 1435, 1706
BspMAI CTGCAG 2 cut(s) 1098, 1635
BspMI ACCTGC 1 cut(s) 1328
BspPI GGATC 4 cut(s) 34, 54, 67, 991
BspQI GCTCTTC 1 cut(s) 131
BspTI CTTAAG 1 cut(s) 776
BsrDI GCAATG 3 cut(s) 510, 1209, 1215
BsrI ACTGG 2 cut(s) 1551, 1708
BssMI GATC 9 cut(s) 39, 59, 183, 384, 442, 556, 996, 1054, 1457
BssSI CACGAG 1 cut(s) 375
BssT1I CCWWGG 4 cut(s) 498, 531, 1038, 1620
Bst2BI CACGAG 1 cut(s) 375
Bst2UI CCWGG 2 cut(s) 68, 585
Bst4CI ACNGT 3 cut(s) 325, 1309, 1333
Bst6I CTCTTC 4 cut(s) 131, 1074, 1095, 1656
BstAFI CTTAAG 1 cut(s) 776
BstC8I GCNNGC 1 cut(s) 1353
BstDEI CTNAG 7 cut(s) 6, 180, 399, 540, 742, 834, 1197
BstDSI CCRYGG 2 cut(s) 436, 1038
BstF5I GGATG 4 cut(s) 177, 312, 414, 429
BstFNI CGCG 1 cut(s) 421
BstHHI GCGC 2 cut(s) 421, 1734
BstKTI GATC 9 cut(s) 42, 62, 186, 387, 445, 559, 999, 1057, 1460
BstMAI GTCTC 3 cut(s) 322, 456, 1537
BstMBI GATC 9 cut(s) 39, 59, 183, 384, 442, 556, 996, 1054, 1457
BstMCI CGRYCG 1 cut(s) 200
BstMWI GCNNNNNNNGC 9 cut(s) 23, 94, 262, 821, 1043, 1334, 1406, 1636, 1699
BstNI CCWGG 2 cut(s) 68, 585
BstNSI RCATGY 3 cut(s) 688, 968, 1351
BstPAI GACNNNNGTC 1 cut(s) 212
BstSCI CCNGG 5 cut(s) 49, 50, 66, 583, 1224
BstSFI CTRYAG 2 cut(s) 1094, 1631
BstSLI GKGCMC 3 cut(s) 50, 353, 539
BstUI CGCG 1 cut(s) 421
BstV1I GCAGC 1 cut(s) 1617
BstX2I RGATCY 3 cut(s) 59, 1054, 1457
BstXI CCANNNNNNTGG 2 cut(s) 118, 1579
BstYI RGATCY 3 cut(s) 59, 1054, 1457
BstZI CGGCCG 1 cut(s) 197
Bsu36I CCTNAGG 1 cut(s) 540
BsuI GTATCC 2 cut(s) 1287, 1527
BsuRI GGCC 6 cut(s) 199, 537, 581, 1037, 1344, 1625
BtgI CCRYGG 2 cut(s) 436, 1038
BtsCI GGATG 4 cut(s) 177, 312, 414, 429
BtsIMutI CAGTG 5 cut(s) 306, 330, 750, 831, 1305
BveI ACCTGC 1 cut(s) 1328
Cac8I GCNNGC 1 cut(s) 1353
CaiI CAGNNNCTG 2 cut(s) 1028, 1546
CciI TCATGA 1 cut(s) 922
CfoI GCGC 2 cut(s) 421, 1734
Cfr13I GGNCC 7 cut(s) 54, 359, 535, 536, 580, 1035, 1084
Cfr9I CCCGGG 1 cut(s) 50
CseI GACGC 1 cut(s) 438
DdeI CTNAG 7 cut(s) 6, 180, 399, 540, 742, 834, 1197
DpnI GATC 9 cut(s) 41, 61, 185, 386, 444, 558, 998, 1056, 1459
DpnII GATC 9 cut(s) 39, 59, 183, 384, 442, 556, 996, 1054, 1457
EaeI YGGCCR 3 cut(s) 197, 1342, 1623
EagI CGGCCG 1 cut(s) 197
Eam1104I CTCTTC 4 cut(s) 131, 1074, 1095, 1656
EarI CTCTTC 4 cut(s) 131, 1074, 1095, 1656
EciI GGCGGA 1 cut(s) 52
Ecl136II GAGCTC 2 cut(s) 36, 78
EclXI CGGCCG 1 cut(s) 197
Eco130I CCWWGG 4 cut(s) 498, 531, 1038, 1620
Eco24I GRGCYC 3 cut(s) 38, 80, 539
Eco32I GATATC 1 cut(s) 853
Eco47I GGWCC 3 cut(s) 54, 359, 1084
Eco52I CGGCCG 1 cut(s) 197
Eco53kI GAGCTC 2 cut(s) 36, 78
Eco57I CTGAAG 1 cut(s) 282
Eco81I CCTNAGG 1 cut(s) 540
Eco88I CYCGRG 2 cut(s) 50, 230
EcoICRI GAGCTC 2 cut(s) 36, 78
EcoO109I RGGNCCY 3 cut(s) 535, 536, 1084
EcoRII CCWGG 2 cut(s) 66, 583
EcoRV GATATC 1 cut(s) 853
EcoT14I CCWWGG 4 cut(s) 498, 531, 1038, 1620
EcoT38I GRGCYC 3 cut(s) 38, 80, 539
ErhI CCWWGG 4 cut(s) 498, 531, 1038, 1620
Esp3I CGTCTC 2 cut(s) 322, 456
FaqI GGGAC 5 cut(s) 84, 418, 1070, 1516, 1554
FauI CCCGC 1 cut(s) 397
FauNDI CATATG 1 cut(s) 1383
Fnu4HI GCNGC 7 cut(s) 95, 163, 189, 197, 788, 1631, 1703
FokI GGATG 4 cut(s) 184, 319, 421, 436
FriOI GRGCYC 3 cut(s) 38, 80, 539
Fsp4HI GCNGC 7 cut(s) 95, 163, 189, 197, 788, 1631, 1703
FspBI CTAG 3 cut(s) 783, 1455, 1741
FspI TGCGCA 1 cut(s) 1733
GlaI GCGC 2 cut(s) 420, 1733
GluI GCNGC 7 cut(s) 95, 163, 189, 197, 788, 1631, 1703
GsaI CCCAGC 1 cut(s) 568
GsuI CTGGAG 1 cut(s) 1691
HaeIII GGCC 6 cut(s) 199, 537, 581, 1037, 1344, 1625
HapII CCGG 4 cut(s) 51, 57, 148, 1225
HgaI GACGC 1 cut(s) 438
HhaI GCGC 2 cut(s) 421, 1734
Hin6I GCGC 2 cut(s) 419, 1732
HinP1I GCGC 2 cut(s) 419, 1732
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HindIII AAGCTT 2 cut(s) 1368, 1606
HinfI GANTC 6 cut(s) 28, 277, 607, 740, 992, 1378
HpaII CCGG 4 cut(s) 51, 57, 148, 1225
HphI GGTGA 5 cut(s) 302, 566, 692, 733, 1169
Hpy166II GTNNAC 6 cut(s) 351, 646, 880, 1177, 1452, 1713
Hpy188I TCNGA 9 cut(s) 33, 82, 181, 222, 459, 612, 1030, 1207, 1680
Hpy188III TCNNGA 6 cut(s) 57, 111, 377, 388, 923, 1254
Hpy8I GTNNAC 6 cut(s) 351, 646, 880, 1177, 1452, 1713
Hpy99I CGWCG 2 cut(s) 1337, 1448
HpyAV CCTTC 6 cut(s) 162, 372, 454, 1126, 1506, 1553
HpyCH4III ACNGT 3 cut(s) 325, 1309, 1333
HpyCH4IV ACGT 1 cut(s) 331
HpyF10VI GCNNNNNNNGC 9 cut(s) 23, 94, 262, 821, 1043, 1334, 1406, 1636, 1699
HpyF3I CTNAG 7 cut(s) 6, 180, 399, 540, 742, 834, 1197
HpySE526I ACGT 1 cut(s) 331
HspAI GCGC 2 cut(s) 419, 1732
Kpn2I TCCGGA 1 cut(s) 56
Kzo9I GATC 9 cut(s) 39, 59, 183, 384, 442, 556, 996, 1054, 1457
LguI GCTCTTC 1 cut(s) 131
LmnI GCTCC 4 cut(s) 75, 83, 253, 1710
Lsp1109I GCAGC 1 cut(s) 1617
LweI GCATC 4 cut(s) 898, 1034, 1228, 1585
MaeI CTAG 3 cut(s) 783, 1455, 1741
MaeII ACGT 1 cut(s) 331
MaeIII GTNAC 3 cut(s) 201, 290, 680
MalI GATC 9 cut(s) 41, 61, 185, 386, 444, 558, 998, 1056, 1459
MboI GATC 9 cut(s) 39, 59, 183, 384, 442, 556, 996, 1054, 1457
MboII GAAGA 7 cut(s) 145, 148, 860, 943, 1091, 1112, 1673
MfeI CAATTG 1 cut(s) 354
MflI RGATCY 3 cut(s) 59, 1054, 1457
MhlI GDGCHC 6 cut(s) 38, 50, 80, 143, 353, 539
MlsI TGGCCA 1 cut(s) 1344
MluNI TGGCCA 1 cut(s) 1344
MlyI GAGTC 2 cut(s) 734, 986
MmeI TCCRAC 1 cut(s) 601
Mox20I TGGCCA 1 cut(s) 1344
MroI TCCGGA 1 cut(s) 56
MroXI GAANNNNTTC 1 cut(s) 918
MscI TGGCCA 1 cut(s) 1344
MseI TTAA 6 cut(s) 477, 573, 663, 777, 903, 1374
MslI CAYNNNNRTG 3 cut(s) 299, 795, 1577
Msp20I TGGCCA 1 cut(s) 1344
MspA1I CMGCKG 1 cut(s) 1282
MspCI CTTAAG 1 cut(s) 776
MspI CCGG 4 cut(s) 51, 57, 148, 1225
MspR9I CCNGG 5 cut(s) 51, 52, 68, 585, 1226
MunI CAATTG 1 cut(s) 354
Mva1269I GAATGC 1 cut(s) 1009
MvaI CCWGG 2 cut(s) 68, 585
MvnI CGCG 1 cut(s) 421
MwoI GCNNNNNNNGC 9 cut(s) 23, 94, 262, 821, 1043, 1334, 1406, 1636, 1699
NciI CCSGG 3 cut(s) 51, 52, 1226
NcoI CCATGG 1 cut(s) 1038
NdeI CATATG 1 cut(s) 1383
NdeII GATC 9 cut(s) 39, 59, 183, 384, 442, 556, 996, 1054, 1457
NlaIV GGNNCC 8 cut(s) 55, 61, 537, 582, 1036, 1086, 1435, 1706
NmeAIII GCCGAG 1 cut(s) 123
NmuCI GTSAC 2 cut(s) 290, 680
NsbI TGCGCA 1 cut(s) 1733
NspI RCATGY 3 cut(s) 688, 968, 1351
OliI CACNNNNGTG 1 cut(s) 299
PagI TCATGA 1 cut(s) 922
PaqCI CACCTGC 1 cut(s) 1328
PasI CCCWGGG 2 cut(s) 67, 584
PciI ACATGT 1 cut(s) 964
PciSI GCTCTTC 1 cut(s) 131
PctI GAATGC 1 cut(s) 1009
PdmI GAANNNNTTC 1 cut(s) 918
PfeI GAWTC 4 cut(s) 28, 277, 607, 1378
PflFI GACNNNGTC 1 cut(s) 506
PfoI TCCNGGA 1 cut(s) 1224
PkrI GCNGC 7 cut(s) 96, 164, 190, 198, 789, 1632, 1704
PleI GAGTC 2 cut(s) 734, 986
PpsI GAGTC 2 cut(s) 734, 986
PpuMI RGGWCCY 1 cut(s) 1084
PscI ACATGT 1 cut(s) 964
PshAI GACNNNNGTC 1 cut(s) 212
PshBI ATTAAT 1 cut(s) 573
Psp124BI GAGCTC 2 cut(s) 38, 80
Psp5II RGGWCCY 1 cut(s) 1084
Psp6I CCWGG 2 cut(s) 66, 583
PspFI CCCAGC 1 cut(s) 564
PspGI CCWGG 2 cut(s) 66, 583
PspN4I GGNNCC 8 cut(s) 55, 61, 537, 582, 1036, 1086, 1435, 1706
PspOMI GGGCCC 1 cut(s) 535
PspPI GGNCC 7 cut(s) 54, 359, 535, 536, 580, 1035, 1084
PspPPI RGGWCCY 1 cut(s) 1084
PstI CTGCAG 2 cut(s) 1098, 1635
PstNI CAGNNNCTG 2 cut(s) 1028, 1546
PsuI RGATCY 3 cut(s) 59, 1054, 1457
PsyI GACNNNGTC 1 cut(s) 506
RseI CAYNNNNRTG 3 cut(s) 299, 795, 1577
SacI GAGCTC 2 cut(s) 38, 80
SapI GCTCTTC 1 cut(s) 131
SaqAI TTAA 6 cut(s) 477, 573, 663, 777, 903, 1374
SatI GCNGC 7 cut(s) 95, 163, 189, 197, 788, 1631, 1703
Sau3AI GATC 9 cut(s) 39, 59, 183, 384, 442, 556, 996, 1054, 1457
Sau96I GGNCC 7 cut(s) 54, 359, 535, 536, 580, 1035, 1084
SchI GAGTC 2 cut(s) 734, 986
ScrFI CCNGG 5 cut(s) 51, 52, 68, 585, 1226
SduI GDGCHC 6 cut(s) 38, 50, 80, 143, 353, 539
SfaNI GCATC 4 cut(s) 898, 1034, 1228, 1585
SfcI CTRYAG 2 cut(s) 1094, 1631
SinI GGWCC 3 cut(s) 54, 359, 1084
SmaI CCCGGG 1 cut(s) 52
SmiMI CAYNNNNRTG 3 cut(s) 299, 795, 1577
SmlI CTYRAG 3 cut(s) 89, 776, 1160
SmoI CTYRAG 3 cut(s) 89, 776, 1160
SspI AATATT 2 cut(s) 1509, 1723
SspMI CTAG 3 cut(s) 783, 1455, 1741
SstI GAGCTC 2 cut(s) 38, 80
StyD4I CCNGG 5 cut(s) 49, 50, 66, 583, 1224
StyI CCWWGG 4 cut(s) 498, 531, 1038, 1620
TaaI ACNGT 3 cut(s) 325, 1309, 1333
TaiI ACGT 1 cut(s) 334
TaqI TCGA 4 cut(s) 38, 762, 995, 1013
TaqII GACCGA 1 cut(s) 224
TauI GCSGC 6 cut(s) 97, 165, 191, 199, 790, 1705
TfiI GAWTC 4 cut(s) 28, 277, 607, 1378
Tru1I TTAA 6 cut(s) 477, 573, 663, 777, 903, 1374
Tru9I TTAA 6 cut(s) 477, 573, 663, 777, 903, 1374
TscAI CASTG 5 cut(s) 306, 330, 750, 838, 1312
TseFI GTSAC 2 cut(s) 290, 680
TseI GCWGC 1 cut(s) 1630
Tsp45I GTSAC 2 cut(s) 290, 680
TspDTI ATGAA 6 cut(s) 425, 440, 911, 939, 1456, 1572
TspGWI ACGGA 2 cut(s) 88, 453
TspMI CCCGGG 1 cut(s) 50
TspRI CASTG 5 cut(s) 306, 330, 750, 838, 1312
Tth111I GACNNNGTC 1 cut(s) 506
Vha464I CTTAAG 1 cut(s) 776
VneI GTGCAC 1 cut(s) 349
VpaK11BI GGWCC 3 cut(s) 54, 359, 1084
VspI ATTAAT 1 cut(s) 573
XapI RAATTY 3 cut(s) 593, 857, 1003
XceI RCATGY 3 cut(s) 688, 968, 1351
XcmI CCANNNNNNNNNTGG 1 cut(s) 151
XmaI CCCGGG 1 cut(s) 50
XmnI GAANNNNTTC 1 cut(s) 918
XspI CTAG 3 cut(s) 783, 1455, 1741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.